RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 HECTD1Q9ULT8 2610 aa1.22□□□□□ -2.21
TDP1-217ENST00000557782 SETD2Q9BYW2 2564 aaPredicted RBP1.22□□□□□ -2.21
TDP1-217ENST00000557782 ZNF292O60281 2723 aa1.22□□□□□ -2.21
TDP1-217ENST00000557782 A0A087WVE0 104 aa1.22□□□□□ -2.21
TDP1-217ENST00000557782 H0YGG7 62 aa1.22□□□□□ -2.21
TDP1-217ENST00000557782 LEPROTL1O95214 131 aa1.22□□□□□ -2.21
TDP1-217ENST00000557782 DEFB110Q30KQ9 67 aa1.22□□□□□ -2.21
TDP1-217ENST00000557782 HEPN1Q6WQI6 88 aa1.22□□□□□ -2.21
TDP1-217ENST00000557782 DEFB123Q8N688 67 aa1.22□□□□□ -2.21
TDP1-217ENST00000557782 SMCO4Q9NRQ5 59 aa1.22□□□□□ -2.21
TDP1-217ENST00000557782 OBSCNQ5VST9 7968 aa1.22□□□□□ -2.21
TDP1-217ENST00000557782 MKI67P46013 3256 aaKnown RBP1.21□□□□□ -2.21
TDP1-217ENST00000557782 NCOR1O75376 2440 aa1.21□□□□□ -2.22
TDP1-217ENST00000557782 VCANP13611 3396 aa1.21□□□□□ -2.22
TDP1-217ENST00000557782 UMAD1C9J7I0 102 aa1.21□□□□□ -2.22
TDP1-217ENST00000557782 ADIRFQ15847 76 aa1.21□□□□□ -2.22
TDP1-217ENST00000557782 C10orf113Q5VZT2 155 aa1.21□□□□□ -2.22
TDP1-217ENST00000557782 ARHGAP5-AS1Q96IT6 56 aa1.21□□□□□ -2.22
TDP1-217ENST00000557782 PSENENQ9NZ42 101 aa1.21□□□□□ -2.22
TDP1-217ENST00000557782 SPCS1Q9Y6A9 102 aa1.21□□□□□ -2.22
TDP1-217ENST00000557782 RANBP2P49792 3224 aaKnown RBP1.21□□□□□ -2.22
TDP1-217ENST00000557782 DNAJC13O75165 2243 aa1.21□□□□□ -2.22
TDP1-217ENST00000557782 ACACBO00763 2458 aa1.21□□□□□ -2.22
TDP1-217ENST00000557782 USF3Q68DE3 2245 aa1.2□□□□□ -2.22
TDP1-217ENST00000557782 LAMA1P25391 3075 aa1.2□□□□□ -2.22
TDP1-217ENST00000557782 ZFHX4Q86UP3 3567 aa1.2□□□□□ -2.22
TDP1-217ENST00000557782 CACNA1EQ15878 2313 aa1.2□□□□□ -2.22
TDP1-217ENST00000557782 KNL1Q8NG31 2342 aa1.2□□□□□ -2.22
TDP1-217ENST00000557782 A0A087WWC5 75 aa1.2□□□□□ -2.22
TDP1-217ENST00000557782 D6R8Y8 96 aa1.2□□□□□ -2.22
TDP1-217ENST00000557782 NMSQ5H8A3 153 aa1.2□□□□□ -2.22
TDP1-217ENST00000557782 MUSTN1Q8IVN3 82 aa1.2□□□□□ -2.22
TDP1-217ENST00000557782 FDCSPQ8NFU4 85 aa1.2□□□□□ -2.22
TDP1-217ENST00000557782 ST20Q9HBF5 79 aa1.2□□□□□ -2.22
TDP1-217ENST00000557782 CFAP47Q6ZTR5 3102 aa1.2□□□□□ -2.22
TDP1-217ENST00000557782 SPTBN4Q9H254 2564 aa1.2□□□□□ -2.22
TDP1-217ENST00000557782 LAMA3Q16787 3333 aa1.19□□□□□ -2.22
TDP1-217ENST00000557782 TRBV6-1A0A0K0K1D8 114 aa1.19□□□□□ -2.22
TDP1-217ENST00000557782 CEP290O15078 2479 aa1.19□□□□□ -2.22
TDP1-217ENST00000557782 ACYP1P07311 99 aa1.19□□□□□ -2.22
TDP1-217ENST00000557782 C6orf201Q7Z4U5 140 aa1.19□□□□□ -2.22
TDP1-217ENST00000557782 C10orf95Q9H7T3 257 aa1.19□□□□□ -2.22
TDP1-217ENST00000557782 SPTBN5Q9NRC6 3674 aaKnown RBP1.19□□□□□ -2.22
TDP1-217ENST00000557782 MYO9AB2RTY4 2548 aa1.19□□□□□ -2.22
TDP1-217ENST00000557782 TRIOO75962 3097 aa1.19□□□□□ -2.22
TDP1-217ENST00000557782 MUC3AQ02505 3323 aa1.18□□□□□ -2.22
TDP1-217ENST00000557782 CNOT1A5YKK6 2376 aaKnown RBP1.18□□□□□ -2.22
TDP1-217ENST00000557782 A0A0D9SG42 100 aa1.18□□□□□ -2.22
TDP1-217ENST00000557782 SPTY2D1-AS1A0A0U1RR47 76 aa1.18□□□□□ -2.22
TDP1-217ENST00000557782 PRH1P02810 166 aa1.18□□□□□ -2.22
TDP1-217ENST00000557782 KRTAP5-9P26371 169 aa1.18□□□□□ -2.22
TDP1-217ENST00000557782 PIGYQ3MUY2 71 aa1.18□□□□□ -2.22
TDP1-217ENST00000557782 LINC00643Q86TS7 51 aa1.18□□□□□ -2.22
TDP1-217ENST00000557782 GNG13Q9P2W3 67 aa1.18□□□□□ -2.22
TDP1-217ENST00000557782 SPTAN1Q13813 2472 aaKnown RBP1.18□□□□□ -2.22
TDP1-217ENST00000557782 WDR87Q6ZQQ6 2873 aa1.18□□□□□ -2.22
TDP1-217ENST00000557782 HELZ2Q9BYK8 2649 aaKnown RBP1.18□□□□□ -2.22
TDP1-217ENST00000557782 MAP1BP46821 2468 aaKnown RBP1.17□□□□□ -2.22
TDP1-217ENST00000557782 AHCTF1Q8WYP5 2266 aa1.17□□□□□ -2.22
TDP1-217ENST00000557782 XIRP2A4UGR9 3374 aa1.17□□□□□ -2.22
TDP1-217ENST00000557782 CEBPZOSA8MTT3 80 aa1.17□□□□□ -2.22
TDP1-217ENST00000557782 IAPPP10997 89 aa1.17□□□□□ -2.22
TDP1-217ENST00000557782 TFF3Q07654 80 aa1.17□□□□□ -2.22
TDP1-217ENST00000557782 DEFB133Q30KQ1 61 aa1.17□□□□□ -2.22
TDP1-217ENST00000557782 SSBP3-AS1Q7Z2R9 100 aa1.17□□□□□ -2.22
TDP1-217ENST00000557782 LINC01600Q96MT4 127 aa1.17□□□□□ -2.22
TDP1-217ENST00000557782 PTPRZ1P23471 2315 aaPredicted RBP1.17□□□□□ -2.22
TDP1-217ENST00000557782 CDH23Q9H251 3354 aa1.17□□□□□ -2.22
TDP1-217ENST00000557782 CFAP54Q96N23 3096 aa1.17□□□□□ -2.22
TDP1-217ENST00000557782 TNCP24821 2201 aa1.16□□□□□ -2.22
TDP1-217ENST00000557782 SPG11Q96JI7 2443 aa1.16□□□□□ -2.22
TDP1-217ENST00000557782 DNAH14Q0VDD8 3507 aa1.16□□□□□ -2.22
TDP1-217ENST00000557782 H0Y9P7 68 aa1.16□□□□□ -2.22
TDP1-217ENST00000557782 SERF2P84101 59 aa1.16□□□□□ -2.22
TDP1-217ENST00000557782 WFDC2Q14508 124 aa1.16□□□□□ -2.22
TDP1-217ENST00000557782 SPATA8Q6RVD6 105 aa1.16□□□□□ -2.22
TDP1-217ENST00000557782 PCNX1Q96RV3 2341 aa1.16□□□□□ -2.22
TDP1-217ENST00000557782 FRYLO94915 3013 aa1.15□□□□□ -2.22
TDP1-217ENST00000557782 ZFHX3Q15911 3703 aa1.15□□□□□ -2.22
TDP1-217ENST00000557782 KALRNO60229 2985 aa1.15□□□□□ -2.22
TDP1-217ENST00000557782 USP34Q70CQ2 3546 aa1.15□□□□□ -2.23
TDP1-217ENST00000557782 IGLC2P0DOY2 106 aa1.15□□□□□ -2.23
TDP1-217ENST00000557782 IGLC3P0DOY3 106 aa1.15□□□□□ -2.23
TDP1-217ENST00000557782 PRO3102Q9H379 93 aa1.15□□□□□ -2.23
TDP1-217ENST00000557782 U3KQA8 63 aa1.15□□□□□ -2.23
TDP1-217ENST00000557782 PRUNE2Q8WUY3 3088 aa1.15□□□□□ -2.23
TDP1-217ENST00000557782 CEP250Q9BV73 2442 aa1.15□□□□□ -2.23
TDP1-217ENST00000557782 FRYQ5TBA9 3013 aa1.14□□□□□ -2.23
TDP1-217ENST00000557782 JMJD1CQ15652 2540 aa1.14□□□□□ -2.23
TDP1-217ENST00000557782 SPTA1P02549 2419 aa1.14□□□□□ -2.23
TDP1-217ENST00000557782 CREBBPQ92793 2442 aa1.14□□□□□ -2.23
TDP1-217ENST00000557782 SPEGQ15772 3267 aa1.14□□□□□ -2.23
TDP1-217ENST00000557782 MYMXA0A1B0GTQ4 84 aa1.14□□□□□ -2.23
TDP1-217ENST00000557782 IQCF6A8MYZ5 107 aa1.14□□□□□ -2.23
TDP1-217ENST00000557782 C3orf79P0CE67 100 aa1.14□□□□□ -2.23
TDP1-217ENST00000557782 C18orf32Q8TCD1 76 aa1.14□□□□□ -2.23
TDP1-217ENST00000557782 NOTCH1P46531 2555 aa1.14□□□□□ -2.23
TDP1-217ENST00000557782 CCDC168Q8NDH2 2452 aa1.14□□□□□ -2.23
TDP1-217ENST00000557782 DSPP15924 2871 aaKnown RBP1.14□□□□□ -2.23
TDP1-217ENST00000557782 PLCE1Q9P212 2302 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms