RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 A6NDX4 124 aa4.94□□□□□ -1.62
CDH1-203ENST00000561751 INSP01308 110 aa4.94□□□□□ -1.62
CDH1-203ENST00000561751 IGLV6-57P01721 117 aa4.94□□□□□ -1.62
CDH1-203ENST00000561751 ASB16-AS1Q495Z4 193 aa4.94□□□□□ -1.62
CDH1-203ENST00000561751 C11orf71Q6IPW1 123 aa4.94□□□□□ -1.62
CDH1-203ENST00000561751 DIRC1Q969H9 104 aa4.94□□□□□ -1.62
CDH1-203ENST00000561751 HIGD2AQ9BW72 106 aa4.94□□□□□ -1.62
CDH1-203ENST00000561751 MXRA5Q9NR99 2828 aa4.94□□□□□ -1.62
CDH1-203ENST00000561751 ETDCA0A1B0GVM5 59 aa4.93□□□□□ -1.62
CDH1-203ENST00000561751 ZFP36P26651 326 aaKnown RBP4.93□□□□□ -1.62
CDH1-203ENST00000561751 Q5VV11 94 aa4.93□□□□□ -1.62
CDH1-203ENST00000561751 Q75L30 129 aa4.93□□□□□ -1.62
CDH1-203ENST00000561751 VPS13CQ709C8 3753 aa4.92□□□□□ -1.62
CDH1-203ENST00000561751 IGKV3-7A0A075B6H7 116 aa4.92□□□□□ -1.62
CDH1-203ENST00000561751 LINC00959A0A1B0GUT2 108 aa4.92□□□□□ -1.62
CDH1-203ENST00000561751 A6NN06 94 aa4.92□□□□□ -1.62
CDH1-203ENST00000561751 IGHV4-30-4P0DP06 118 aa4.92□□□□□ -1.62
CDH1-203ENST00000561751 DEFB113Q30KQ7 82 aa4.92□□□□□ -1.62
CDH1-203ENST00000561751 LCA10Q71F78 164 aa4.92□□□□□ -1.62
CDH1-203ENST00000561751 FBN1P35555 2871 aaKnown RBP4.92□□□□□ -1.62
CDH1-203ENST00000561751 TRGV2A0A075B6R0 118 aa4.91□□□□□ -1.62
CDH1-203ENST00000561751 M0R2N4 97 aa4.91□□□□□ -1.62
CDH1-203ENST00000561751 ZNF73O43830 326 aaPredicted RBP4.91□□□□□ -1.62
CDH1-203ENST00000561751 IGKV3-20P01619 116 aa4.91□□□□□ -1.62
CDH1-203ENST00000561751 HIGD2BQ4VC39 106 aa4.91□□□□□ -1.62
CDH1-203ENST00000561751 C7orf65Q6ZTY9 151 aa4.91□□□□□ -1.62
CDH1-203ENST00000561751 CCL19Q99731 98 aa4.91□□□□□ -1.62
CDH1-203ENST00000561751 SMR3AQ99954 134 aa4.91□□□□□ -1.62
CDH1-203ENST00000561751 HIVEP2P31629 2446 aa4.9□□□□□ -1.62
CDH1-203ENST00000561751 C16orf90A8MZG2 172 aa4.9□□□□□ -1.63
CDH1-203ENST00000561751 APOC4P55056 127 aa4.9□□□□□ -1.63
CDH1-203ENST00000561751 CMC4P56277 68 aaPredicted RBP4.9□□□□□ -1.63
CDH1-203ENST00000561751 Q6ZQY7 126 aa4.9□□□□□ -1.63
CDH1-203ENST00000561751 Q8N9P0 234 aaPredicted RBP4.9□□□□□ -1.63
CDH1-203ENST00000561751 UBE2E2Q96LR5 201 aa4.9□□□□□ -1.63
CDH1-203ENST00000561751 KRTAP9-8Q9BYQ0 159 aa4.9□□□□□ -1.63
CDH1-203ENST00000561751 CDC42SE1Q9NRR8 79 aa4.9□□□□□ -1.63
CDH1-203ENST00000561751 ZANQ9Y493 2812 aa4.9□□□□□ -1.63
CDH1-203ENST00000561751 GVQW2A0A096LPI5 108 aaPredicted RBP4.89□□□□□ -1.63
CDH1-203ENST00000561751 A0A0J9YWU9 116 aa4.89□□□□□ -1.63
CDH1-203ENST00000561751 A8MUN3 132 aa4.89□□□□□ -1.63
CDH1-203ENST00000561751 PSPHP1O15172 72 aa4.89□□□□□ -1.63
CDH1-203ENST00000561751 KIAA0087Q14695 138 aa4.89□□□□□ -1.63
CDH1-203ENST00000561751 HCG22E2RYF7 251 aa4.88□□□□□ -1.63
CDH1-203ENST00000561751 KCNQ1DNQ9H478 68 aa4.88□□□□□ -1.63
CDH1-203ENST00000561751 CHKB-CPT1BH3BT56 60 aa4.87□□□□□ -1.63
CDH1-203ENST00000561751 DEFB131AP59861 70 aa4.87□□□□□ -1.63
CDH1-203ENST00000561751 B9D2Q9BPU9 175 aa4.87□□□□□ -1.63
CDH1-203ENST00000561751 SONP18583 2426 aaKnown RBP4.87□□□□□ -1.63
CDH1-203ENST00000561751 IGLV4-60A0A075B6I1 120 aa4.86□□□□□ -1.63
CDH1-203ENST00000561751 IGLV5-48A0A075B6I7 105 aa4.86□□□□□ -1.63
CDH1-203ENST00000561751 HTN1P15515 57 aa4.86□□□□□ -1.63
CDH1-203ENST00000561751 MP68P56378 58 aa4.86□□□□□ -1.63
CDH1-203ENST00000561751 DSCR9P59020 149 aa4.86□□□□□ -1.63
CDH1-203ENST00000561751 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.85□□□□□ -1.63
CDH1-203ENST00000561751 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.85□□□□□ -1.63
CDH1-203ENST00000561751 TRGV1A0A0A0MS02 117 aa4.85□□□□□ -1.63
CDH1-203ENST00000561751 LINC01006Q8NI28 216 aa4.85□□□□□ -1.63
CDH1-203ENST00000561751 C16orf74Q96GX8 76 aa4.85□□□□□ -1.63
CDH1-203ENST00000561751 LINC00208Q96KT6 92 aa4.85□□□□□ -1.63
CDH1-203ENST00000561751 TRGV4A0A0C4DH28 118 aa4.84□□□□□ -1.63
CDH1-203ENST00000561751 INAFM1C9JVW0 142 aa4.84□□□□□ -1.63
CDH1-203ENST00000561751 C8orf87E5RJ46 101 aa4.84□□□□□ -1.63
CDH1-203ENST00000561751 PRR3P79522 188 aaKnown RBP4.84□□□□□ -1.63
CDH1-203ENST00000561751 SCXQ7RTU7 201 aa4.84□□□□□ -1.63
CDH1-203ENST00000561751 SMIM29Q86T20 159 aa4.83□□□□□ -1.64
CDH1-203ENST00000561751 LINC00612Q8N6U2 182 aa4.83□□□□□ -1.64
CDH1-203ENST00000561751 NKAPP1Q8N9T2 125 aa4.83□□□□□ -1.64
CDH1-203ENST00000561751 MAP6D1Q9H9H5 199 aa4.83□□□□□ -1.64
CDH1-203ENST00000561751 MAPK1IP1LQ8NDC0 245 aa4.82□□□□□ -1.64
CDH1-203ENST00000561751 SPRR4Q96PI1 79 aa4.82□□□□□ -1.64
CDH1-203ENST00000561751 FAM30AQ9NZY2 134 aa4.82□□□□□ -1.64
CDH1-203ENST00000561751 LINC01558Q9Y6Z2 57 aa4.82□□□□□ -1.64
CDH1-203ENST00000561751 WNK2Q9Y3S1 2297 aa4.82□□□□□ -1.64
CDH1-203ENST00000561751 H3BUX3 64 aa4.81□□□□□ -1.64
CDH1-203ENST00000561751 CNBPP62633 177 aaKnown RBP4.81□□□□□ -1.64
CDH1-203ENST00000561751 C9orf116Q5BN46 136 aaPredicted RBP4.81□□□□□ -1.64
CDH1-203ENST00000561751 C10orf25Q5T742 122 aa4.81□□□□□ -1.64
CDH1-203ENST00000561751 PLAC8Q9NZF1 115 aa4.81□□□□□ -1.64
CDH1-203ENST00000561751 ANK3Q12955 4377 aaKnown RBP4.81□□□□□ -1.64
CDH1-203ENST00000561751 ANK2Q01484 3957 aa4.81□□□□□ -1.64
CDH1-203ENST00000561751 LRCOL1A6NCL2 159 aa4.8□□□□□ -1.64
CDH1-203ENST00000561751 C11orf45Q8TAV5 145 aa4.8□□□□□ -1.64
CDH1-203ENST00000561751 PRR15LQ9BU68 103 aa4.8□□□□□ -1.64
CDH1-203ENST00000561751 MEGF8Q7Z7M0 2845 aa4.8□□□□□ -1.64
CDH1-203ENST00000561751 A6NED7 52 aa4.79□□□□□ -1.64
CDH1-203ENST00000561751 C3orf84H3BNL1 204 aa4.79□□□□□ -1.64
CDH1-203ENST00000561751 KRTAP1-1Q07627 177 aa4.78□□□□□ -1.64
CDH1-203ENST00000561751 KPRPQ5T749 579 aaPredicted RBP4.78□□□□□ -1.64
CDH1-203ENST00000561751 Q8N9L7 120 aa4.78□□□□□ -1.64
CDH1-203ENST00000561751 Q8NDZ9 215 aa4.78□□□□□ -1.64
CDH1-203ENST00000561751 SPTSSBQ8NFR3 76 aa4.78□□□□□ -1.64
CDH1-203ENST00000561751 CUBNO60494 3623 aa4.78□□□□□ -1.64
CDH1-203ENST00000561751 CR1P17927 2039 aa4.77□□□□□ -1.65
CDH1-203ENST00000561751 MGAM2Q2M2H8 2515 aa4.77□□□□□ -1.65
CDH1-203ENST00000561751 IGLV7-46A0A075B6I9 117 aa4.77□□□□□ -1.65
CDH1-203ENST00000561751 PRM2P04554 102 aa4.77□□□□□ -1.65
CDH1-203ENST00000561751 DSCR10P59022 87 aa4.77□□□□□ -1.65
CDH1-203ENST00000561751 Q8NBF4 154 aa4.77□□□□□ -1.65
CDH1-203ENST00000561751 WFDC10AQ9H1F0 79 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms