RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 PMAIP1Q13794 54 aa2.96□□□□□ -1.94
SPG11-208ENST00000558155 NRACQ8N912 160 aa2.96□□□□□ -1.94
SPG11-208ENST00000558155 LINC00167Q96N53 147 aa2.96□□□□□ -1.94
SPG11-208ENST00000558155 C20orf78Q9BR46 151 aa2.96□□□□□ -1.94
SPG11-208ENST00000558155 XAGE1AQ9HD64 81 aa2.96□□□□□ -1.94
SPG11-208ENST00000558155 MUC17Q685J3 4493 aa2.95□□□□□ -1.94
SPG11-208ENST00000558155 FAM236DA0A1B0GTK5 79 aa2.95□□□□□ -1.94
SPG11-208ENST00000558155 C9orf118A6NHY6 69 aa2.95□□□□□ -1.94
SPG11-208ENST00000558155 RPL37AP8A6NKH3 93 aa2.95□□□□□ -1.94
SPG11-208ENST00000558155 HIGD1CA8MV81 97 aa2.95□□□□□ -1.94
SPG11-208ENST00000558155 SNCGO76070 127 aa2.95□□□□□ -1.94
SPG11-208ENST00000558155 CFC1BP0CG36 223 aa2.95□□□□□ -1.94
SPG11-208ENST00000558155 FAM236CP0DP71 79 aa2.95□□□□□ -1.94
SPG11-208ENST00000558155 COPS9Q8WXC6 57 aa2.95□□□□□ -1.94
SPG11-208ENST00000558155 FAM104AQ969W3 186 aa2.95□□□□□ -1.94
SPG11-208ENST00000558155 TOMM7Q9P0U1 55 aa2.95□□□□□ -1.94
SPG11-208ENST00000558155 FAM240AA0A1B0GVK7 77 aa2.94□□□□□ -1.94
SPG11-208ENST00000558155 CCDC179H3BU77 68 aa2.94□□□□□ -1.94
SPG11-208ENST00000558155 CKS2P33552 79 aa2.94□□□□□ -1.94
SPG11-208ENST00000558155 IFI27P40305 119 aaPredicted RBP2.94□□□□□ -1.94
SPG11-208ENST00000558155 TMEM258P61165 79 aa2.94□□□□□ -1.94
SPG11-208ENST00000558155 KRTAP13-3Q3SY46 172 aa2.94□□□□□ -1.94
SPG11-208ENST00000558155 MRPL51Q4U2R6 128 aaKnown RBP2.94□□□□□ -1.94
SPG11-208ENST00000558155 C9orf153Q5TBE3 101 aa2.94□□□□□ -1.94
SPG11-208ENST00000558155 FAM104BQ5XKR9 115 aa2.94□□□□□ -1.94
SPG11-208ENST00000558155 HRCT1Q6UXD1 115 aa2.94□□□□□ -1.94
SPG11-208ENST00000558155 KRTAP13-1Q8IUC0 172 aa2.94□□□□□ -1.94
SPG11-208ENST00000558155 KRTAP4-1Q9BYQ7 146 aa2.94□□□□□ -1.94
SPG11-208ENST00000558155 PYGO1Q9Y3Y4 419 aa2.94□□□□□ -1.94
SPG11-208ENST00000558155 SPCS1Q9Y6A9 102 aa2.94□□□□□ -1.94
SPG11-208ENST00000558155 A0A1B0GWB2 263 aa2.93□□□□□ -1.94
SPG11-208ENST00000558155 UQCRQO14949 82 aa2.93□□□□□ -1.94
SPG11-208ENST00000558155 BVES-AS1Q5T3Y7 98 aa2.93□□□□□ -1.94
SPG11-208ENST00000558155 Q8IZM0 81 aa2.93□□□□□ -1.94
SPG11-208ENST00000558155 ANKRD29Q8N6D5 301 aa2.93□□□□□ -1.94
SPG11-208ENST00000558155 NKAPP1Q8N9T2 125 aa2.93□□□□□ -1.94
SPG11-208ENST00000558155 TMEM141Q96I45 108 aa2.93□□□□□ -1.94
SPG11-208ENST00000558155 NAA38Q9BRA0 125 aaKnown RBP2.93□□□□□ -1.94
SPG11-208ENST00000558155 EIF5A2Q9GZV4 153 aaKnown RBP2.93□□□□□ -1.94
SPG11-208ENST00000558155 OSTCQ9NRP0 149 aa2.93□□□□□ -1.94
SPG11-208ENST00000558155 IGLV4-3A0A075B6K6 122 aa2.92□□□□□ -1.94
SPG11-208ENST00000558155 A0A1W2PPM0 123 aa2.92□□□□□ -1.94
SPG11-208ENST00000558155 F8VRH5 84 aa2.92□□□□□ -1.94
SPG11-208ENST00000558155 CXCL5P42830 114 aa2.92□□□□□ -1.94
SPG11-208ENST00000558155 HERVK_113P63121 156 aa2.92□□□□□ -1.94
SPG11-208ENST00000558155 GAGE2AQ6NT46 116 aa2.92□□□□□ -1.94
SPG11-208ENST00000558155 C3orf22Q8N5N4 141 aa2.92□□□□□ -1.94
SPG11-208ENST00000558155 DAND5Q8N907 189 aa2.92□□□□□ -1.94
SPG11-208ENST00000558155 SMIM2Q9BVW6 85 aa2.92□□□□□ -1.94
SPG11-208ENST00000558155 GNB1LQ9BYB4 327 aa2.92□□□□□ -1.94
SPG11-208ENST00000558155 NDUFA12Q9UI09 145 aa2.92□□□□□ -1.94
SPG11-208ENST00000558155 IGLV5-37A0A075B6J1 123 aa2.91□□□□□ -1.94
SPG11-208ENST00000558155 SPINK1P00995 79 aa2.91□□□□□ -1.94
SPG11-208ENST00000558155 PFN2P35080 140 aa2.91□□□□□ -1.94
SPG11-208ENST00000558155 SLC25A34Q6PIV7 304 aa2.91□□□□□ -1.94
SPG11-208ENST00000558155 IGKV2-28A0A075B6P5 120 aa2.9□□□□□ -1.95
SPG11-208ENST00000558155 D6R8Y8 96 aa2.9□□□□□ -1.95
SPG11-208ENST00000558155 H3BMG7 143 aa2.9□□□□□ -1.95
SPG11-208ENST00000558155 J3QQQ9 107 aa2.9□□□□□ -1.95
SPG11-208ENST00000558155 IGKV2D-28P01615 120 aa2.9□□□□□ -1.95
SPG11-208ENST00000558155 TRACP01848 142 aa2.9□□□□□ -1.95
SPG11-208ENST00000558155 MT-ATP8P03928 68 aa2.9□□□□□ -1.95
SPG11-208ENST00000558155 PRLHP81277 87 aa2.9□□□□□ -1.95
SPG11-208ENST00000558155 C2orf66Q6UXQ4 117 aa2.9□□□□□ -1.95
SPG11-208ENST00000558155 FAM19A3Q7Z5A8 133 aa2.9□□□□□ -1.95
SPG11-208ENST00000558155 AMELXQ99217 191 aa2.9□□□□□ -1.95
SPG11-208ENST00000558155 SMIM7Q9BQ49 75 aa2.9□□□□□ -1.95
SPG11-208ENST00000558155 V9GYV3 84 aa2.9□□□□□ -1.95
SPG11-208ENST00000558155 TRBV20-1A0A075B6N2 111 aa2.89□□□□□ -1.95
SPG11-208ENST00000558155 H3BUT2 72 aa2.89□□□□□ -1.95
SPG11-208ENST00000558155 NPYP01303 97 aa2.89□□□□□ -1.95
SPG11-208ENST00000558155 KRTDAPP60985 99 aa2.89□□□□□ -1.95
SPG11-208ENST00000558155 MT1HP80294 61 aa2.89□□□□□ -1.95
SPG11-208ENST00000558155 PAPPA-AS1Q5QFB9 102 aa2.89□□□□□ -1.95
SPG11-208ENST00000558155 SCGB1D4Q6XE38 83 aa2.89□□□□□ -1.95
SPG11-208ENST00000558155 TMEM136Q6ZRR5 245 aa2.89□□□□□ -1.95
SPG11-208ENST00000558155 Q6ZVH6 145 aa2.89□□□□□ -1.95
SPG11-208ENST00000558155 ATOH7Q8N100 152 aa2.89□□□□□ -1.95
SPG11-208ENST00000558155 FAM19A2Q8N3H0 131 aa2.89□□□□□ -1.95
SPG11-208ENST00000558155 Q8NBF4 154 aa2.89□□□□□ -1.95
SPG11-208ENST00000558155 C18orf32Q8TCD1 76 aa2.89□□□□□ -1.95
SPG11-208ENST00000558155 PPDPFLQ8WWR9 84 aa2.89□□□□□ -1.95
SPG11-208ENST00000558155 ZNF706Q9Y5V0 76 aaPredicted RBP2.89□□□□□ -1.95
SPG11-208ENST00000558155 FAM236AA0A1B0GUQ0 79 aa2.88□□□□□ -1.95
SPG11-208ENST00000558155 FAM236BA0A1B0GV22 79 aa2.88□□□□□ -1.95
SPG11-208ENST00000558155 SMIM27A0A1W2PRY6 76 aa2.88□□□□□ -1.95
SPG11-208ENST00000558155 M0R2T5 61 aa2.88□□□□□ -1.95
SPG11-208ENST00000558155 KRTAP10-6P60371 365 aaPredicted RBP2.88□□□□□ -1.95
SPG11-208ENST00000558155 KIAA1644Q3SXP7 199 aa2.88□□□□□ -1.95
SPG11-208ENST00000558155 ZC2HC1BQ5TFG8 222 aa2.88□□□□□ -1.95
SPG11-208ENST00000558155 Q5XG85 94 aa2.88□□□□□ -1.95
SPG11-208ENST00000558155 ORMDL3Q8N138 153 aa2.88□□□□□ -1.95
SPG11-208ENST00000558155 COX7B2Q8TF08 81 aa2.88□□□□□ -1.95
SPG11-208ENST00000558155 SPRR4Q96PI1 79 aa2.88□□□□□ -1.95
SPG11-208ENST00000558155 HIGD2AQ9BW72 106 aa2.88□□□□□ -1.95
SPG11-208ENST00000558155 IMUPQ9GZP8 106 aa2.88□□□□□ -1.95
SPG11-208ENST00000558155 CDKN2A-AS1Q9UH64 79 aa2.88□□□□□ -1.95
SPG11-208ENST00000558155 TRAV9-1A0A075B6T8 112 aa2.87□□□□□ -1.95
SPG11-208ENST00000558155 LOC389332A0A1B0GUA5 103 aa2.87□□□□□ -1.95
SPG11-208ENST00000558155 SYS1-DBNDD2H3BUS1 97 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms