RNA–Protein interactions for RNA: ENST00000561638.1

TMEM249-201, Transcript of transmembrane protein 249, humanhuman

TSL 2

Gene TMEM249, Length 1,762 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249-201ENST00000561638 LINC00308Q8TCZ7 52 aa14.78□□□□□ -0.04
TMEM249-201ENST00000561638 COPS9Q8WXC6 57 aa14.78□□□□□ -0.04
TMEM249-201ENST00000561638 HAMPP81172 84 aa14.78□□□□□ -0.04
TMEM249-201ENST00000561638 SCXQ7RTU7 201 aa14.77□□□□□ -0.05
TMEM249-201ENST00000561638 TRBV7-7A0A0K0K1E9 115 aa14.76□□□□□ -0.05
TMEM249-201ENST00000561638 A0A1W2PNN7 141 aa14.76□□□□□ -0.05
TMEM249-201ENST00000561638 C5orf47Q569G3 176 aa14.75□□□□□ -0.05
TMEM249-201ENST00000561638 SERTAD4-AS1Q5TG53 156 aa14.75□□□□□ -0.05
TMEM249-201ENST00000561638 SOSTDC1Q6X4U4 206 aa14.75□□□□□ -0.05
TMEM249-201ENST00000561638 CIRBP-AS1Q8TBR5 109 aa14.75□□□□□ -0.05
TMEM249-201ENST00000561638 EPPK1P58107 5090 aaKnown RBP14.75□□□□□ -0.05
TMEM249-201ENST00000561638 LRP1BQ9NZR2 4599 aa14.74□□□□□ -0.05
TMEM249-201ENST00000561638 EIF4EBP3O60516 100 aaPredicted RBP14.74□□□□□ -0.05
TMEM249-201ENST00000561638 NKAPP1Q8N9T2 125 aa14.74□□□□□ -0.05
TMEM249-201ENST00000561638 PLAC8Q9NZF1 115 aa14.73□□□□□ -0.05
TMEM249-201ENST00000561638 MUSTN1Q8IVN3 82 aa14.73□□□□□ -0.05
TMEM249-201ENST00000561638 PLA2G2DQ9UNK4 145 aa14.73□□□□□ -0.05
TMEM249-201ENST00000561638 DYNC1H1Q14204 4646 aaKnown RBP14.72□□□□□ -0.05
TMEM249-201ENST00000561638 Q1RN00 199 aa14.72□□□□□ -0.05
TMEM249-201ENST00000561638 VPREB1P12018 145 aa14.7□□□□□ -0.06
TMEM249-201ENST00000561638 KRTAP7-1Q8IUC3 87 aa14.7□□□□□ -0.06
TMEM249-201ENST00000561638 Q8NDZ9 215 aa14.7□□□□□ -0.06
TMEM249-201ENST00000561638 A0A1B0GX51 115 aa14.69□□□□□ -0.06
TMEM249-201ENST00000561638 C22orf24Q9Y442 160 aa14.69□□□□□ -0.06
TMEM249-201ENST00000561638 PRR3P79522 188 aaKnown RBP14.68□□□□□ -0.06
TMEM249-201ENST00000561638 NCR3O14931 201 aa14.68□□□□□ -0.06
TMEM249-201ENST00000561638 J3KT08 172 aa14.67□□□□□ -0.06
TMEM249-201ENST00000561638 NDUFC2O95298 119 aa14.67□□□□□ -0.06
TMEM249-201ENST00000561638 UQCRQO14949 82 aa14.66□□□□□ -0.06
TMEM249-201ENST00000561638 MRPL55Q7Z7F7 128 aaKnown RBP14.66□□□□□ -0.06
TMEM249-201ENST00000561638 IGLV5-37A0A075B6J1 123 aa14.65□□□□□ -0.06
TMEM249-201ENST00000561638 PHF5AQ7RTV0 110 aaKnown RBP14.65□□□□□ -0.06
TMEM249-201ENST00000561638 PPDPFQ9H3Y8 114 aa14.65□□□□□ -0.06
TMEM249-201ENST00000561638 A4D1N5 150 aa14.65□□□□□ -0.06
TMEM249-201ENST00000561638 CDK2AP2O75956 126 aa14.65□□□□□ -0.06
TMEM249-201ENST00000561638 OR13C6PQ8NH95 151 aa14.65□□□□□ -0.06
TMEM249-201ENST00000561638 EPM2AB3EWF7 344 aa14.63□□□□□ -0.07
TMEM249-201ENST00000561638 UBE2BP63146 152 aa14.63□□□□□ -0.07
TMEM249-201ENST00000561638 RPS28P62857 69 aaKnown RBP14.62□□□□□ -0.07
TMEM249-201ENST00000561638 C9orf153Q5TBE3 101 aa14.62□□□□□ -0.07
TMEM249-201ENST00000561638 C3orf22Q8N5N4 141 aa14.62□□□□□ -0.07
TMEM249-201ENST00000561638 DNAH8Q96JB1 4490 aa14.62□□□□□ -0.07
TMEM249-201ENST00000561638 M0R378 163 aa14.62□□□□□ -0.07
TMEM249-201ENST00000561638 C7orf33Q8WU49 177 aa14.62□□□□□ -0.07
TMEM249-201ENST00000561638 RPL37AP8A6NKH3 93 aa14.6□□□□□ -0.07
TMEM249-201ENST00000561638 S100A7L2Q5SY68 101 aa14.6□□□□□ -0.07
TMEM249-201ENST00000561638 LINC00167Q96N53 147 aa14.6□□□□□ -0.07
TMEM249-201ENST00000561638 IGKV2-28A0A075B6P5 120 aa14.58□□□□□ -0.08
TMEM249-201ENST00000561638 IGKV2D-28P01615 120 aa14.58□□□□□ -0.08
TMEM249-201ENST00000561638 LINC00643Q86TS7 51 aa14.58□□□□□ -0.08
TMEM249-201ENST00000561638 TEX49A0A1B0GTD5 131 aa14.57□□□□□ -0.08
TMEM249-201ENST00000561638 SMR3BP02814 79 aaPredicted RBP14.57□□□□□ -0.08
TMEM249-201ENST00000561638 APOBP04114 4563 aaKnown RBP14.55□□□□□ -0.08
TMEM249-201ENST00000561638 TRBV10-3A0A0K0K1G6 114 aa14.55□□□□□ -0.08
TMEM249-201ENST00000561638 LINC00337Q8N6G1 96 aa14.54□□□□□ -0.08
TMEM249-201ENST00000561638 LST1O00453 97 aa14.52□□□□□ -0.08
TMEM249-201ENST00000561638 IGLV1-50A0A075B6I6 118 aa14.52□□□□□ -0.09
TMEM249-201ENST00000561638 TRAV13-2A0A0B4J235 113 aa14.52□□□□□ -0.09
TMEM249-201ENST00000561638 FAM236AA0A1B0GUQ0 79 aa14.52□□□□□ -0.09
TMEM249-201ENST00000561638 FAM236BA0A1B0GV22 79 aa14.52□□□□□ -0.09
TMEM249-201ENST00000561638 LINC00528Q8N1L1 170 aa14.52□□□□□ -0.09
TMEM249-201ENST00000561638 TRIAP1O43715 76 aa14.51□□□□□ -0.09
TMEM249-201ENST00000561638 H7C2G1 150 aa14.5□□□□□ -0.09
TMEM249-201ENST00000561638 ATOX1O00244 68 aa14.5□□□□□ -0.09
TMEM249-201ENST00000561638 IGLV6-57P01721 117 aa14.5□□□□□ -0.09
TMEM249-201ENST00000561638 KRTAP11-1Q8IUC1 163 aa14.5□□□□□ -0.09
TMEM249-201ENST00000561638 COX7CP15954 63 aa14.47□□□□□ -0.09
TMEM249-201ENST00000561638 PSORS1C2Q9UIG4 136 aa14.47□□□□□ -0.09
TMEM249-201ENST00000561638 INAFM2P0DMQ5 153 aa14.47□□□□□ -0.09
TMEM249-201ENST00000561638 CRYGAP11844 174 aa14.47□□□□□ -0.09
TMEM249-201ENST00000561638 TRAV23DV6A0A075B6W5 121 aa14.45□□□□□ -0.1
TMEM249-201ENST00000561638 REG3GQ6UW15 175 aa14.45□□□□□ -0.1
TMEM249-201ENST00000561638 RPL37AP61513 92 aaKnown RBP14.45□□□□□ -0.1
TMEM249-201ENST00000561638 GAGE2AQ6NT46 116 aa14.45□□□□□ -0.1
TMEM249-201ENST00000561638 KCNQ1DNQ9H478 68 aa14.45□□□□□ -0.1
TMEM249-201ENST00000561638 KIAA1109Q2LD37 5005 aa14.44□□□□□ -0.1
TMEM249-201ENST00000561638 FAM229AH3BQW9 127 aa14.44□□□□□ -0.1
TMEM249-201ENST00000561638 PRYO14603 147 aa14.44□□□□□ -0.1
TMEM249-201ENST00000561638 TMEM258P61165 79 aa14.44□□□□□ -0.1
TMEM249-201ENST00000561638 C1orf137Q5JT78 98 aa14.44□□□□□ -0.1
TMEM249-201ENST00000561638 HSPG2P98160 4391 aa14.4□□□□□ -0.1
TMEM249-201ENST00000561638 BIRC6Q9NR09 4857 aa14.4□□□□□ -0.1
TMEM249-201ENST00000561638 ZNF73O43830 326 aaPredicted RBP14.39□□□□□ -0.11
TMEM249-201ENST00000561638 TRACP01848 142 aa14.39□□□□□ -0.11
TMEM249-201ENST00000561638 RYR1P21817 5038 aa14.38□□□□□ -0.11
TMEM249-201ENST00000561638 BCE1O60756 84 aa14.38□□□□□ -0.11
TMEM249-201ENST00000561638 PLA2G1BP04054 148 aaKnown RBP14.38□□□□□ -0.11
TMEM249-201ENST00000561638 Q5VSD8 79 aa14.37□□□□□ -0.11
TMEM249-201ENST00000561638 ETDCA0A1B0GVM5 59 aa14.37□□□□□ -0.11
TMEM249-201ENST00000561638 FAM19A1Q7Z5A9 133 aa14.37□□□□□ -0.11
TMEM249-201ENST00000561638 SMIM11BQ8TCY0 68 aa14.37□□□□□ -0.11
TMEM249-201ENST00000561638 DIRC1Q969H9 104 aa14.37□□□□□ -0.11
TMEM249-201ENST00000561638 UBE2AP49459 152 aa14.35□□□□□ -0.11
TMEM249-201ENST00000561638 C6orf99Q4VX62 202 aa14.35□□□□□ -0.11
TMEM249-201ENST00000561638 Q8N1X5 172 aa14.35□□□□□ -0.11
TMEM249-201ENST00000561638 SPRR1AP35321 89 aa14.34□□□□□ -0.11
TMEM249-201ENST00000561638 IGLV7-43P04211 117 aa14.32□□□□□ -0.12
TMEM249-201ENST00000561638 PRLHP81277 87 aa14.32□□□□□ -0.12
TMEM249-201ENST00000561638 FAT1Q14517 4588 aa14.31□□□□□ -0.12
TMEM249-201ENST00000561638 HIST1H4AP62805 103 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms