RNA–Protein interactions for RNA: ENST00000559774.6

LRRC28-215, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-215ENST00000559774 KRTAP11-1Q8IUC1 163 aa5.35□□□□□ -1.55
LRRC28-215ENST00000559774 LINC00337Q8N6G1 96 aa5.35□□□□□ -1.55
LRRC28-215ENST00000559774 TRAV23DV6A0A075B6W5 121 aa5.34□□□□□ -1.55
LRRC28-215ENST00000559774 A0A0B4J2C4 111 aa5.34□□□□□ -1.55
LRRC28-215ENST00000559774 IGLV7-43P04211 117 aa5.34□□□□□ -1.55
LRRC28-215ENST00000559774 RPL28P46779 137 aaKnown RBP5.34□□□□□ -1.55
LRRC28-215ENST00000559774 SPINK6Q6UWN8 80 aa5.34□□□□□ -1.55
LRRC28-215ENST00000559774 OR13C6PQ8NH95 151 aa5.34□□□□□ -1.55
LRRC28-215ENST00000559774 PRO1933Q9H354 126 aa5.34□□□□□ -1.55
LRRC28-215ENST00000559774 TRBV7-6A0A0J9YX20 115 aa5.33□□□□□ -1.56
LRRC28-215ENST00000559774 A6NDN8 102 aa5.33□□□□□ -1.56
LRRC28-215ENST00000559774 KRTAP4-16G5E9R7 235 aaPredicted RBP5.33□□□□□ -1.56
LRRC28-215ENST00000559774 ZNF73O43830 326 aaPredicted RBP5.33□□□□□ -1.56
LRRC28-215ENST00000559774 ZNF861PO60384 105 aa5.33□□□□□ -1.56
LRRC28-215ENST00000559774 HINT1P49773 126 aaPredicted RBP5.33□□□□□ -1.56
LRRC28-215ENST00000559774 SRRM2Q9UQ35 2752 aaKnown RBP5.33□□□□□ -1.56
LRRC28-215ENST00000559774 VPS13BQ7Z7G8 4022 aa5.33□□□□□ -1.56
LRRC28-215ENST00000559774 M0R143 59 aa5.32□□□□□ -1.56
LRRC28-215ENST00000559774 CFC1BP0CG36 223 aa5.32□□□□□ -1.56
LRRC28-215ENST00000559774 CFC1P0CG37 223 aa5.32□□□□□ -1.56
LRRC28-215ENST00000559774 KRTAP13-1Q8IUC0 172 aa5.32□□□□□ -1.56
LRRC28-215ENST00000559774 ETDCA0A1B0GVM5 59 aa5.31□□□□□ -1.56
LRRC28-215ENST00000559774 A0A1B0GWB2 263 aa5.31□□□□□ -1.56
LRRC28-215ENST00000559774 UBE2AP49459 152 aa5.31□□□□□ -1.56
LRRC28-215ENST00000559774 FAM19A1Q7Z5A9 133 aa5.31□□□□□ -1.56
LRRC28-215ENST00000559774 DIRC1Q969H9 104 aa5.31□□□□□ -1.56
LRRC28-215ENST00000559774 RAB37Q96AX2 223 aa5.31□□□□□ -1.56
LRRC28-215ENST00000559774 KRTAP17-1Q9BYP8 105 aa5.31□□□□□ -1.56
LRRC28-215ENST00000559774 INAFM2P0DMQ5 153 aa5.3□□□□□ -1.56
LRRC28-215ENST00000559774 FXYD2P54710 66 aa5.3□□□□□ -1.56
LRRC28-215ENST00000559774 PRO1854Q9UHT4 67 aa5.3□□□□□ -1.56
LRRC28-215ENST00000559774 B5MCH6 92 aa5.29□□□□□ -1.56
LRRC28-215ENST00000559774 CTAG1AP78358 180 aa5.29□□□□□ -1.56
LRRC28-215ENST00000559774 VAMP3Q15836 100 aa5.29□□□□□ -1.56
LRRC28-215ENST00000559774 BVES-AS1Q5T3Y7 98 aa5.29□□□□□ -1.56
LRRC28-215ENST00000559774 Q6ZRX8 168 aa5.29□□□□□ -1.56
LRRC28-215ENST00000559774 SMIM11BQ8TCY0 68 aa5.29□□□□□ -1.56
LRRC28-215ENST00000559774 RPL13AP40429 203 aaKnown RBP5.28□□□□□ -1.56
LRRC28-215ENST00000559774 ELOF1P60002 83 aaKnown RBP5.28□□□□□ -1.56
LRRC28-215ENST00000559774 C6orf99Q4VX62 202 aa5.28□□□□□ -1.56
LRRC28-215ENST00000559774 DHRS4-AS1Q9P1J3 65 aa5.28□□□□□ -1.56
LRRC28-215ENST00000559774 COX7BP24311 80 aa5.27□□□□□ -1.57
LRRC28-215ENST00000559774 PRLHP81277 87 aa5.27□□□□□ -1.57
LRRC28-215ENST00000559774 KRTAP4-5Q9BYR2 181 aa5.27□□□□□ -1.57
LRRC28-215ENST00000559774 NHP2Q9NX24 153 aaKnown RBP5.27□□□□□ -1.57
LRRC28-215ENST00000559774 ZNF706Q9Y5V0 76 aaPredicted RBP5.26□□□□□ -1.57
LRRC28-215ENST00000559774 H0YGX0 51 aa5.25□□□□□ -1.57
LRRC28-215ENST00000559774 SNCGO76070 127 aa5.25□□□□□ -1.57
LRRC28-215ENST00000559774 OXTP01178 125 aa5.25□□□□□ -1.57
LRRC28-215ENST00000559774 SMCR5Q8TEV8 140 aa5.25□□□□□ -1.57
LRRC28-215ENST00000559774 HIGD2AQ9BW72 106 aa5.25□□□□□ -1.57
LRRC28-215ENST00000559774 SLC25A20O43772 301 aa5.24□□□□□ -1.57
LRRC28-215ENST00000559774 Q9BRP9 147 aa5.24□□□□□ -1.57
LRRC28-215ENST00000559774 A0A1B0GX51 115 aa5.23□□□□□ -1.57
LRRC28-215ENST00000559774 COX6CP09669 75 aa5.23□□□□□ -1.57
LRRC28-215ENST00000559774 Q1RN00 199 aa5.23□□□□□ -1.57
LRRC28-215ENST00000559774 LINC00575Q6W349 94 aa5.23□□□□□ -1.57
LRRC28-215ENST00000559774 KRTAP29-1A8MX34 341 aaPredicted RBP5.22□□□□□ -1.57
LRRC28-215ENST00000559774 H7C2G1 150 aa5.22□□□□□ -1.57
LRRC28-215ENST00000559774 K7ERJ3 54 aa5.22□□□□□ -1.57
LRRC28-215ENST00000559774 FAM229BQ4G0N7 80 aa5.22□□□□□ -1.57
LRRC28-215ENST00000559774 LINC01600Q96MT4 127 aa5.22□□□□□ -1.57
LRRC28-215ENST00000559774 hADV29S1A0JD25 119 aa5.21□□□□□ -1.58
LRRC28-215ENST00000559774 TSPAN13O95857 204 aa5.21□□□□□ -1.58
LRRC28-215ENST00000559774 GHRHP01286 108 aa5.21□□□□□ -1.58
LRRC28-215ENST00000559774 KRTAP1-4P0C5Y4 121 aa5.21□□□□□ -1.58
LRRC28-215ENST00000559774 LINC00483Q53H64 154 aa5.21□□□□□ -1.58
LRRC28-215ENST00000559774 SPRR4Q96PI1 79 aa5.21□□□□□ -1.58
LRRC28-215ENST00000559774 TRIAP1O43715 76 aa5.2□□□□□ -1.58
LRRC28-215ENST00000559774 ERC2-IT1O76042 136 aa5.2□□□□□ -1.58
LRRC28-215ENST00000559774 SPRR1BP22528 89 aa5.2□□□□□ -1.58
LRRC28-215ENST00000559774 PSMB2P49721 201 aa5.2□□□□□ -1.58
LRRC28-215ENST00000559774 PKHD1L1Q86WI1 4243 aa5.19□□□□□ -1.58
LRRC28-215ENST00000559774 ABCA13Q86UQ4 5058 aa5.19□□□□□ -1.58
LRRC28-215ENST00000559774 CRYGAP11844 174 aa5.19□□□□□ -1.58
LRRC28-215ENST00000559774 OCIAD2Q56VL3 154 aa5.19□□□□□ -1.58
LRRC28-215ENST00000559774 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.19□□□□□ -1.58
LRRC28-215ENST00000559774 PPDPFLQ8WWR9 84 aa5.19□□□□□ -1.58
LRRC28-215ENST00000559774 IGLV5-48A0A075B6I7 105 aa5.18□□□□□ -1.58
LRRC28-215ENST00000559774 H3BQ85 93 aa5.18□□□□□ -1.58
LRRC28-215ENST00000559774 BATFQ16520 125 aa5.18□□□□□ -1.58
LRRC28-215ENST00000559774 LYRM7Q5U5X0 104 aa5.18□□□□□ -1.58
LRRC28-215ENST00000559774 MYCBP2O75592 4640 aa5.17□□□□□ -1.58
LRRC28-215ENST00000559774 TEX49A0A1B0GTD5 131 aa5.17□□□□□ -1.58
LRRC28-215ENST00000559774 KRTAP10-8P60410 259 aa5.17□□□□□ -1.58
LRRC28-215ENST00000559774 SNHG12Q9BXW3 62 aa5.17□□□□□ -1.58
LRRC28-215ENST00000559774 SCGB1C2P0DMR2 95 aa5.16□□□□□ -1.58
LRRC28-215ENST00000559774 COL5A1-AS1Q5SY13 56 aa5.16□□□□□ -1.58
LRRC28-215ENST00000559774 GAGE2AQ6NT46 116 aa5.16□□□□□ -1.58
LRRC28-215ENST00000559774 ST20-AS1Q8NBB2 130 aa5.16□□□□□ -1.58
LRRC28-215ENST00000559774 TRBV20-1A0A075B6N2 111 aa5.15□□□□□ -1.59
LRRC28-215ENST00000559774 C9orf118A6NHY6 69 aa5.15□□□□□ -1.59
LRRC28-215ENST00000559774 TRACP01848 142 aa5.15□□□□□ -1.59
LRRC28-215ENST00000559774 LINC01547P58512 204 aaPredicted RBP5.15□□□□□ -1.59
LRRC28-215ENST00000559774 Q6ZQY7 126 aa5.15□□□□□ -1.59
LRRC28-215ENST00000559774 FAM218AQ96MZ4 157 aa5.15□□□□□ -1.59
LRRC28-215ENST00000559774 LAMTOR3Q9UHA4 124 aa5.15□□□□□ -1.59
LRRC28-215ENST00000559774 FLG2Q5D862 2391 aaPredicted RBP5.14□□□□□ -1.59
LRRC28-215ENST00000559774 FAT3Q8TDW7 4589 aa5.14□□□□□ -1.59
LRRC28-215ENST00000559774 A0A087X002 238 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms