RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 TRBV20-1A0A075B6N2 111 aa8.67□□□□□ -1.02
SLIRP-207ENST00000556831 IGLV7-43P04211 117 aa8.67□□□□□ -1.02
SLIRP-207ENST00000556831 LINC00158P58513 81 aa8.67□□□□□ -1.02
SLIRP-207ENST00000556831 RPL24P83731 157 aaKnown RBP8.67□□□□□ -1.02
SLIRP-207ENST00000556831 KRTAP7-1Q8IUC3 87 aa8.67□□□□□ -1.02
SLIRP-207ENST00000556831 COPS9Q8WXC6 57 aa8.67□□□□□ -1.02
SLIRP-207ENST00000556831 DIRC1Q969H9 104 aa8.67□□□□□ -1.02
SLIRP-207ENST00000556831 HERV-K104P63124 156 aa8.66□□□□□ -1.02
SLIRP-207ENST00000556831 KRTAP11-1Q8IUC1 163 aa8.65□□□□□ -1.02
SLIRP-207ENST00000556831 SND1-IT1Q9HBX3 110 aa8.65□□□□□ -1.02
SLIRP-207ENST00000556831 NDUFA12Q9UI09 145 aa8.64□□□□□ -1.03
SLIRP-207ENST00000556831 IGLV5-37A0A075B6J1 123 aa8.63□□□□□ -1.03
SLIRP-207ENST00000556831 A0A0U1RRA0 63 aa8.63□□□□□ -1.03
SLIRP-207ENST00000556831 K7ERJ3 54 aa8.63□□□□□ -1.03
SLIRP-207ENST00000556831 MT1HL1P0DM35 61 aa8.63□□□□□ -1.03
SLIRP-207ENST00000556831 FAT4Q6V0I7 4981 aa8.62□□□□□ -1.03
SLIRP-207ENST00000556831 A0A0B4J2C4 111 aa8.62□□□□□ -1.03
SLIRP-207ENST00000556831 RPL37AP8A6NKH3 93 aa8.62□□□□□ -1.03
SLIRP-207ENST00000556831 LINC01600Q96MT4 127 aa8.62□□□□□ -1.03
SLIRP-207ENST00000556831 LINC00167Q96N53 147 aa8.62□□□□□ -1.03
SLIRP-207ENST00000556831 H0Y9J4 135 aa8.61□□□□□ -1.03
SLIRP-207ENST00000556831 TIMM17BO60830 172 aa8.61□□□□□ -1.03
SLIRP-207ENST00000556831 A0A0J9YXY3 114 aa8.6□□□□□ -1.03
SLIRP-207ENST00000556831 IFITM1P13164 125 aa8.6□□□□□ -1.03
SLIRP-207ENST00000556831 RPL28P46779 137 aaKnown RBP8.6□□□□□ -1.03
SLIRP-207ENST00000556831 NAA38Q9BRA0 125 aaKnown RBP8.6□□□□□ -1.03
SLIRP-207ENST00000556831 PRO1854Q9UHT4 67 aa8.6□□□□□ -1.03
SLIRP-207ENST00000556831 IGKV2-28A0A075B6P5 120 aa8.59□□□□□ -1.03
SLIRP-207ENST00000556831 BCE1O60756 84 aa8.59□□□□□ -1.03
SLIRP-207ENST00000556831 IGKV2D-28P01615 120 aa8.59□□□□□ -1.03
SLIRP-207ENST00000556831 PCP4P48539 62 aa8.59□□□□□ -1.03
SLIRP-207ENST00000556831 ZNF861PO60384 105 aa8.58□□□□□ -1.04
SLIRP-207ENST00000556831 VPREB1P12018 145 aa8.58□□□□□ -1.04
SLIRP-207ENST00000556831 UBE2AP49459 152 aa8.58□□□□□ -1.04
SLIRP-207ENST00000556831 MIR7-3HGQ8N6C7 128 aa8.58□□□□□ -1.04
SLIRP-207ENST00000556831 SPANXDQ9BXN6 97 aa8.58□□□□□ -1.04
SLIRP-207ENST00000556831 SPANXCQ9NY87 97 aa8.58□□□□□ -1.04
SLIRP-207ENST00000556831 LRP2P98164 4655 aa8.57□□□□□ -1.04
SLIRP-207ENST00000556831 H3BMG7 143 aa8.57□□□□□ -1.04
SLIRP-207ENST00000556831 LOC107984156A0A0G2JMH3 177 aa8.56□□□□□ -1.04
SLIRP-207ENST00000556831 TSPAN13O95857 204 aa8.56□□□□□ -1.04
SLIRP-207ENST00000556831 COX6CP09669 75 aa8.56□□□□□ -1.04
SLIRP-207ENST00000556831 TSPEAR-AS2P59090 65 aa8.56□□□□□ -1.04
SLIRP-207ENST00000556831 ARL17AQ8IVW1 177 aa8.56□□□□□ -1.04
SLIRP-207ENST00000556831 SCGB1C2P0DMR2 95 aa8.55□□□□□ -1.04
SLIRP-207ENST00000556831 SCGB1A1P11684 91 aa8.55□□□□□ -1.04
SLIRP-207ENST00000556831 PPDPFQ9H3Y8 114 aa8.55□□□□□ -1.04
SLIRP-207ENST00000556831 M0R378 163 aa8.54□□□□□ -1.04
SLIRP-207ENST00000556831 CFC1BP0CG36 223 aa8.54□□□□□ -1.04
SLIRP-207ENST00000556831 CFC1P0CG37 223 aa8.54□□□□□ -1.04
SLIRP-207ENST00000556831 IGLV1-50A0A075B6I6 118 aa8.53□□□□□ -1.04
SLIRP-207ENST00000556831 PSMB2P49721 201 aa8.53□□□□□ -1.04
SLIRP-207ENST00000556831 A4D1N5 150 aa8.52□□□□□ -1.05
SLIRP-207ENST00000556831 NCR3O14931 201 aa8.52□□□□□ -1.05
SLIRP-207ENST00000556831 RPL13AP40429 203 aaKnown RBP8.52□□□□□ -1.05
SLIRP-207ENST00000556831 ATXN8Q156A1 80 aa8.52□□□□□ -1.05
SLIRP-207ENST00000556831 Q1RN00 199 aa8.52□□□□□ -1.05
SLIRP-207ENST00000556831 FAM19A1Q7Z5A9 133 aa8.52□□□□□ -1.05
SLIRP-207ENST00000556831 TMEM126AQ9H061 195 aa8.52□□□□□ -1.05
SLIRP-207ENST00000556831 DAND5Q8N907 189 aa8.51□□□□□ -1.05
SLIRP-207ENST00000556831 PPDPFLQ8WWR9 84 aa8.51□□□□□ -1.05
SLIRP-207ENST00000556831 PRO0461Q9UI25 63 aa8.51□□□□□ -1.05
SLIRP-207ENST00000556831 KRTAP10-8P60410 259 aa8.5□□□□□ -1.05
SLIRP-207ENST00000556831 MUSTN1Q8IVN3 82 aa8.5□□□□□ -1.05
SLIRP-207ENST00000556831 TEN1Q86WV5 123 aa8.49□□□□□ -1.05
SLIRP-207ENST00000556831 PRR26Q8N8Z3 221 aa8.49□□□□□ -1.05
SLIRP-207ENST00000556831 Q8NDZ9 215 aa8.49□□□□□ -1.05
SLIRP-207ENST00000556831 SIGMAR1Q99720 223 aa8.49□□□□□ -1.05
SLIRP-207ENST00000556831 PRYO14603 147 aa8.48□□□□□ -1.05
SLIRP-207ENST00000556831 PRLHP81277 87 aa8.48□□□□□ -1.05
SLIRP-207ENST00000556831 ETDBQ3ZM63 59 aa8.48□□□□□ -1.05
SLIRP-207ENST00000556831 NPC2P61916 151 aa8.46□□□□□ -1.06
SLIRP-207ENST00000556831 S100A7L2Q5SY68 101 aa8.46□□□□□ -1.06
SLIRP-207ENST00000556831 LITAFQ99732 161 aa8.46□□□□□ -1.06
SLIRP-207ENST00000556831 ETDCA0A1B0GVM5 59 aa8.45□□□□□ -1.06
SLIRP-207ENST00000556831 TCL1BO95988 128 aa8.45□□□□□ -1.06
SLIRP-207ENST00000556831 KRTAP1-4P0C5Y4 121 aa8.45□□□□□ -1.06
SLIRP-207ENST00000556831 HIGD2AQ9BW72 106 aa8.45□□□□□ -1.06
SLIRP-207ENST00000556831 TRBV10-3A0A0K0K1G6 114 aa8.44□□□□□ -1.06
SLIRP-207ENST00000556831 TRBV10-2A0A0K0K1G8 114 aa8.44□□□□□ -1.06
SLIRP-207ENST00000556831 H3BT86 120 aa8.44□□□□□ -1.06
SLIRP-207ENST00000556831 NDUFC2O95298 119 aa8.44□□□□□ -1.06
SLIRP-207ENST00000556831 CRYGAP11844 174 aa8.44□□□□□ -1.06
SLIRP-207ENST00000556831 KRTAP13-1Q8IUC0 172 aa8.44□□□□□ -1.06
SLIRP-207ENST00000556831 SLC25A20O43772 301 aa8.43□□□□□ -1.06
SLIRP-207ENST00000556831 MTURNQ8N3F0 131 aa8.42□□□□□ -1.06
SLIRP-207ENST00000556831 LINC00337Q8N6G1 96 aa8.42□□□□□ -1.06
SLIRP-207ENST00000556831 KCNQ1DNQ9H478 68 aa8.42□□□□□ -1.06
SLIRP-207ENST00000556831 ZNF706Q9Y5V0 76 aaPredicted RBP8.42□□□□□ -1.06
SLIRP-207ENST00000556831 ADAMTSL4-AS1Q5T5F5 129 aa8.41□□□□□ -1.06
SLIRP-207ENST00000556831 ANKRD29Q8N6D5 301 aa8.41□□□□□ -1.06
SLIRP-207ENST00000556831 C9JAW5 83 aa8.4□□□□□ -1.06
SLIRP-207ENST00000556831 TYMSOSQ8TAI1 123 aa8.4□□□□□ -1.06
SLIRP-207ENST00000556831 TRAV13-2A0A0B4J235 113 aa8.39□□□□□ -1.07
SLIRP-207ENST00000556831 H7C2G1 150 aa8.39□□□□□ -1.07
SLIRP-207ENST00000556831 FAM229BQ4G0N7 80 aa8.39□□□□□ -1.07
SLIRP-207ENST00000556831 LINC00308Q8TCZ7 52 aa8.39□□□□□ -1.07
SLIRP-207ENST00000556831 TRAV23DV6A0A075B6W5 121 aa8.38□□□□□ -1.07
SLIRP-207ENST00000556831 TRIAP1O43715 76 aa8.38□□□□□ -1.07
SLIRP-207ENST00000556831 C21orf62-AS1Q17RA5 79 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms