RNA–Protein interactions for RNA: ENST00000561662.1

COMMD4-204, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-204ENST00000561662 CTAG1AP78358 180 aa10.79□□□□□ -0.68
COMMD4-204ENST00000561662 CEND1Q8N111 149 aa10.79□□□□□ -0.68
COMMD4-204ENST00000561662 MUC17Q685J3 4493 aa10.79□□□□□ -0.68
COMMD4-204ENST00000561662 IGLV5-37A0A075B6J1 123 aa10.78□□□□□ -0.68
COMMD4-204ENST00000561662 NDUFC2O95298 119 aa10.78□□□□□ -0.68
COMMD4-204ENST00000561662 COPS9Q8WXC6 57 aa10.78□□□□□ -0.68
COMMD4-204ENST00000561662 UBE2BP63146 152 aa10.77□□□□□ -0.69
COMMD4-204ENST00000561662 IGKV2-28A0A075B6P5 120 aa10.76□□□□□ -0.69
COMMD4-204ENST00000561662 A4D1N5 150 aa10.76□□□□□ -0.69
COMMD4-204ENST00000561662 IGKV2D-28P01615 120 aa10.76□□□□□ -0.69
COMMD4-204ENST00000561662 FXYD2P54710 66 aa10.75□□□□□ -0.69
COMMD4-204ENST00000561662 RPL24P83731 157 aaKnown RBP10.75□□□□□ -0.69
COMMD4-204ENST00000561662 RETNLBQ9BQ08 111 aa10.75□□□□□ -0.69
COMMD4-204ENST00000561662 M0QXV9 152 aa10.73□□□□□ -0.69
COMMD4-204ENST00000561662 BVES-AS1Q5T3Y7 98 aa10.73□□□□□ -0.69
COMMD4-204ENST00000561662 C22orf24Q9Y442 160 aa10.73□□□□□ -0.69
COMMD4-204ENST00000561662 TRBV10-2A0A0K0K1G8 114 aa10.72□□□□□ -0.69
COMMD4-204ENST00000561662 CRCT1Q9UGL9 99 aa10.72□□□□□ -0.69
COMMD4-204ENST00000561662 FSIP2Q5CZC0 6907 aa10.7□□□□□ -0.7
COMMD4-204ENST00000561662 A0A087X002 238 aa10.7□□□□□ -0.7
COMMD4-204ENST00000561662 M0R378 163 aa10.7□□□□□ -0.7
COMMD4-204ENST00000561662 CFC1BP0CG36 223 aa10.7□□□□□ -0.7
COMMD4-204ENST00000561662 CFC1P0CG37 223 aa10.7□□□□□ -0.7
COMMD4-204ENST00000561662 LINC00337Q8N6G1 96 aa10.7□□□□□ -0.7
COMMD4-204ENST00000561662 A0A1B0GWB2 263 aa10.69□□□□□ -0.7
COMMD4-204ENST00000561662 NCR3O14931 201 aa10.69□□□□□ -0.7
COMMD4-204ENST00000561662 HINT1P49773 126 aaPredicted RBP10.69□□□□□ -0.7
COMMD4-204ENST00000561662 CDIP1Q9H305 208 aa10.69□□□□□ -0.7
COMMD4-204ENST00000561662 PCP4L1A6NKN8 68 aa10.68□□□□□ -0.7
COMMD4-204ENST00000561662 M0R143 59 aa10.68□□□□□ -0.7
COMMD4-204ENST00000561662 MRPL55Q7Z7F7 128 aaKnown RBP10.68□□□□□ -0.7
COMMD4-204ENST00000561662 A0A0B4J2C4 111 aa10.67□□□□□ -0.7
COMMD4-204ENST00000561662 TMEM238LA0A1B0GVL6 79 aa10.67□□□□□ -0.7
COMMD4-204ENST00000561662 A6NJY4 79 aa10.67□□□□□ -0.7
COMMD4-204ENST00000561662 IGLV6-57P01721 117 aa10.67□□□□□ -0.7
COMMD4-204ENST00000561662 NKAPP1Q8N9T2 125 aa10.67□□□□□ -0.7
COMMD4-204ENST00000561662 LINC00167Q96N53 147 aa10.67□□□□□ -0.7
COMMD4-204ENST00000561662 ZNF861PO60384 105 aa10.66□□□□□ -0.7
COMMD4-204ENST00000561662 LBHQ53QV2 105 aaPredicted RBP10.65□□□□□ -0.7
COMMD4-204ENST00000561662 LCE2DQ5TA82 110 aaPredicted RBP10.65□□□□□ -0.7
COMMD4-204ENST00000561662 TYMSOSQ8TAI1 123 aa10.65□□□□□ -0.7
COMMD4-204ENST00000561662 TRBV10-3A0A0K0K1G6 114 aa10.64□□□□□ -0.71
COMMD4-204ENST00000561662 GAGE10A6NGK3 116 aa10.64□□□□□ -0.71
COMMD4-204ENST00000561662 NHP2Q9NX24 153 aaKnown RBP10.64□□□□□ -0.71
COMMD4-204ENST00000561662 ANAPC11Q9NYG5 84 aa10.64□□□□□ -0.71
COMMD4-204ENST00000561662 TRAV13-2A0A0B4J235 113 aa10.63□□□□□ -0.71
COMMD4-204ENST00000561662 K7ERJ3 54 aa10.62□□□□□ -0.71
COMMD4-204ENST00000561662 SNHG12Q9BXW3 62 aa10.62□□□□□ -0.71
COMMD4-204ENST00000561662 RPL37AP8A6NKH3 93 aa10.61□□□□□ -0.71
COMMD4-204ENST00000561662 TMEM126AQ9H061 195 aa10.61□□□□□ -0.71
COMMD4-204ENST00000561662 A6NDN8 102 aa10.6□□□□□ -0.71
COMMD4-204ENST00000561662 S100A7L2Q5SY68 101 aa10.6□□□□□ -0.71
COMMD4-204ENST00000561662 KCNQ1DNQ9H478 68 aa10.6□□□□□ -0.71
COMMD4-204ENST00000561662 PRO1854Q9UHT4 67 aa10.6□□□□□ -0.71
COMMD4-204ENST00000561662 CRYGAP11844 174 aa10.59□□□□□ -0.71
COMMD4-204ENST00000561662 OR13C6PQ8NH95 151 aa10.59□□□□□ -0.71
COMMD4-204ENST00000561662 RAB37Q96AX2 223 aa10.59□□□□□ -0.71
COMMD4-204ENST00000561662 IGLV7-46A0A075B6I9 117 aa10.58□□□□□ -0.72
COMMD4-204ENST00000561662 TPRXLQ17RH7 258 aa10.58□□□□□ -0.72
COMMD4-204ENST00000561662 SPRR1AP35321 89 aa10.57□□□□□ -0.72
COMMD4-204ENST00000561662 BATFQ16520 125 aa10.57□□□□□ -0.72
COMMD4-204ENST00000561662 KRTAP4-16G5E9R7 235 aaPredicted RBP10.56□□□□□ -0.72
COMMD4-204ENST00000561662 PRYO14603 147 aa10.56□□□□□ -0.72
COMMD4-204ENST00000561662 SMIM11BQ8TCY0 68 aa10.56□□□□□ -0.72
COMMD4-204ENST00000561662 TRAV23DV6A0A075B6W5 121 aa10.55□□□□□ -0.72
COMMD4-204ENST00000561662 KRTAP13-2Q52LG2 175 aa10.55□□□□□ -0.72
COMMD4-204ENST00000561662 RPL28P46779 137 aaKnown RBP10.53□□□□□ -0.72
COMMD4-204ENST00000561662 LINC01547P58512 204 aaPredicted RBP10.53□□□□□ -0.72
COMMD4-204ENST00000561662 ZNF73O43830 326 aaPredicted RBP10.52□□□□□ -0.73
COMMD4-204ENST00000561662 LINC00304Q8N9R0 145 aa10.52□□□□□ -0.73
COMMD4-204ENST00000561662 CBY1Q9Y3M2 126 aa10.52□□□□□ -0.73
COMMD4-204ENST00000561662 H7C2G1 150 aa10.51□□□□□ -0.73
COMMD4-204ENST00000561662 TAX1BP3O14907 124 aa10.5□□□□□ -0.73
COMMD4-204ENST00000561662 C6orf99Q4VX62 202 aa10.5□□□□□ -0.73
COMMD4-204ENST00000561662 TRBV7-6A0A0J9YX20 115 aa10.48□□□□□ -0.73
COMMD4-204ENST00000561662 BCE1O60756 84 aa10.48□□□□□ -0.73
COMMD4-204ENST00000561662 KRTAP13-1Q8IUC0 172 aa10.48□□□□□ -0.73
COMMD4-204ENST00000561662 B5MCH6 92 aa10.47□□□□□ -0.73
COMMD4-204ENST00000561662 TRIAP1O43715 76 aa10.47□□□□□ -0.73
COMMD4-204ENST00000561662 COL5A1-AS1Q5SY13 56 aa10.47□□□□□ -0.73
COMMD4-204ENST00000561662 KRTAP4-1Q9BYQ7 146 aa10.47□□□□□ -0.73
COMMD4-204ENST00000561662 Q1RN00 199 aa10.46□□□□□ -0.73
COMMD4-204ENST00000561662 ELOF1P60002 83 aaKnown RBP10.45□□□□□ -0.74
COMMD4-204ENST00000561662 C9orf118A6NHY6 69 aa10.44□□□□□ -0.74
COMMD4-204ENST00000561662 Q6ZRX8 168 aa10.44□□□□□ -0.74
COMMD4-204ENST00000561662 ETDCA0A1B0GVM5 59 aa10.43□□□□□ -0.74
COMMD4-204ENST00000561662 COX7BP24311 80 aa10.43□□□□□ -0.74
COMMD4-204ENST00000561662 NAA38Q9BRA0 125 aaKnown RBP10.43□□□□□ -0.74
COMMD4-204ENST00000561662 PRLHP81277 87 aa10.42□□□□□ -0.74
COMMD4-204ENST00000561662 FAM19A1Q7Z5A9 133 aa10.42□□□□□ -0.74
COMMD4-204ENST00000561662 Q9BRP9 147 aa10.41□□□□□ -0.74
COMMD4-204ENST00000561662 H3BUT2 72 aa10.4□□□□□ -0.74
COMMD4-204ENST00000561662 PSMB2P49721 201 aa10.4□□□□□ -0.74
COMMD4-204ENST00000561662 VAMP3Q15836 100 aa10.4□□□□□ -0.74
COMMD4-204ENST00000561662 H0YGX0 51 aa10.39□□□□□ -0.75
COMMD4-204ENST00000561662 UBE2AP49459 152 aa10.39□□□□□ -0.75
COMMD4-204ENST00000561662 LINC00575Q6W349 94 aa10.39□□□□□ -0.75
COMMD4-204ENST00000561662 SMCR5Q8TEV8 140 aa10.39□□□□□ -0.75
COMMD4-204ENST00000561662 FAM218AQ96MZ4 157 aa10.39□□□□□ -0.75
COMMD4-204ENST00000561662 ASB16-AS1Q495Z4 193 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms