RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 NKAPP1Q8N9T2 125 aa10.55□□□□□ -0.72
HMBOX1-212ENST00000558662 ST20-AS1Q8NBB2 130 aa10.55□□□□□ -0.72
HMBOX1-212ENST00000558662 C16orf90A8MZG2 172 aa10.54□□□□□ -0.72
HMBOX1-212ENST00000558662 Q6ZRX8 168 aa10.54□□□□□ -0.72
HMBOX1-212ENST00000558662 RBM12B-AS1Q9P1G2 102 aa10.54□□□□□ -0.72
HMBOX1-212ENST00000558662 MAP1AP78559 2803 aaPredicted RBP10.53□□□□□ -0.72
HMBOX1-212ENST00000558662 MYO18BQ8IUG5 2567 aa10.53□□□□□ -0.72
HMBOX1-212ENST00000558662 DEFB105AQ8NG35 78 aa10.52□□□□□ -0.72
HMBOX1-212ENST00000558662 DNAJC9-AS1A6NH13 148 aa10.52□□□□□ -0.73
HMBOX1-212ENST00000558662 COL12A1Q99715 3063 aa10.51□□□□□ -0.73
HMBOX1-212ENST00000558662 IGLV5-37A0A075B6J1 123 aa10.5□□□□□ -0.73
HMBOX1-212ENST00000558662 J3QKU1 62 aa10.49□□□□□ -0.73
HMBOX1-212ENST00000558662 SPRR1AP35321 89 aa10.49□□□□□ -0.73
HMBOX1-212ENST00000558662 MAPK1IP1LQ8NDC0 245 aa10.49□□□□□ -0.73
HMBOX1-212ENST00000558662 CDC42SE1Q9NRR8 79 aa10.49□□□□□ -0.73
HMBOX1-212ENST00000558662 FAM208BQ5VWN6 2430 aa10.49□□□□□ -0.73
HMBOX1-212ENST00000558662 A6NN06 94 aa10.49□□□□□ -0.73
HMBOX1-212ENST00000558662 PRR15LQ9BU68 103 aa10.49□□□□□ -0.73
HMBOX1-212ENST00000558662 KRTAP4-16G5E9R7 235 aaPredicted RBP10.48□□□□□ -0.73
HMBOX1-212ENST00000558662 KRTAP26-1Q6PEX3 210 aa10.47□□□□□ -0.73
HMBOX1-212ENST00000558662 C7orf33Q8WU49 177 aa10.47□□□□□ -0.73
HMBOX1-212ENST00000558662 CHD6Q8TD26 2715 aa10.47□□□□□ -0.73
HMBOX1-212ENST00000558662 TLX1NBP0CAT3 122 aa10.47□□□□□ -0.73
HMBOX1-212ENST00000558662 PRR4Q16378 134 aa10.47□□□□□ -0.73
HMBOX1-212ENST00000558662 IGKV2D-24A0A075B6R9 120 aa10.46□□□□□ -0.74
HMBOX1-212ENST00000558662 LRRK2Q5S007 2527 aa10.45□□□□□ -0.74
HMBOX1-212ENST00000558662 FBN2P35556 2912 aa10.45□□□□□ -0.74
HMBOX1-212ENST00000558662 SPART-AS1P0CW21 52 aa10.45□□□□□ -0.74
HMBOX1-212ENST00000558662 APOC4P55056 127 aa10.45□□□□□ -0.74
HMBOX1-212ENST00000558662 KRTAP10-9P60411 292 aa10.45□□□□□ -0.74
HMBOX1-212ENST00000558662 C15orf56Q8N910 161 aa10.45□□□□□ -0.74
HMBOX1-212ENST00000558662 KRTAP29-1A8MX34 341 aaPredicted RBP10.44□□□□□ -0.74
HMBOX1-212ENST00000558662 C7orf65Q6ZTY9 151 aa10.44□□□□□ -0.74
HMBOX1-212ENST00000558662 H0Y9P7 68 aa10.44□□□□□ -0.74
HMBOX1-212ENST00000558662 H3BNG1 76 aa10.44□□□□□ -0.74
HMBOX1-212ENST00000558662 A6NED7 52 aa10.43□□□□□ -0.74
HMBOX1-212ENST00000558662 C9orf163Q8N9P6 203 aa10.43□□□□□ -0.74
HMBOX1-212ENST00000558662 CRYBG3Q68DQ2 2970 aa10.42□□□□□ -0.74
HMBOX1-212ENST00000558662 IGLV8-61A0A075B6I0 122 aa10.42□□□□□ -0.74
HMBOX1-212ENST00000558662 LCA10Q71F78 164 aa10.42□□□□□ -0.74
HMBOX1-212ENST00000558662 USP9YO00507 2555 aaPredicted RBP10.41□□□□□ -0.74
HMBOX1-212ENST00000558662 IGLV1-50A0A075B6I6 118 aa10.41□□□□□ -0.74
HMBOX1-212ENST00000558662 SPTSSBQ8NFR3 76 aa10.41□□□□□ -0.74
HMBOX1-212ENST00000558662 UTP20O75691 2785 aaKnown RBP10.41□□□□□ -0.74
HMBOX1-212ENST00000558662 TLN2Q9Y4G6 2542 aa10.4□□□□□ -0.74
HMBOX1-212ENST00000558662 IGLV7-46A0A075B6I9 117 aa10.4□□□□□ -0.74
HMBOX1-212ENST00000558662 RPL37AP8A6NKH3 93 aa10.4□□□□□ -0.74
HMBOX1-212ENST00000558662 DEFB113Q30KQ7 82 aa10.4□□□□□ -0.74
HMBOX1-212ENST00000558662 SPG11Q96JI7 2443 aa10.39□□□□□ -0.75
HMBOX1-212ENST00000558662 KRTAP1-3Q8IUG1 177 aa10.39□□□□□ -0.75
HMBOX1-212ENST00000558662 LINC01558Q9Y6Z2 57 aa10.39□□□□□ -0.75
HMBOX1-212ENST00000558662 TENM4Q6N022 2769 aa10.38□□□□□ -0.75
HMBOX1-212ENST00000558662 Q8NAQ8 132 aa10.38□□□□□ -0.75
HMBOX1-212ENST00000558662 A8MU10 97 aa10.37□□□□□ -0.75
HMBOX1-212ENST00000558662 COA5Q86WW8 74 aa10.37□□□□□ -0.75
HMBOX1-212ENST00000558662 LINC00476Q8WZB0 136 aa10.37□□□□□ -0.75
HMBOX1-212ENST00000558662 SERTAD4-AS1Q5TG53 156 aa10.36□□□□□ -0.75
HMBOX1-212ENST00000558662 CASC2Q6XLA1 102 aa10.36□□□□□ -0.75
HMBOX1-212ENST00000558662 WFDC13Q8IUB5 93 aa10.36□□□□□ -0.75
HMBOX1-212ENST00000558662 PLAC8Q9NZF1 115 aa10.36□□□□□ -0.75
HMBOX1-212ENST00000558662 MYO9AB2RTY4 2548 aa10.35□□□□□ -0.75
HMBOX1-212ENST00000558662 PTPN13Q12923 2485 aa10.34□□□□□ -0.75
HMBOX1-212ENST00000558662 DEFB135Q30KP9 77 aa10.33□□□□□ -0.76
HMBOX1-212ENST00000558662 IGFL1Q6UW32 110 aa10.31□□□□□ -0.76
HMBOX1-212ENST00000558662 WFDC10BQ8IUB3 73 aa10.31□□□□□ -0.76
HMBOX1-212ENST00000558662 SETXQ7Z333 2677 aaKnown RBP10.31□□□□□ -0.76
HMBOX1-212ENST00000558662 CELSR2Q9HCU4 2923 aa10.31□□□□□ -0.76
HMBOX1-212ENST00000558662 ANKRD17O75179 2603 aaKnown RBP10.31□□□□□ -0.76
HMBOX1-212ENST00000558662 A8MWP4 228 aa10.29□□□□□ -0.76
HMBOX1-212ENST00000558662 HTN3P15516 51 aa10.29□□□□□ -0.76
HMBOX1-212ENST00000558662 CNBPP62633 177 aaKnown RBP10.29□□□□□ -0.76
HMBOX1-212ENST00000558662 JMJD1CQ15652 2540 aa10.29□□□□□ -0.76
HMBOX1-212ENST00000558662 MXRA5Q9NR99 2828 aa10.29□□□□□ -0.76
HMBOX1-212ENST00000558662 APCP25054 2843 aa10.29□□□□□ -0.76
HMBOX1-212ENST00000558662 DEFB4AO15263 64 aa10.28□□□□□ -0.76
HMBOX1-212ENST00000558662 LINC01556Q5JQF7 62 aa10.28□□□□□ -0.76
HMBOX1-212ENST00000558662 TP53AIP1Q9HCN2 124 aa10.28□□□□□ -0.76
HMBOX1-212ENST00000558662 HELZ2Q9BYK8 2649 aaKnown RBP10.28□□□□□ -0.76
HMBOX1-212ENST00000558662 VPS13CQ709C8 3753 aa10.27□□□□□ -0.77
HMBOX1-212ENST00000558662 MOBPQ13875 183 aa10.26□□□□□ -0.77
HMBOX1-212ENST00000558662 ASB16-AS1Q495Z4 193 aa10.26□□□□□ -0.77
HMBOX1-212ENST00000558662 POLQO75417 2590 aa10.26□□□□□ -0.77
HMBOX1-212ENST00000558662 A0A087X002 238 aa10.26□□□□□ -0.77
HMBOX1-212ENST00000558662 PRB2P02812 416 aaPredicted RBP10.26□□□□□ -0.77
HMBOX1-212ENST00000558662 A0A087WSZ3 146 aa10.25□□□□□ -0.77
HMBOX1-212ENST00000558662 REG3GQ6UW15 175 aa10.25□□□□□ -0.77
HMBOX1-212ENST00000558662 NAV2Q8IVL1 2488 aa10.25□□□□□ -0.77
HMBOX1-212ENST00000558662 ABCA12Q86UK0 2595 aa10.25□□□□□ -0.77
HMBOX1-212ENST00000558662 CENPEQ02224 2701 aa10.24□□□□□ -0.77
HMBOX1-212ENST00000558662 PDZD2O15018 2839 aa10.23□□□□□ -0.77
HMBOX1-212ENST00000558662 CSMD2Q7Z408 3487 aa10.23□□□□□ -0.77
HMBOX1-212ENST00000558662 FN1P02751 2386 aaKnown RBP10.21□□□□□ -0.78
HMBOX1-212ENST00000558662 DEFB116Q30KQ4 102 aa10.21□□□□□ -0.78
HMBOX1-212ENST00000558662 LINC00472Q9H8W2 130 aa10.19□□□□□ -0.78
HMBOX1-212ENST00000558662 KRTAP1-1Q07627 177 aa10.19□□□□□ -0.78
HMBOX1-212ENST00000558662 UNC79Q9P2D8 2635 aa10.17□□□□□ -0.78
HMBOX1-212ENST00000558662 GCN1Q92616 2671 aaKnown RBP10.17□□□□□ -0.78
HMBOX1-212ENST00000558662 NBPF19A0A087WUL8 3843 aa10.16□□□□□ -0.78
HMBOX1-212ENST00000558662 SPRR1BP22528 89 aa10.16□□□□□ -0.78
HMBOX1-212ENST00000558662 C4orf48Q5BLP8 95 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms