RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.25□□□□□ -1.25
CARMIL3-202ENST00000559694 DCHS2Q6V1P9 2916 aa7.25□□□□□ -1.25
CARMIL3-202ENST00000559694 NF1P21359 2839 aa7.25□□□□□ -1.25
CARMIL3-202ENST00000559694 LINC01547P58512 204 aaPredicted RBP7.25□□□□□ -1.25
CARMIL3-202ENST00000559694 C2orf48Q96LS8 159 aa7.25□□□□□ -1.25
CARMIL3-202ENST00000559694 PRO0628Q9UI54 55 aa7.24□□□□□ -1.25
CARMIL3-202ENST00000559694 WIPF1O43516 503 aa7.24□□□□□ -1.25
CARMIL3-202ENST00000559694 TRBV10-3A0A0K0K1G6 114 aa7.23□□□□□ -1.25
CARMIL3-202ENST00000559694 FAM30AQ9NZY2 134 aa7.23□□□□□ -1.25
CARMIL3-202ENST00000559694 TMEM254Q8TBM7 123 aa7.23□□□□□ -1.25
CARMIL3-202ENST00000559694 TRBV7-6A0A0J9YX20 115 aa7.22□□□□□ -1.25
CARMIL3-202ENST00000559694 KMT2BQ9UMN6 2715 aaPredicted RBP7.22□□□□□ -1.25
CARMIL3-202ENST00000559694 LINC00575Q6W349 94 aa7.22□□□□□ -1.25
CARMIL3-202ENST00000559694 LINC00612Q8N6U2 182 aa7.22□□□□□ -1.25
CARMIL3-202ENST00000559694 PRYO14603 147 aa7.21□□□□□ -1.26
CARMIL3-202ENST00000559694 DNAH10OSP0CZ25 163 aa7.21□□□□□ -1.26
CARMIL3-202ENST00000559694 NDUFB1O75438 58 aa7.2□□□□□ -1.26
CARMIL3-202ENST00000559694 MRPL55Q7Z7F7 128 aaKnown RBP7.2□□□□□ -1.26
CARMIL3-202ENST00000559694 LINC01561Q8N1V8 128 aa7.2□□□□□ -1.26
CARMIL3-202ENST00000559694 ASH1LQ9NR48 2969 aaKnown RBP7.2□□□□□ -1.26
CARMIL3-202ENST00000559694 WFDC13Q8IUB5 93 aa7.19□□□□□ -1.26
CARMIL3-202ENST00000559694 H0Y9J4 135 aa7.18□□□□□ -1.26
CARMIL3-202ENST00000559694 F8WDY8 70 aa7.18□□□□□ -1.26
CARMIL3-202ENST00000559694 C10orf25Q5T742 122 aa7.18□□□□□ -1.26
CARMIL3-202ENST00000559694 Q8N9L7 120 aa7.18□□□□□ -1.26
CARMIL3-202ENST00000559694 CXCL6P80162 114 aa7.16□□□□□ -1.26
CARMIL3-202ENST00000559694 C6orf48Q9UBA6 75 aa7.15□□□□□ -1.26
CARMIL3-202ENST00000559694 FBN2P35556 2912 aa7.15□□□□□ -1.26
CARMIL3-202ENST00000559694 PSPHP1O15172 72 aa7.15□□□□□ -1.26
CARMIL3-202ENST00000559694 DHRS4-AS1Q9P1J3 65 aa7.15□□□□□ -1.27
CARMIL3-202ENST00000559694 C1orf137Q5JT78 98 aa7.15□□□□□ -1.27
CARMIL3-202ENST00000559694 CHKB-CPT1BH3BT56 60 aa7.14□□□□□ -1.27
CARMIL3-202ENST00000559694 BCE1O60756 84 aa7.13□□□□□ -1.27
CARMIL3-202ENST00000559694 REG3GQ6UW15 175 aa7.13□□□□□ -1.27
CARMIL3-202ENST00000559694 C22orf24Q9Y442 160 aa7.13□□□□□ -1.27
CARMIL3-202ENST00000559694 PMAIP1Q13794 54 aa7.13□□□□□ -1.27
CARMIL3-202ENST00000559694 APLNQ9ULZ1 77 aa7.13□□□□□ -1.27
CARMIL3-202ENST00000559694 A6NED7 52 aa7.13□□□□□ -1.27
CARMIL3-202ENST00000559694 C16orf90A8MZG2 172 aa7.13□□□□□ -1.27
CARMIL3-202ENST00000559694 Q6ZQT0 140 aa7.12□□□□□ -1.27
CARMIL3-202ENST00000559694 IGLV9-49A0A0B4J1Y8 123 aa7.12□□□□□ -1.27
CARMIL3-202ENST00000559694 RTL8CO15255 209 aa7.12□□□□□ -1.27
CARMIL3-202ENST00000559694 ZFHX4Q86UP3 3567 aa7.12□□□□□ -1.27
CARMIL3-202ENST00000559694 ZNF706Q9Y5V0 76 aaPredicted RBP7.11□□□□□ -1.27
CARMIL3-202ENST00000559694 LINC00208Q96KT6 92 aa7.11□□□□□ -1.27
CARMIL3-202ENST00000559694 C9orf129Q5T035 196 aaKnown RBP7.1□□□□□ -1.27
CARMIL3-202ENST00000559694 PRR34Q9NV39 138 aa7.1□□□□□ -1.27
CARMIL3-202ENST00000559694 IGKV4-1P06312 121 aa7.1□□□□□ -1.27
CARMIL3-202ENST00000559694 CHTF8P0CG12 524 aa7.1□□□□□ -1.27
CARMIL3-202ENST00000559694 LINC01600Q96MT4 127 aa7.1□□□□□ -1.27
CARMIL3-202ENST00000559694 PRLHP81277 87 aa7.09□□□□□ -1.27
CARMIL3-202ENST00000559694 GVQW2A0A096LPI5 108 aaPredicted RBP7.08□□□□□ -1.28
CARMIL3-202ENST00000559694 STAB2Q8WWQ8 2551 aa7.08□□□□□ -1.28
CARMIL3-202ENST00000559694 LINC00167Q96N53 147 aa7.08□□□□□ -1.28
CARMIL3-202ENST00000559694 LINC00336Q6ZUF6 198 aa7.07□□□□□ -1.28
CARMIL3-202ENST00000559694 LOC110117498A0A087WWA1 95 aa7.07□□□□□ -1.28
CARMIL3-202ENST00000559694 SEC61GP60059 68 aa7.07□□□□□ -1.28
CARMIL3-202ENST00000559694 MXRA5Q9NR99 2828 aa7.06□□□□□ -1.28
CARMIL3-202ENST00000559694 SPINK6Q6UWN8 80 aa7.06□□□□□ -1.28
CARMIL3-202ENST00000559694 PRR15LQ9BU68 103 aa7.06□□□□□ -1.28
CARMIL3-202ENST00000559694 SMIM29Q86T20 159 aa7.05□□□□□ -1.28
CARMIL3-202ENST00000559694 PHF5AQ7RTV0 110 aaKnown RBP7.05□□□□□ -1.28
CARMIL3-202ENST00000559694 Q6ZRP5 223 aa7.04□□□□□ -1.28
CARMIL3-202ENST00000559694 DEFB116Q30KQ4 102 aa7.04□□□□□ -1.28
CARMIL3-202ENST00000559694 A0A087WTM6 91 aa7.03□□□□□ -1.28
CARMIL3-202ENST00000559694 H7BZZ5 65 aa7.03□□□□□ -1.28
CARMIL3-202ENST00000559694 CASC10Q5T4H9 136 aa7.03□□□□□ -1.28
CARMIL3-202ENST00000559694 KLKP1Q107X0 134 aa7.03□□□□□ -1.28
CARMIL3-202ENST00000559694 CIRBP-AS1Q8TBR5 109 aa7.03□□□□□ -1.28
CARMIL3-202ENST00000559694 LINC00476Q8WZB0 136 aa7.03□□□□□ -1.28
CARMIL3-202ENST00000559694 C15orf56Q8N910 161 aa7.02□□□□□ -1.29
CARMIL3-202ENST00000559694 KIAA0087Q14695 138 aa7.01□□□□□ -1.29
CARMIL3-202ENST00000559694 SMG1Q96Q15 3661 aaKnown RBP7□□□□□ -1.29
CARMIL3-202ENST00000559694 A0A087WSZ3 146 aa7□□□□□ -1.29
CARMIL3-202ENST00000559694 HCG22E2RYF7 251 aa7□□□□□ -1.29
CARMIL3-202ENST00000559694 FAM229AH3BQW9 127 aa7□□□□□ -1.29
CARMIL3-202ENST00000559694 ELOF1P60002 83 aaKnown RBP6.99□□□□□ -1.29
CARMIL3-202ENST00000559694 BSNQ9UPA5 3926 aa6.99□□□□□ -1.29
CARMIL3-202ENST00000559694 FAM168BA1KXE4 195 aa6.99□□□□□ -1.29
CARMIL3-202ENST00000559694 FAM104AQ969W3 186 aa6.99□□□□□ -1.29
CARMIL3-202ENST00000559694 Q9BRP9 147 aa6.99□□□□□ -1.29
CARMIL3-202ENST00000559694 CASC2Q6XLA1 102 aa6.98□□□□□ -1.29
CARMIL3-202ENST00000559694 C9orf163Q8N9P6 203 aa6.98□□□□□ -1.29
CARMIL3-202ENST00000559694 H0Y9P7 68 aa6.97□□□□□ -1.29
CARMIL3-202ENST00000559694 CYSTM1Q9H1C7 97 aa6.97□□□□□ -1.29
CARMIL3-202ENST00000559694 IGLV6-57P01721 117 aa6.96□□□□□ -1.3
CARMIL3-202ENST00000559694 PCOTHQ58A44 107 aa6.96□□□□□ -1.3
CARMIL3-202ENST00000559694 TNP2Q05952 138 aa6.95□□□□□ -1.3
CARMIL3-202ENST00000559694 VPREB1P12018 145 aa6.95□□□□□ -1.3
CARMIL3-202ENST00000559694 SERTAD4-AS1Q5TG53 156 aa6.95□□□□□ -1.3
CARMIL3-202ENST00000559694 hDV103S1A0JD37 113 aa6.95□□□□□ -1.3
CARMIL3-202ENST00000559694 OBSCN-AS1Q96MR7 158 aa6.95□□□□□ -1.3
CARMIL3-202ENST00000559694 PDZD2O15018 2839 aa6.95□□□□□ -1.3
CARMIL3-202ENST00000559694 OTOGQ6ZRI0 2925 aa6.94□□□□□ -1.3
CARMIL3-202ENST00000559694 SMR3BP02814 79 aaPredicted RBP6.94□□□□□ -1.3
CARMIL3-202ENST00000559694 ERC2-IT1O76042 136 aa6.93□□□□□ -1.3
CARMIL3-202ENST00000559694 LIMD2Q9BT23 127 aa6.92□□□□□ -1.3
CARMIL3-202ENST00000559694 EPM2AB3EWF7 344 aa6.92□□□□□ -1.3
CARMIL3-202ENST00000559694 SPENQ96T58 3664 aaKnown RBP6.92□□□□□ -1.3
CARMIL3-202ENST00000559694 Q8NBF4 154 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms