RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 LINC00846Q9NV44 126 aa3.17□□□□□ -1.9
ATXN3-246ENST00000557030 IGKV3D-7A0A0C4DH55 119 aa3.16□□□□□ -1.9
ATXN3-246ENST00000557030 LINC00959A0A1B0GUT2 108 aa3.16□□□□□ -1.9
ATXN3-246ENST00000557030 SMIM9A6NGZ8 99 aa3.16□□□□□ -1.9
ATXN3-246ENST00000557030 PFN2P35080 140 aa3.16□□□□□ -1.9
ATXN3-246ENST00000557030 UPK3BQ9BT76 320 aa3.16□□□□□ -1.9
ATXN3-246ENST00000557030 UBL5Q9BZL1 73 aa3.16□□□□□ -1.9
ATXN3-246ENST00000557030 ANK2Q01484 3957 aa3.16□□□□□ -1.9
ATXN3-246ENST00000557030 FLNAP21333 2647 aaKnown RBP3.16□□□□□ -1.9
ATXN3-246ENST00000557030 UBR4Q5T4S7 5183 aa3.15□□□□□ -1.9
ATXN3-246ENST00000557030 NSD1Q96L73 2696 aaPredicted RBP3.15□□□□□ -1.91
ATXN3-246ENST00000557030 NCR3O14931 201 aa3.15□□□□□ -1.91
ATXN3-246ENST00000557030 PDE6GP18545 87 aa3.15□□□□□ -1.91
ATXN3-246ENST00000557030 LYPD5Q6UWN5 251 aa3.15□□□□□ -1.91
ATXN3-246ENST00000557030 FAM19A5Q7Z5A7 132 aaPredicted RBP3.15□□□□□ -1.91
ATXN3-246ENST00000557030 Q8N814 137 aa3.15□□□□□ -1.91
ATXN3-246ENST00000557030 DPH3Q96FX2 82 aa3.15□□□□□ -1.91
ATXN3-246ENST00000557030 NOTCH1P46531 2555 aa3.14□□□□□ -1.91
ATXN3-246ENST00000557030 IGLV4-60A0A075B6I1 120 aa3.14□□□□□ -1.91
ATXN3-246ENST00000557030 IGKV3OR2-268A0A0C4DH90 116 aa3.14□□□□□ -1.91
ATXN3-246ENST00000557030 PLAC8L1A1L4L8 177 aa3.14□□□□□ -1.91
ATXN3-246ENST00000557030 KIR2DL5BQ8NHK3 375 aa3.14□□□□□ -1.91
ATXN3-246ENST00000557030 C16orf95Q9H693 158 aa3.14□□□□□ -1.91
ATXN3-246ENST00000557030 TRAV7A0A075B6U4 112 aa3.13□□□□□ -1.91
ATXN3-246ENST00000557030 A0A087WVE0 104 aa3.13□□□□□ -1.91
ATXN3-246ENST00000557030 LOC110117498A0A087WWA1 95 aa3.13□□□□□ -1.91
ATXN3-246ENST00000557030 LOC100131303A0A0U1RQF7 123 aa3.13□□□□□ -1.91
ATXN3-246ENST00000557030 LOC107984640A0A0U1RRK4 108 aa3.13□□□□□ -1.91
ATXN3-246ENST00000557030 C9orf129Q5T035 196 aaKnown RBP3.13□□□□□ -1.91
ATXN3-246ENST00000557030 LINC01006Q8NI28 216 aa3.13□□□□□ -1.91
ATXN3-246ENST00000557030 A8MU10 97 aa3.12□□□□□ -1.91
ATXN3-246ENST00000557030 IGLV1-51P01701 117 aa3.12□□□□□ -1.91
ATXN3-246ENST00000557030 GIG44P09565 113 aaPredicted RBP3.12□□□□□ -1.91
ATXN3-246ENST00000557030 DNAH10OSP0CZ25 163 aa3.12□□□□□ -1.91
ATXN3-246ENST00000557030 XCL1P47992 114 aa3.12□□□□□ -1.91
ATXN3-246ENST00000557030 ATP5EP56381 51 aaPredicted RBP3.12□□□□□ -1.91
ATXN3-246ENST00000557030 RBM3P98179 157 aaKnown RBP3.12□□□□□ -1.91
ATXN3-246ENST00000557030 LINC00575Q6W349 94 aa3.12□□□□□ -1.91
ATXN3-246ENST00000557030 C6orf223Q8N319 242 aa3.12□□□□□ -1.91
ATXN3-246ENST00000557030 DHRS4-AS1Q9P1J3 65 aa3.12□□□□□ -1.91
ATXN3-246ENST00000557030 SORL1Q92673 2214 aa3.12□□□□□ -1.91
ATXN3-246ENST00000557030 NACAE9PAV3 2078 aa3.12□□□□□ -1.91
ATXN3-246ENST00000557030 PKD1L1Q8TDX9 2849 aa3.11□□□□□ -1.91
ATXN3-246ENST00000557030 FAM236DA0A1B0GTK5 79 aa3.11□□□□□ -1.91
ATXN3-246ENST00000557030 LYRM9A8MSI8 78 aa3.11□□□□□ -1.91
ATXN3-246ENST00000557030 NDUFC1O43677 76 aa3.11□□□□□ -1.91
ATXN3-246ENST00000557030 FAM236CP0DP71 79 aa3.11□□□□□ -1.91
ATXN3-246ENST00000557030 KRTAP12-2P59991 146 aa3.11□□□□□ -1.91
ATXN3-246ENST00000557030 CXCL6P80162 114 aa3.11□□□□□ -1.91
ATXN3-246ENST00000557030 ENHOQ6UWT2 76 aa3.11□□□□□ -1.91
ATXN3-246ENST00000557030 Q6ZQT0 140 aa3.11□□□□□ -1.91
ATXN3-246ENST00000557030 DSCR8Q96T75 97 aa3.11□□□□□ -1.91
ATXN3-246ENST00000557030 C11orf68Q9H3H3 251 aaKnown RBP3.11□□□□□ -1.91
ATXN3-246ENST00000557030 PRO0255Q9UI72 69 aa3.11□□□□□ -1.91
ATXN3-246ENST00000557030 SERP1Q9Y6X1 66 aa3.11□□□□□ -1.91
ATXN3-246ENST00000557030 TRAV23DV6A0A075B6W5 121 aa3.1□□□□□ -1.91
ATXN3-246ENST00000557030 TRBV7-6A0A0J9YX20 115 aa3.1□□□□□ -1.91
ATXN3-246ENST00000557030 KLKP1Q107X0 134 aa3.1□□□□□ -1.91
ATXN3-246ENST00000557030 KIAA0087Q14695 138 aa3.1□□□□□ -1.91
ATXN3-246ENST00000557030 C6orf99Q4VX62 202 aa3.1□□□□□ -1.91
ATXN3-246ENST00000557030 C20orf197Q8N268 126 aa3.1□□□□□ -1.91
ATXN3-246ENST00000557030 CHCHD10Q8WYQ3 142 aaPredicted RBP3.1□□□□□ -1.91
ATXN3-246ENST00000557030 CYSTM1Q9H1C7 97 aa3.1□□□□□ -1.91
ATXN3-246ENST00000557030 LAMTOR3Q9UHA4 124 aa3.1□□□□□ -1.91
ATXN3-246ENST00000557030 DEFB130BP0DP73 79 aa3.09□□□□□ -1.91
ATXN3-246ENST00000557030 DEFB130AP0DP74 79 aa3.09□□□□□ -1.91
ATXN3-246ENST00000557030 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.09□□□□□ -1.91
ATXN3-246ENST00000557030 FAM19A1Q7Z5A9 133 aa3.09□□□□□ -1.91
ATXN3-246ENST00000557030 MRAPQ8TCY5 172 aa3.09□□□□□ -1.91
ATXN3-246ENST00000557030 DIRC1Q969H9 104 aa3.09□□□□□ -1.91
ATXN3-246ENST00000557030 WFDC10AQ9H1F0 79 aa3.09□□□□□ -1.91
ATXN3-246ENST00000557030 MEGF8Q7Z7M0 2845 aa3.09□□□□□ -1.92
ATXN3-246ENST00000557030 SONP18583 2426 aaKnown RBP3.08□□□□□ -1.92
ATXN3-246ENST00000557030 GVQW2A0A096LPI5 108 aaPredicted RBP3.08□□□□□ -1.92
ATXN3-246ENST00000557030 ERC2-IT1O76042 136 aa3.08□□□□□ -1.92
ATXN3-246ENST00000557030 IGLV6-57P01721 117 aa3.08□□□□□ -1.92
ATXN3-246ENST00000557030 ANGP03950 147 aaKnown RBP3.08□□□□□ -1.92
ATXN3-246ENST00000557030 HAMPP81172 84 aa3.08□□□□□ -1.92
ATXN3-246ENST00000557030 REG3AQ06141 175 aa3.08□□□□□ -1.92
ATXN3-246ENST00000557030 SPAG11BQ08648 103 aa3.08□□□□□ -1.92
ATXN3-246ENST00000557030 LINC00269Q8N2A0 174 aa3.08□□□□□ -1.92
ATXN3-246ENST00000557030 OBSCNQ5VST9 7968 aa3.08□□□□□ -1.92
ATXN3-246ENST00000557030 TLN2Q9Y4G6 2542 aa3.08□□□□□ -1.92
ATXN3-246ENST00000557030 RYR3Q15413 4870 aa3.07□□□□□ -1.92
ATXN3-246ENST00000557030 BIRC6Q9NR09 4857 aa3.07□□□□□ -1.92
ATXN3-246ENST00000557030 SMIM26A0A096LP01 95 aa3.07□□□□□ -1.92
ATXN3-246ENST00000557030 H7BZZ5 65 aa3.07□□□□□ -1.92
ATXN3-246ENST00000557030 OXTP01178 125 aa3.07□□□□□ -1.92
ATXN3-246ENST00000557030 COX7BP24311 80 aa3.07□□□□□ -1.92
ATXN3-246ENST00000557030 PRR3P79522 188 aaKnown RBP3.07□□□□□ -1.92
ATXN3-246ENST00000557030 Q5XG85 94 aa3.07□□□□□ -1.92
ATXN3-246ENST00000557030 CLPSL2Q6UWE3 100 aa3.07□□□□□ -1.92
ATXN3-246ENST00000557030 Q6ZQY7 126 aa3.07□□□□□ -1.92
ATXN3-246ENST00000557030 WFDC9Q8NEX5 89 aa3.07□□□□□ -1.92
ATXN3-246ENST00000557030 TRBV7-4A0A0J9YYF1 115 aa3.06□□□□□ -1.92
ATXN3-246ENST00000557030 A0A1B0GW54 56 aa3.06□□□□□ -1.92
ATXN3-246ENST00000557030 ELOF1P60002 83 aaKnown RBP3.06□□□□□ -1.92
ATXN3-246ENST00000557030 DAD1P61803 113 aa3.06□□□□□ -1.92
ATXN3-246ENST00000557030 LELP1Q5T871 98 aa3.06□□□□□ -1.92
ATXN3-246ENST00000557030 PRKDCP78527 4128 aaKnown RBP3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 220.9 ms