RNA–Protein interactions for RNA: ENST00000561442.5

USP3-221, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-221ENST00000561442 A4D1N5 150 aa8.87□□□□□ -0.99
USP3-221ENST00000561442 OCIAD2Q56VL3 154 aa8.87□□□□□ -0.99
USP3-221ENST00000561442 MUSTN1Q8IVN3 82 aa8.87□□□□□ -0.99
USP3-221ENST00000561442 MIR7-3HGQ8N6C7 128 aa8.87□□□□□ -0.99
USP3-221ENST00000561442 PLA2G2DQ9UNK4 145 aa8.87□□□□□ -0.99
USP3-221ENST00000561442 C1orf137Q5JT78 98 aa8.86□□□□□ -0.99
USP3-221ENST00000561442 MRPL55Q7Z7F7 128 aaKnown RBP8.86□□□□□ -0.99
USP3-221ENST00000561442 DAND5Q8N907 189 aa8.86□□□□□ -0.99
USP3-221ENST00000561442 NKAPP1Q8N9T2 125 aa8.86□□□□□ -0.99
USP3-221ENST00000561442 CBY1Q9Y3M2 126 aa8.86□□□□□ -0.99
USP3-221ENST00000561442 Q8NDZ9 215 aa8.85□□□□□ -0.99
USP3-221ENST00000561442 IGLV5-37A0A075B6J1 123 aa8.84□□□□□ -0.99
USP3-221ENST00000561442 VPREB1P12018 145 aa8.84□□□□□ -0.99
USP3-221ENST00000561442 LINC00167Q96N53 147 aa8.84□□□□□ -0.99
USP3-221ENST00000561442 RPL37AP8A6NKH3 93 aa8.83□□□□□ -1
USP3-221ENST00000561442 J3QR89 54 aa8.83□□□□□ -1
USP3-221ENST00000561442 LOC107984156A0A0G2JMH3 177 aa8.81□□□□□ -1
USP3-221ENST00000561442 ARL17AQ8IVW1 177 aa8.81□□□□□ -1
USP3-221ENST00000561442 H3BMG7 143 aa8.8□□□□□ -1
USP3-221ENST00000561442 COX6CP09669 75 aa8.8□□□□□ -1
USP3-221ENST00000561442 NPC2P61916 151 aa8.8□□□□□ -1
USP3-221ENST00000561442 ADAMTSL4-AS1Q5T5F5 129 aa8.8□□□□□ -1
USP3-221ENST00000561442 IGKV2-28A0A075B6P5 120 aa8.79□□□□□ -1
USP3-221ENST00000561442 NCR3O14931 201 aa8.79□□□□□ -1
USP3-221ENST00000561442 IGKV2D-28P01615 120 aa8.79□□□□□ -1
USP3-221ENST00000561442 SCGB1C2P0DMR2 95 aa8.79□□□□□ -1
USP3-221ENST00000561442 PRO0461Q9UI25 63 aa8.79□□□□□ -1
USP3-221ENST00000561442 IGLV7-43P04211 117 aa8.78□□□□□ -1
USP3-221ENST00000561442 PSMB2P49721 201 aa8.78□□□□□ -1
USP3-221ENST00000561442 LINC00308Q8TCZ7 52 aa8.78□□□□□ -1
USP3-221ENST00000561442 LINC01600Q96MT4 127 aa8.78□□□□□ -1
USP3-221ENST00000561442 ATXN8Q156A1 80 aa8.77□□□□□ -1.01
USP3-221ENST00000561442 Q1RN00 199 aa8.77□□□□□ -1.01
USP3-221ENST00000561442 M0R378 163 aa8.76□□□□□ -1.01
USP3-221ENST00000561442 EIF4EBP3O60516 100 aaPredicted RBP8.76□□□□□ -1.01
USP3-221ENST00000561442 SPINK6Q6UWN8 80 aa8.76□□□□□ -1.01
USP3-221ENST00000561442 SOSTDC1Q6X4U4 206 aa8.76□□□□□ -1.01
USP3-221ENST00000561442 IGLV1-50A0A075B6I6 118 aa8.75□□□□□ -1.01
USP3-221ENST00000561442 BCE1O60756 84 aa8.75□□□□□ -1.01
USP3-221ENST00000561442 TCL1BO95988 128 aa8.75□□□□□ -1.01
USP3-221ENST00000561442 DMBT1Q9UGM3 2413 aaPredicted RBP8.73□□□□□ -1.01
USP3-221ENST00000561442 TRAV13-2A0A0B4J235 113 aa8.73□□□□□ -1.01
USP3-221ENST00000561442 KRTAP29-1A8MX34 341 aaPredicted RBP8.73□□□□□ -1.01
USP3-221ENST00000561442 J3QL48 77 aa8.73□□□□□ -1.01
USP3-221ENST00000561442 VPS25Q9BRG1 176 aa8.73□□□□□ -1.01
USP3-221ENST00000561442 DIRC1Q969H9 104 aa8.72□□□□□ -1.01
USP3-221ENST00000561442 HERC1Q15751 4861 aa8.72□□□□□ -1.01
USP3-221ENST00000561442 TNXBP22105 4242 aa8.72□□□□□ -1.01
USP3-221ENST00000561442 TRIAP1O43715 76 aa8.71□□□□□ -1.02
USP3-221ENST00000561442 ZNF861PO60384 105 aa8.71□□□□□ -1.02
USP3-221ENST00000561442 OXTP01178 125 aa8.71□□□□□ -1.02
USP3-221ENST00000561442 RPL13AP40429 203 aaKnown RBP8.71□□□□□ -1.02
USP3-221ENST00000561442 REG3GQ6UW15 175 aa8.71□□□□□ -1.02
USP3-221ENST00000561442 TEN1Q86WV5 123 aa8.71□□□□□ -1.02
USP3-221ENST00000561442 TMEM126AQ9H061 195 aa8.71□□□□□ -1.02
USP3-221ENST00000561442 TRBV10-3A0A0K0K1G6 114 aa8.7□□□□□ -1.02
USP3-221ENST00000561442 UBE2AP49459 152 aa8.7□□□□□ -1.02
USP3-221ENST00000561442 ETDBQ3ZM63 59 aa8.7□□□□□ -1.02
USP3-221ENST00000561442 PPDPFLQ8WWR9 84 aa8.7□□□□□ -1.02
USP3-221ENST00000561442 H0Y9J4 135 aa8.69□□□□□ -1.02
USP3-221ENST00000561442 H3BT86 120 aa8.69□□□□□ -1.02
USP3-221ENST00000561442 NDUFC2O95298 119 aa8.69□□□□□ -1.02
USP3-221ENST00000561442 RPL28P46779 137 aaKnown RBP8.69□□□□□ -1.02
USP3-221ENST00000561442 TRBV10-2A0A0K0K1G8 114 aa8.68□□□□□ -1.02
USP3-221ENST00000561442 H7C2G1 150 aa8.68□□□□□ -1.02
USP3-221ENST00000561442 SLC25A20O43772 301 aa8.68□□□□□ -1.02
USP3-221ENST00000561442 PRLHP81277 87 aa8.68□□□□□ -1.02
USP3-221ENST00000561442 FAM19A1Q7Z5A9 133 aa8.68□□□□□ -1.02
USP3-221ENST00000561442 LST1O00453 97 aa8.67□□□□□ -1.02
USP3-221ENST00000561442 PRYO14603 147 aa8.67□□□□□ -1.02
USP3-221ENST00000561442 SMCPP49901 116 aaPredicted RBP8.67□□□□□ -1.02
USP3-221ENST00000561442 S100A7L2Q5SY68 101 aa8.67□□□□□ -1.02
USP3-221ENST00000561442 C9JAW5 83 aa8.66□□□□□ -1.02
USP3-221ENST00000561442 KRTAP13-1Q8IUC0 172 aa8.66□□□□□ -1.02
USP3-221ENST00000561442 ANKRD29Q8N6D5 301 aa8.66□□□□□ -1.02
USP3-221ENST00000561442 KCNQ1DNQ9H478 68 aa8.66□□□□□ -1.02
USP3-221ENST00000561442 IGLV6-57P01721 117 aa8.64□□□□□ -1.03
USP3-221ENST00000561442 MT1HL1P0DM35 61 aa8.64□□□□□ -1.03
USP3-221ENST00000561442 OR13C6PQ8NH95 151 aa8.64□□□□□ -1.03
USP3-221ENST00000561442 TRACP01848 142 aa8.63□□□□□ -1.03
USP3-221ENST00000561442 ETDCA0A1B0GVM5 59 aa8.62□□□□□ -1.03
USP3-221ENST00000561442 SPRR1AP35321 89 aa8.62□□□□□ -1.03
USP3-221ENST00000561442 TRAV23DV6A0A075B6W5 121 aa8.61□□□□□ -1.03
USP3-221ENST00000561442 H0YGX0 51 aa8.61□□□□□ -1.03
USP3-221ENST00000561442 KRTAP1-4P0C5Y4 121 aa8.61□□□□□ -1.03
USP3-221ENST00000561442 MTURNQ8N3F0 131 aa8.61□□□□□ -1.03
USP3-221ENST00000561442 LINC00337Q8N6G1 96 aa8.61□□□□□ -1.03
USP3-221ENST00000561442 HIGD2AQ9BW72 106 aa8.61□□□□□ -1.03
USP3-221ENST00000561442 KRTAP4-16G5E9R7 235 aaPredicted RBP8.6□□□□□ -1.03
USP3-221ENST00000561442 PRR26Q8N8Z3 221 aa8.6□□□□□ -1.03
USP3-221ENST00000561442 SCGB1A1P11684 91 aa8.58□□□□□ -1.04
USP3-221ENST00000561442 KRTAP10-8P60410 259 aa8.58□□□□□ -1.04
USP3-221ENST00000561442 A0A1B0GX51 115 aa8.57□□□□□ -1.04
USP3-221ENST00000561442 B5MCH6 92 aa8.57□□□□□ -1.04
USP3-221ENST00000561442 ZNF73O43830 326 aaPredicted RBP8.57□□□□□ -1.04
USP3-221ENST00000561442 CLEC2BQ92478 149 aa8.57□□□□□ -1.04
USP3-221ENST00000561442 SIGMAR1Q99720 223 aa8.57□□□□□ -1.04
USP3-221ENST00000561442 ANAPC11Q9NYG5 84 aa8.57□□□□□ -1.04
USP3-221ENST00000561442 SMCR5Q8TEV8 140 aa8.55□□□□□ -1.04
USP3-221ENST00000561442 FAM240AA0A1B0GVK7 77 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms