RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 EGFEM1PQ0D2K5 195 aa10.82□□□□□ -0.68
TPM1-228ENST00000560975 PRR4Q16378 134 aa10.82□□□□□ -0.68
TPM1-228ENST00000560975 hDV103S1A0JD37 113 aa10.81□□□□□ -0.68
TPM1-228ENST00000560975 PRB2P02812 416 aaPredicted RBP10.81□□□□□ -0.68
TPM1-228ENST00000560975 KRTAP10-3P60369 221 aa10.81□□□□□ -0.68
TPM1-228ENST00000560975 Q6ZRP5 223 aa10.81□□□□□ -0.68
TPM1-228ENST00000560975 WFDC10BQ8IUB3 73 aa10.81□□□□□ -0.68
TPM1-228ENST00000560975 ANK3Q12955 4377 aaKnown RBP10.8□□□□□ -0.68
TPM1-228ENST00000560975 C1orf64Q8NEQ6 169 aa10.79□□□□□ -0.68
TPM1-228ENST00000560975 UBR5O95071 2799 aaPredicted RBP10.79□□□□□ -0.68
TPM1-228ENST00000560975 Q8NAQ8 132 aa10.79□□□□□ -0.68
TPM1-228ENST00000560975 A0A1W2PNM2 257 aa10.78□□□□□ -0.68
TPM1-228ENST00000560975 SPART-AS1P0CW21 52 aa10.78□□□□□ -0.68
TPM1-228ENST00000560975 C15orf56Q8N910 161 aa10.78□□□□□ -0.68
TPM1-228ENST00000560975 PSPHP1O15172 72 aa10.77□□□□□ -0.69
TPM1-228ENST00000560975 NKAPP1Q8N9T2 125 aa10.77□□□□□ -0.69
TPM1-228ENST00000560975 SEC61GP60059 68 aa10.76□□□□□ -0.69
TPM1-228ENST00000560975 SERTAD4-AS1Q5TG53 156 aa10.75□□□□□ -0.69
TPM1-228ENST00000560975 IGLV5-48A0A075B6I7 105 aa10.75□□□□□ -0.69
TPM1-228ENST00000560975 RPL37AP8A6NKH3 93 aa10.75□□□□□ -0.69
TPM1-228ENST00000560975 HIVEP1P15822 2718 aa10.75□□□□□ -0.69
TPM1-228ENST00000560975 APOC4P55056 127 aa10.75□□□□□ -0.69
TPM1-228ENST00000560975 C1orf137Q5JT78 98 aa10.75□□□□□ -0.69
TPM1-228ENST00000560975 ST20-AS1Q8NBB2 130 aa10.74□□□□□ -0.69
TPM1-228ENST00000560975 C7orf33Q8WU49 177 aa10.74□□□□□ -0.69
TPM1-228ENST00000560975 K7EQZ3 153 aa10.73□□□□□ -0.69
TPM1-228ENST00000560975 KRTAP26-1Q6PEX3 210 aa10.73□□□□□ -0.69
TPM1-228ENST00000560975 F8P00451 2351 aa10.73□□□□□ -0.69
TPM1-228ENST00000560975 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.71□□□□□ -0.69
TPM1-228ENST00000560975 ETDCA0A1B0GVM5 59 aa10.71□□□□□ -0.69
TPM1-228ENST00000560975 DSCR10P59022 87 aa10.71□□□□□ -0.69
TPM1-228ENST00000560975 KRTAP1-1Q07627 177 aa10.71□□□□□ -0.69
TPM1-228ENST00000560975 KCNQ1DNQ9H478 68 aa10.71□□□□□ -0.69
TPM1-228ENST00000560975 PKD1L1Q8TDX9 2849 aa10.71□□□□□ -0.69
TPM1-228ENST00000560975 LCE6AA0A183 80 aa10.71□□□□□ -0.7
TPM1-228ENST00000560975 USP24Q9UPU5 2620 aa10.7□□□□□ -0.7
TPM1-228ENST00000560975 IGKV2D-24A0A075B6R9 120 aa10.7□□□□□ -0.7
TPM1-228ENST00000560975 Q9BRP9 147 aa10.7□□□□□ -0.7
TPM1-228ENST00000560975 Q1T7F1 81 aa10.69□□□□□ -0.7
TPM1-228ENST00000560975 ZCCHC13Q8WW36 166 aaKnown RBP10.69□□□□□ -0.7
TPM1-228ENST00000560975 SYCNQ0VAF6 134 aa10.68□□□□□ -0.7
TPM1-228ENST00000560975 Q8NBF4 154 aa10.68□□□□□ -0.7
TPM1-228ENST00000560975 A0A0G2JQZ4 141 aa10.68□□□□□ -0.7
TPM1-228ENST00000560975 A0A1W2PNN7 141 aa10.68□□□□□ -0.7
TPM1-228ENST00000560975 DEFB116Q30KQ4 102 aa10.67□□□□□ -0.7
TPM1-228ENST00000560975 TRAV22A0A0B4J277 110 aa10.67□□□□□ -0.7
TPM1-228ENST00000560975 PRR15Q8IV56 129 aa10.67□□□□□ -0.7
TPM1-228ENST00000560975 FAM168BA1KXE4 195 aa10.67□□□□□ -0.7
TPM1-228ENST00000560975 Q6ZRX8 168 aa10.66□□□□□ -0.7
TPM1-228ENST00000560975 DHRS4-AS1Q9P1J3 65 aa10.65□□□□□ -0.7
TPM1-228ENST00000560975 ITPR2Q14571 2701 aa10.64□□□□□ -0.71
TPM1-228ENST00000560975 TENM1Q9UKZ4 2725 aa10.64□□□□□ -0.71
TPM1-228ENST00000560975 TNP2Q05952 138 aa10.64□□□□□ -0.71
TPM1-228ENST00000560975 PMAIP1Q13794 54 aa10.63□□□□□ -0.71
TPM1-228ENST00000560975 WFDC13Q8IUB5 93 aa10.63□□□□□ -0.71
TPM1-228ENST00000560975 HCG22E2RYF7 251 aa10.63□□□□□ -0.71
TPM1-228ENST00000560975 SMR3AQ99954 134 aa10.63□□□□□ -0.71
TPM1-228ENST00000560975 A8MUN3 132 aa10.62□□□□□ -0.71
TPM1-228ENST00000560975 TRRAPQ9Y4A5 3859 aa10.62□□□□□ -0.71
TPM1-228ENST00000560975 TEP1Q99973 2627 aaKnown RBP10.6□□□□□ -0.71
TPM1-228ENST00000560975 A8MU10 97 aa10.6□□□□□ -0.71
TPM1-228ENST00000560975 SPRR4Q96PI1 79 aa10.6□□□□□ -0.71
TPM1-228ENST00000560975 NOTCH2Q04721 2471 aa10.6□□□□□ -0.71
TPM1-228ENST00000560975 A0A1B0GW54 56 aa10.6□□□□□ -0.71
TPM1-228ENST00000560975 PSCAO43653 123 aa10.6□□□□□ -0.71
TPM1-228ENST00000560975 UBE2BP63146 152 aa10.6□□□□□ -0.71
TPM1-228ENST00000560975 RETNQ9HD89 108 aa10.59□□□□□ -0.71
TPM1-228ENST00000560975 PDZD2O15018 2839 aa10.58□□□□□ -0.72
TPM1-228ENST00000560975 KRTAP4-16G5E9R7 235 aaPredicted RBP10.58□□□□□ -0.72
TPM1-228ENST00000560975 CYP4F30PQ9H0H9 118 aa10.58□□□□□ -0.72
TPM1-228ENST00000560975 IGLV1-50A0A075B6I6 118 aa10.57□□□□□ -0.72
TPM1-228ENST00000560975 ATRQ13535 2644 aa10.57□□□□□ -0.72
TPM1-228ENST00000560975 LINC00208Q96KT6 92 aa10.56□□□□□ -0.72
TPM1-228ENST00000560975 LINC00476Q8WZB0 136 aa10.55□□□□□ -0.72
TPM1-228ENST00000560975 BAHCC1Q9P281 2608 aa10.55□□□□□ -0.72
TPM1-228ENST00000560975 RPL37AP61513 92 aaKnown RBP10.54□□□□□ -0.72
TPM1-228ENST00000560975 MP68P56378 58 aa10.54□□□□□ -0.72
TPM1-228ENST00000560975 KRTAP7-1Q8IUC3 87 aa10.53□□□□□ -0.72
TPM1-228ENST00000560975 SPRR1AP35321 89 aa10.52□□□□□ -0.73
TPM1-228ENST00000560975 B9D2Q9BPU9 175 aa10.52□□□□□ -0.73
TPM1-228ENST00000560975 NDUFB1O75438 58 aa10.51□□□□□ -0.73
TPM1-228ENST00000560975 A0A087WSZ3 146 aa10.5□□□□□ -0.73
TPM1-228ENST00000560975 CASC10Q5T4H9 136 aa10.5□□□□□ -0.73
TPM1-228ENST00000560975 TENM4Q6N022 2769 aa10.5□□□□□ -0.73
TPM1-228ENST00000560975 IGFL1Q6UW32 110 aa10.5□□□□□ -0.73
TPM1-228ENST00000560975 Q5VV11 94 aa10.49□□□□□ -0.73
TPM1-228ENST00000560975 FASNP49327 2511 aaKnown RBP10.48□□□□□ -0.73
TPM1-228ENST00000560975 LINC01556Q5JQF7 62 aa10.48□□□□□ -0.73
TPM1-228ENST00000560975 MRPL55Q7Z7F7 128 aaKnown RBP10.48□□□□□ -0.73
TPM1-228ENST00000560975 TENM3Q9P273 2699 aa10.48□□□□□ -0.73
TPM1-228ENST00000560975 PLA2G2DQ9UNK4 145 aa10.47□□□□□ -0.73
TPM1-228ENST00000560975 CHKB-CPT1BH3BT56 60 aa10.47□□□□□ -0.73
TPM1-228ENST00000560975 H3BNG1 76 aa10.46□□□□□ -0.74
TPM1-228ENST00000560975 TLX1NBP0CAT3 122 aa10.46□□□□□ -0.74
TPM1-228ENST00000560975 H0Y9P7 68 aa10.45□□□□□ -0.74
TPM1-228ENST00000560975 REG3GQ6UW15 175 aa10.44□□□□□ -0.74
TPM1-228ENST00000560975 PRR15LQ9BU68 103 aa10.44□□□□□ -0.74
TPM1-228ENST00000560975 IGLV5-37A0A075B6J1 123 aa10.44□□□□□ -0.74
TPM1-228ENST00000560975 PRLHP81277 87 aa10.44□□□□□ -0.74
TPM1-228ENST00000560975 Q8N9P0 234 aaPredicted RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms