RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 IFITM1P13164 125 aa3.28□□□□□ -1.88
SMAD3-209ENST00000558894 NDUFV3P56181 108 aaKnown RBP3.28□□□□□ -1.88
SMAD3-209ENST00000558894 SEC61GP60059 68 aa3.28□□□□□ -1.88
SMAD3-209ENST00000558894 C6orf226Q5I0X4 101 aa3.28□□□□□ -1.88
SMAD3-209ENST00000558894 KRTAP13-1Q8IUC0 172 aa3.28□□□□□ -1.88
SMAD3-209ENST00000558894 TOMM7Q9P0U1 55 aa3.28□□□□□ -1.88
SMAD3-209ENST00000558894 IGLV5-37A0A075B6J1 123 aa3.27□□□□□ -1.89
SMAD3-209ENST00000558894 UBE2BP63146 152 aa3.27□□□□□ -1.89
SMAD3-209ENST00000558894 LYRM7Q5U5X0 104 aa3.27□□□□□ -1.89
SMAD3-209ENST00000558894 PPDPFLQ8WWR9 84 aa3.27□□□□□ -1.89
SMAD3-209ENST00000558894 CHCHD1Q96BP2 118 aaKnown RBP3.27□□□□□ -1.89
SMAD3-209ENST00000558894 LINC00167Q96N53 147 aa3.27□□□□□ -1.89
SMAD3-209ENST00000558894 HIGD1BQ9P298 99 aa3.27□□□□□ -1.89
SMAD3-209ENST00000558894 TP73-AS1Q9UF72 201 aa3.27□□□□□ -1.89
SMAD3-209ENST00000558894 IGLV5-39A0A0G2JS06 123 aa3.26□□□□□ -1.89
SMAD3-209ENST00000558894 HSBP1O75506 76 aa3.26□□□□□ -1.89
SMAD3-209ENST00000558894 PRSS2P07478 247 aa3.26□□□□□ -1.89
SMAD3-209ENST00000558894 SMIM13P0DJ93 91 aa3.26□□□□□ -1.89
SMAD3-209ENST00000558894 TAL2Q16559 108 aa3.26□□□□□ -1.89
SMAD3-209ENST00000558894 PAPPA-AS1Q5QFB9 102 aa3.26□□□□□ -1.89
SMAD3-209ENST00000558894 MRPL55Q7Z7F7 128 aaKnown RBP3.26□□□□□ -1.89
SMAD3-209ENST00000558894 Q8NDZ9 215 aa3.26□□□□□ -1.89
SMAD3-209ENST00000558894 COX7B2Q8TF08 81 aa3.26□□□□□ -1.89
SMAD3-209ENST00000558894 RAB37Q96AX2 223 aa3.26□□□□□ -1.89
SMAD3-209ENST00000558894 SCGB3A1Q96QR1 104 aa3.26□□□□□ -1.89
SMAD3-209ENST00000558894 PRO0628Q9UI54 55 aa3.26□□□□□ -1.89
SMAD3-209ENST00000558894 RPL37AP8A6NKH3 93 aa3.25□□□□□ -1.89
SMAD3-209ENST00000558894 C9JAW5 83 aa3.25□□□□□ -1.89
SMAD3-209ENST00000558894 E9PLD3 99 aa3.25□□□□□ -1.89
SMAD3-209ENST00000558894 BCE1O60756 84 aa3.25□□□□□ -1.89
SMAD3-209ENST00000558894 SNCGO76070 127 aa3.25□□□□□ -1.89
SMAD3-209ENST00000558894 RPL13AP40429 203 aaKnown RBP3.25□□□□□ -1.89
SMAD3-209ENST00000558894 CXCL5P42830 114 aa3.25□□□□□ -1.89
SMAD3-209ENST00000558894 KRTAP13-2Q52LG2 175 aa3.25□□□□□ -1.89
SMAD3-209ENST00000558894 MEIG1Q5JSS6 88 aa3.25□□□□□ -1.89
SMAD3-209ENST00000558894 XP32Q5T750 250 aa3.25□□□□□ -1.89
SMAD3-209ENST00000558894 C2orf91Q6ZV80 131 aa3.25□□□□□ -1.89
SMAD3-209ENST00000558894 IMUPQ9GZP8 106 aa3.25□□□□□ -1.89
SMAD3-209ENST00000558894 V9GYY9 64 aa3.25□□□□□ -1.89
SMAD3-209ENST00000558894 MT-ATP8P03928 68 aa3.24□□□□□ -1.89
SMAD3-209ENST00000558894 ZNF22P17026 224 aaPredicted RBP3.24□□□□□ -1.89
SMAD3-209ENST00000558894 LINC01545Q5VT33 79 aa3.24□□□□□ -1.89
SMAD3-209ENST00000558894 ANAPC11Q9NYG5 84 aa3.24□□□□□ -1.89
SMAD3-209ENST00000558894 PRO0461Q9UI25 63 aa3.24□□□□□ -1.89
SMAD3-209ENST00000558894 LINC01549A6NIU2 74 aa3.23□□□□□ -1.89
SMAD3-209ENST00000558894 CCDC179H3BU77 68 aa3.23□□□□□ -1.89
SMAD3-209ENST00000558894 UQCRQO14949 82 aa3.23□□□□□ -1.89
SMAD3-209ENST00000558894 VPREB1P12018 145 aa3.23□□□□□ -1.89
SMAD3-209ENST00000558894 ETDBQ3ZM63 59 aa3.23□□□□□ -1.89
SMAD3-209ENST00000558894 TEN1Q86WV5 123 aa3.23□□□□□ -1.89
SMAD3-209ENST00000558894 ATOH7Q8N100 152 aa3.23□□□□□ -1.89
SMAD3-209ENST00000558894 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.22□□□□□ -1.89
SMAD3-209ENST00000558894 LEPROTL1O95214 131 aa3.22□□□□□ -1.89
SMAD3-209ENST00000558894 RPL28P46779 137 aaKnown RBP3.22□□□□□ -1.89
SMAD3-209ENST00000558894 TMEM258P61165 79 aa3.22□□□□□ -1.89
SMAD3-209ENST00000558894 ZNF625Q96I27 306 aaPredicted RBP3.22□□□□□ -1.89
SMAD3-209ENST00000558894 SND1-IT1Q9HBX3 110 aa3.22□□□□□ -1.89
SMAD3-209ENST00000558894 TRBV20-1A0A075B6N2 111 aa3.21□□□□□ -1.9
SMAD3-209ENST00000558894 IGKV2-28A0A075B6P5 120 aa3.21□□□□□ -1.9
SMAD3-209ENST00000558894 A0A1B0GWB2 263 aa3.21□□□□□ -1.9
SMAD3-209ENST00000558894 C11orf86A6NJI1 115 aa3.21□□□□□ -1.9
SMAD3-209ENST00000558894 M0R378 163 aa3.21□□□□□ -1.9
SMAD3-209ENST00000558894 IGKV2D-28P01615 120 aa3.21□□□□□ -1.9
SMAD3-209ENST00000558894 CRYGAP11844 174 aa3.21□□□□□ -1.9
SMAD3-209ENST00000558894 PFN2P35080 140 aa3.21□□□□□ -1.9
SMAD3-209ENST00000558894 PRLHP81277 87 aa3.21□□□□□ -1.9
SMAD3-209ENST00000558894 PRR4Q16378 134 aa3.21□□□□□ -1.9
SMAD3-209ENST00000558894 FAM229BQ4G0N7 80 aa3.21□□□□□ -1.9
SMAD3-209ENST00000558894 PLEKHB2Q96CS7 222 aa3.21□□□□□ -1.9
SMAD3-209ENST00000558894 TRBV7-7A0A0K0K1E9 115 aa3.2□□□□□ -1.9
SMAD3-209ENST00000558894 FAM240AA0A1B0GVK7 77 aa3.2□□□□□ -1.9
SMAD3-209ENST00000558894 ATP5LO75964 103 aa3.2□□□□□ -1.9
SMAD3-209ENST00000558894 HBDP02042 147 aa3.2□□□□□ -1.9
SMAD3-209ENST00000558894 COX17Q14061 63 aa3.2□□□□□ -1.9
SMAD3-209ENST00000558894 C3orf22Q8N5N4 141 aa3.2□□□□□ -1.9
SMAD3-209ENST00000558894 TYMSOSQ8TAI1 123 aa3.2□□□□□ -1.9
SMAD3-209ENST00000558894 TMEM223A0PJW6 202 aa3.19□□□□□ -1.9
SMAD3-209ENST00000558894 KRTAP4-16G5E9R7 235 aaPredicted RBP3.19□□□□□ -1.9
SMAD3-209ENST00000558894 C9orf153Q5TBE3 101 aa3.19□□□□□ -1.9
SMAD3-209ENST00000558894 FAM19A2Q8N3H0 131 aa3.19□□□□□ -1.9
SMAD3-209ENST00000558894 NKAPP1Q8N9T2 125 aa3.19□□□□□ -1.9
SMAD3-209ENST00000558894 RETNLBQ9BQ08 111 aa3.19□□□□□ -1.9
SMAD3-209ENST00000558894 SSPOA2VEC9 5147 aa3.18□□□□□ -1.9
SMAD3-209ENST00000558894 TRAV12-1A0A0B4J245 112 aa3.18□□□□□ -1.9
SMAD3-209ENST00000558894 DPM2O94777 84 aa3.18□□□□□ -1.9
SMAD3-209ENST00000558894 SCGB1C2P0DMR2 95 aa3.18□□□□□ -1.9
SMAD3-209ENST00000558894 SPRR1AP35321 89 aa3.18□□□□□ -1.9
SMAD3-209ENST00000558894 NMUP48645 174 aa3.18□□□□□ -1.9
SMAD3-209ENST00000558894 UBE2AP49459 152 aa3.18□□□□□ -1.9
SMAD3-209ENST00000558894 CEND1Q8N111 149 aa3.18□□□□□ -1.9
SMAD3-209ENST00000558894 LINC00304Q8N9R0 145 aa3.18□□□□□ -1.9
SMAD3-209ENST00000558894 ACYP1P07311 99 aa3.17□□□□□ -1.9
SMAD3-209ENST00000558894 TMEM170BQ5T4T1 132 aa3.17□□□□□ -1.9
SMAD3-209ENST00000558894 FAM19A1Q7Z5A9 133 aa3.17□□□□□ -1.9
SMAD3-209ENST00000558894 COPS9Q8WXC6 57 aa3.17□□□□□ -1.9
SMAD3-209ENST00000558894 SPRR4Q96PI1 79 aa3.17□□□□□ -1.9
SMAD3-209ENST00000558894 LOC107984156A0A0G2JMH3 177 aa3.16□□□□□ -1.9
SMAD3-209ENST00000558894 A0A0U1RRA0 63 aa3.16□□□□□ -1.9
SMAD3-209ENST00000558894 NDUFC2O95298 119 aa3.16□□□□□ -1.9
SMAD3-209ENST00000558894 COX7CP15954 63 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms