RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 Q96NJ1 140 aa2.44□□□□□ -2.02
ATXN3-248ENST00000558190 LINC01558Q9Y6Z2 57 aa2.44□□□□□ -2.02
ATXN3-248ENST00000558190 SPANXA2-OT1Q8N9U9 137 aa2.44□□□□□ -2.02
ATXN3-248ENST00000558190 IGLV1-50A0A075B6I6 118 aa2.44□□□□□ -2.02
ATXN3-248ENST00000558190 C10orf142B7Z368 130 aa2.44□□□□□ -2.02
ATXN3-248ENST00000558190 DSCR10P59022 87 aa2.44□□□□□ -2.02
ATXN3-248ENST00000558190 C8orf17Q9NRJ1 99 aa2.44□□□□□ -2.02
ATXN3-248ENST00000558190 A0A1W2PNM2 257 aa2.43□□□□□ -2.02
ATXN3-248ENST00000558190 KRTAP10-9P60411 292 aa2.43□□□□□ -2.02
ATXN3-248ENST00000558190 GVQW2A0A096LPI5 108 aaPredicted RBP2.43□□□□□ -2.02
ATXN3-248ENST00000558190 KLK9Q2XQG4 91 aa2.43□□□□□ -2.02
ATXN3-248ENST00000558190 IGFL1Q6UW32 110 aa2.43□□□□□ -2.02
ATXN3-248ENST00000558190 PRO3102Q9H379 93 aa2.43□□□□□ -2.02
ATXN3-248ENST00000558190 A0A1B0GU33 70 aa2.43□□□□□ -2.02
ATXN3-248ENST00000558190 K7EQZ3 153 aa2.43□□□□□ -2.02
ATXN3-248ENST00000558190 RTL8CO15255 209 aa2.43□□□□□ -2.02
ATXN3-248ENST00000558190 Q8NAQ8 132 aa2.43□□□□□ -2.02
ATXN3-248ENST00000558190 A0A0D9SG42 100 aa2.43□□□□□ -2.02
ATXN3-248ENST00000558190 LINC00528Q8N1L1 170 aa2.43□□□□□ -2.02
ATXN3-248ENST00000558190 LTBP2Q14767 1821 aa2.43□□□□□ -2.02
ATXN3-248ENST00000558190 Q6ZRX8 168 aa2.43□□□□□ -2.02
ATXN3-248ENST00000558190 NOTCH4Q99466 2003 aa2.42□□□□□ -2.02
ATXN3-248ENST00000558190 ANKRD11Q6UB99 2663 aaPredicted RBP2.42□□□□□ -2.02
ATXN3-248ENST00000558190 Q5VV11 94 aa2.42□□□□□ -2.02
ATXN3-248ENST00000558190 GIG44P09565 113 aaPredicted RBP2.42□□□□□ -2.02
ATXN3-248ENST00000558190 CENPEQ02224 2701 aa2.41□□□□□ -2.02
ATXN3-248ENST00000558190 C16orf95Q9H693 158 aa2.41□□□□□ -2.02
ATXN3-248ENST00000558190 MRPL34Q9BQ48 92 aaKnown RBP2.41□□□□□ -2.02
ATXN3-248ENST00000558190 SMR3AQ99954 134 aa2.41□□□□□ -2.02
ATXN3-248ENST00000558190 A0A1W2PPR1 153 aa2.41□□□□□ -2.02
ATXN3-248ENST00000558190 HRES1P13985 223 aa2.41□□□□□ -2.02
ATXN3-248ENST00000558190 SPACA4Q8TDM5 124 aa2.4□□□□□ -2.02
ATXN3-248ENST00000558190 ZNF292O60281 2723 aa2.4□□□□□ -2.02
ATXN3-248ENST00000558190 EXPH5Q8NEV8 1989 aa2.4□□□□□ -2.03
ATXN3-248ENST00000558190 A0A096LNT2 108 aa2.4□□□□□ -2.03
ATXN3-248ENST00000558190 CSNK1G2-AS1Q8NCQ2 148 aa2.4□□□□□ -2.03
ATXN3-248ENST00000558190 ATG2AQ2TAZ0 1938 aa2.4□□□□□ -2.03
ATXN3-248ENST00000558190 Q75L30 129 aa2.4□□□□□ -2.03
ATXN3-248ENST00000558190 COL5A1P20908 1838 aaPredicted RBP2.39□□□□□ -2.03
ATXN3-248ENST00000558190 COL4A5P29400 1685 aa2.39□□□□□ -2.03
ATXN3-248ENST00000558190 DNAH12Q6ZR08 3092 aa2.39□□□□□ -2.03
ATXN3-248ENST00000558190 Q8N1X5 172 aa2.39□□□□□ -2.03
ATXN3-248ENST00000558190 PTPRBP23467 1997 aa2.39□□□□□ -2.03
ATXN3-248ENST00000558190 IGLV5-52A0A0A0MRZ9 124 aa2.39□□□□□ -2.03
ATXN3-248ENST00000558190 PRRC2CQ9Y520 2896 aaKnown RBP2.39□□□□□ -2.03
ATXN3-248ENST00000558190 LY6G6CO95867 125 aa2.39□□□□□ -2.03
ATXN3-248ENST00000558190 COL4A3Q01955 1670 aa2.39□□□□□ -2.03
ATXN3-248ENST00000558190 LUZP6Q538Z0 58 aa2.38□□□□□ -2.03
ATXN3-248ENST00000558190 SETXQ7Z333 2677 aaKnown RBP2.38□□□□□ -2.03
ATXN3-248ENST00000558190 A0A1B0GVX0 72 aa2.38□□□□□ -2.03
ATXN3-248ENST00000558190 FAM229AH3BQW9 127 aa2.38□□□□□ -2.03
ATXN3-248ENST00000558190 CPAMD8Q8IZJ3 1885 aa2.38□□□□□ -2.03
ATXN3-248ENST00000558190 INAFM1C9JVW0 142 aa2.37□□□□□ -2.03
ATXN3-248ENST00000558190 IGLV7-43P04211 117 aa2.37□□□□□ -2.03
ATXN3-248ENST00000558190 NSD1Q96L73 2696 aaPredicted RBP2.37□□□□□ -2.03
ATXN3-248ENST00000558190 ITPR3Q14573 2671 aa2.37□□□□□ -2.03
ATXN3-248ENST00000558190 CHTF8P0CG12 524 aa2.37□□□□□ -2.03
ATXN3-248ENST00000558190 RAI1Q7Z5J4 1906 aaPredicted RBP2.37□□□□□ -2.03
ATXN3-248ENST00000558190 PTPRSQ13332 1948 aa2.37□□□□□ -2.03
ATXN3-248ENST00000558190 ADAMTS20P59510 1910 aa2.37□□□□□ -2.03
ATXN3-248ENST00000558190 THSD7BQ9C0I4 1608 aa2.37□□□□□ -2.03
ATXN3-248ENST00000558190 IGLV5-48A0A075B6I7 105 aa2.37□□□□□ -2.03
ATXN3-248ENST00000558190 COL4A1P02462 1669 aa2.36□□□□□ -2.03
ATXN3-248ENST00000558190 KMT2BQ9UMN6 2715 aaPredicted RBP2.36□□□□□ -2.03
ATXN3-248ENST00000558190 SPATA8Q6RVD6 105 aa2.36□□□□□ -2.03
ATXN3-248ENST00000558190 PRR34Q9NV39 138 aa2.35□□□□□ -2.03
ATXN3-248ENST00000558190 A0A0A0MQY5 61 aa2.35□□□□□ -2.03
ATXN3-248ENST00000558190 CELSR2Q9HCU4 2923 aa2.34□□□□□ -2.03
ATXN3-248ENST00000558190 C15orf56Q8N910 161 aa2.34□□□□□ -2.03
ATXN3-248ENST00000558190 PLA2G2DQ9UNK4 145 aa2.34□□□□□ -2.03
ATXN3-248ENST00000558190 H3BNG1 76 aa2.34□□□□□ -2.03
ATXN3-248ENST00000558190 DNAH10OSP0CZ25 163 aa2.34□□□□□ -2.03
ATXN3-248ENST00000558190 IGSF10Q6WRI0 2623 aa2.34□□□□□ -2.03
ATXN3-248ENST00000558190 LRP4O75096 1905 aa2.34□□□□□ -2.03
ATXN3-248ENST00000558190 CASC10Q5T4H9 136 aa2.34□□□□□ -2.04
ATXN3-248ENST00000558190 DMAC1Q96GE9 116 aa2.34□□□□□ -2.04
ATXN3-248ENST00000558190 CNBPP62633 177 aaKnown RBP2.34□□□□□ -2.04
ATXN3-248ENST00000558190 ADM2Q7Z4H4 148 aa2.33□□□□□ -2.04
ATXN3-248ENST00000558190 LINC00472Q9H8W2 130 aa2.33□□□□□ -2.04
ATXN3-248ENST00000558190 ZNF861PO60384 105 aa2.33□□□□□ -2.04
ATXN3-248ENST00000558190 PCNTO95613 3336 aa2.33□□□□□ -2.04
ATXN3-248ENST00000558190 BPTFQ12830 3046 aa2.33□□□□□ -2.04
ATXN3-248ENST00000558190 K7EIL1 84 aa2.33□□□□□ -2.04
ATXN3-248ENST00000558190 TYMSOSQ8TAI1 123 aa2.32□□□□□ -2.04
ATXN3-248ENST00000558190 A8MU10 97 aa2.32□□□□□ -2.04
ATXN3-248ENST00000558190 A6NN06 94 aa2.32□□□□□ -2.04
ATXN3-248ENST00000558190 C19orf73Q9NVV2 129 aa2.32□□□□□ -2.04
ATXN3-248ENST00000558190 Q8NDZ9 215 aa2.32□□□□□ -2.04
ATXN3-248ENST00000558190 ROMO1P60602 79 aa2.31□□□□□ -2.04
ATXN3-248ENST00000558190 CENPFP49454 3210 aa2.31□□□□□ -2.04
ATXN3-248ENST00000558190 NUPR2A6NF83 97 aa2.31□□□□□ -2.04
ATXN3-248ENST00000558190 ASB16-AS1Q495Z4 193 aa2.31□□□□□ -2.04
ATXN3-248ENST00000558190 SPRR4Q96PI1 79 aa2.31□□□□□ -2.04
ATXN3-248ENST00000558190 A0A0C4DFX4 3053 aa2.3□□□□□ -2.04
ATXN3-248ENST00000558190 Q6ZR54 194 aa2.3□□□□□ -2.04
ATXN3-248ENST00000558190 C9orf92A6NGG3 77 aa2.3□□□□□ -2.04
ATXN3-248ENST00000558190 LINC00612Q8N6U2 182 aa2.3□□□□□ -2.04
ATXN3-248ENST00000558190 GCN1Q92616 2671 aaKnown RBP2.3□□□□□ -2.04
ATXN3-248ENST00000558190 COL4A4P53420 1690 aaPredicted RBP2.3□□□□□ -2.04
ATXN3-248ENST00000558190 CEP350Q5VT06 3117 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms