RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 M0R2N4 97 aa1.97□□□□□ -2.09
PRPF39-210ENST00000556718 LYNX1P0DP58 116 aa1.97□□□□□ -2.09
PRPF39-210ENST00000556718 DEFB132Q7Z7B7 95 aa1.97□□□□□ -2.09
PRPF39-210ENST00000556718 ARHGAP32A7KAX9 2087 aa1.97□□□□□ -2.09
PRPF39-210ENST00000556718 MUC4Q99102 2169 aa1.96□□□□□ -2.1
PRPF39-210ENST00000556718 C1orf137Q5JT78 98 aa1.96□□□□□ -2.1
PRPF39-210ENST00000556718 SPRR4Q96PI1 79 aa1.96□□□□□ -2.1
PRPF39-210ENST00000556718 ASCC3Q8N3C0 2202 aaKnown RBP1.96□□□□□ -2.1
PRPF39-210ENST00000556718 MALRD1Q5VYJ5 2156 aa1.96□□□□□ -2.1
PRPF39-210ENST00000556718 PDE4DIPQ5VU43 2346 aa1.96□□□□□ -2.1
PRPF39-210ENST00000556718 DEFB131BA0A096LNP1 70 aa1.95□□□□□ -2.1
PRPF39-210ENST00000556718 H3BUX3 64 aa1.95□□□□□ -2.1
PRPF39-210ENST00000556718 UQCR11O14957 56 aa1.95□□□□□ -2.1
PRPF39-210ENST00000556718 ACYP2P14621 99 aa1.95□□□□□ -2.1
PRPF39-210ENST00000556718 DEFB109BQ30KR1 87 aa1.95□□□□□ -2.1
PRPF39-210ENST00000556718 C9orf163Q8N9P6 203 aa1.95□□□□□ -2.1
PRPF39-210ENST00000556718 DEFB105AQ8NG35 78 aa1.95□□□□□ -2.1
PRPF39-210ENST00000556718 PLAC8Q9NZF1 115 aa1.95□□□□□ -2.1
PRPF39-210ENST00000556718 WDR87Q6ZQQ6 2873 aa1.94□□□□□ -2.1
PRPF39-210ENST00000556718 A0A1B0GU69 56 aa1.94□□□□□ -2.1
PRPF39-210ENST00000556718 SPINK7P58062 85 aa1.94□□□□□ -2.1
PRPF39-210ENST00000556718 C1orf134Q5TEV5 83 aa1.94□□□□□ -2.1
PRPF39-210ENST00000556718 SPATA8Q6RVD6 105 aa1.94□□□□□ -2.1
PRPF39-210ENST00000556718 WFDC10BQ8IUB3 73 aa1.94□□□□□ -2.1
PRPF39-210ENST00000556718 WFDC13Q8IUB5 93 aa1.94□□□□□ -2.1
PRPF39-210ENST00000556718 NOP10Q9NPE3 64 aaKnown RBP1.94□□□□□ -2.1
PRPF39-210ENST00000556718 CNTRLQ7Z7A1 2325 aa1.94□□□□□ -2.1
PRPF39-210ENST00000556718 K7EQZ3 153 aa1.93□□□□□ -2.1
PRPF39-210ENST00000556718 ANGP03950 147 aaKnown RBP1.93□□□□□ -2.1
PRPF39-210ENST00000556718 MIR22HGQ0VDD5 57 aa1.93□□□□□ -2.1
PRPF39-210ENST00000556718 UNQ6190/PRO20217Q6UXQ8 127 aa1.93□□□□□ -2.1
PRPF39-210ENST00000556718 MED13Q9UHV7 2174 aa1.92□□□□□ -2.1
PRPF39-210ENST00000556718 IGLV1-51P01701 117 aa1.92□□□□□ -2.1
PRPF39-210ENST00000556718 CSAG1Q6PB30 78 aa1.92□□□□□ -2.1
PRPF39-210ENST00000556718 Q8NDZ9 215 aa1.92□□□□□ -2.1
PRPF39-210ENST00000556718 CRCT1Q9UGL9 99 aa1.92□□□□□ -2.1
PRPF39-210ENST00000556718 PRO0255Q9UI72 69 aa1.92□□□□□ -2.1
PRPF39-210ENST00000556718 F5P12259 2224 aa1.92□□□□□ -2.1
PRPF39-210ENST00000556718 BRWD1Q9NSI6 2320 aa1.91□□□□□ -2.1
PRPF39-210ENST00000556718 ROMO1P60602 79 aa1.91□□□□□ -2.1
PRPF39-210ENST00000556718 DNAH12Q6ZR08 3092 aa1.91□□□□□ -2.1
PRPF39-210ENST00000556718 PCOTHQ58A44 107 aa1.9□□□□□ -2.11
PRPF39-210ENST00000556718 Q6ZRX8 168 aa1.9□□□□□ -2.11
PRPF39-210ENST00000556718 ASXL3Q9C0F0 2248 aa1.9□□□□□ -2.11
PRPF39-210ENST00000556718 B4DSR2 109 aa1.89□□□□□ -2.11
PRPF39-210ENST00000556718 DEFB130BP0DP73 79 aa1.89□□□□□ -2.11
PRPF39-210ENST00000556718 DEFB130AP0DP74 79 aa1.89□□□□□ -2.11
PRPF39-210ENST00000556718 TPRXLQ17RH7 258 aa1.89□□□□□ -2.11
PRPF39-210ENST00000556718 CLPSL2Q6UWE3 100 aa1.89□□□□□ -2.11
PRPF39-210ENST00000556718 C4orf3Q8WVX3 66 aa1.89□□□□□ -2.11
PRPF39-210ENST00000556718 DMAC1Q96GE9 116 aa1.89□□□□□ -2.11
PRPF39-210ENST00000556718 C6orf48Q9UBA6 75 aa1.89□□□□□ -2.11
PRPF39-210ENST00000556718 ABCA1O95477 2261 aa1.89□□□□□ -2.11
PRPF39-210ENST00000556718 LELP1Q5T871 98 aa1.88□□□□□ -2.11
PRPF39-210ENST00000556718 KRTAP4-1Q9BYQ7 146 aa1.88□□□□□ -2.11
PRPF39-210ENST00000556718 DNAJC13O75165 2243 aa1.88□□□□□ -2.11
PRPF39-210ENST00000556718 KNL1Q8NG31 2342 aa1.88□□□□□ -2.11
PRPF39-210ENST00000556718 CADP27708 2225 aa1.87□□□□□ -2.11
PRPF39-210ENST00000556718 A0A087WSZ3 146 aa1.87□□□□□ -2.11
PRPF39-210ENST00000556718 KRTAP13-1Q8IUC0 172 aa1.87□□□□□ -2.11
PRPF39-210ENST00000556718 KIAA0100Q14667 2235 aaKnown RBP1.86□□□□□ -2.11
PRPF39-210ENST00000556718 WNK2Q9Y3S1 2297 aa1.86□□□□□ -2.11
PRPF39-210ENST00000556718 CACNA1GO43497 2377 aa1.85□□□□□ -2.11
PRPF39-210ENST00000556718 PCNTO95613 3336 aa1.85□□□□□ -2.11
PRPF39-210ENST00000556718 SPRR1AP35321 89 aa1.85□□□□□ -2.11
PRPF39-210ENST00000556718 RPL37AP61513 92 aaKnown RBP1.85□□□□□ -2.11
PRPF39-210ENST00000556718 SPACA4Q8TDM5 124 aa1.85□□□□□ -2.11
PRPF39-210ENST00000556718 LINC00472Q9H8W2 130 aa1.85□□□□□ -2.11
PRPF39-210ENST00000556718 ABCA4P78363 2273 aa1.84□□□□□ -2.11
PRPF39-210ENST00000556718 PLCE1Q9P212 2302 aa1.84□□□□□ -2.11
PRPF39-210ENST00000556718 PTPRQQ9UMZ3 2332 aa1.84□□□□□ -2.11
PRPF39-210ENST00000556718 A0A096LPF7 62 aa1.84□□□□□ -2.11
PRPF39-210ENST00000556718 MMP24-AS1A0A0U1RRL7 71 aa1.84□□□□□ -2.11
PRPF39-210ENST00000556718 SPART-AS1P0CW21 52 aa1.84□□□□□ -2.11
PRPF39-210ENST00000556718 KRTAP6-3Q3LI67 103 aa1.84□□□□□ -2.11
PRPF39-210ENST00000556718 MRPL34Q9BQ48 92 aaKnown RBP1.84□□□□□ -2.11
PRPF39-210ENST00000556718 PRO3102Q9H379 93 aa1.84□□□□□ -2.11
PRPF39-210ENST00000556718 TNRC18O15417 2968 aaPredicted RBP1.84□□□□□ -2.12
PRPF39-210ENST00000556718 URB1O60287 2271 aaKnown RBP1.84□□□□□ -2.12
PRPF39-210ENST00000556718 GOLGB1Q14789 3259 aaKnown RBP1.84□□□□□ -2.12
PRPF39-210ENST00000556718 FAM186AA6NE01 2351 aa1.83□□□□□ -2.12
PRPF39-210ENST00000556718 NUPR2A6NF83 97 aa1.83□□□□□ -2.12
PRPF39-210ENST00000556718 J3QKU1 62 aa1.83□□□□□ -2.12
PRPF39-210ENST00000556718 DEFB136Q30KP8 78 aa1.83□□□□□ -2.12
PRPF39-210ENST00000556718 CACNA1EQ15878 2313 aa1.83□□□□□ -2.12
PRPF39-210ENST00000556718 SORL1Q92673 2214 aa1.82□□□□□ -2.12
PRPF39-210ENST00000556718 H3BNG1 76 aa1.82□□□□□ -2.12
PRPF39-210ENST00000556718 SPRR1BP22528 89 aa1.82□□□□□ -2.12
PRPF39-210ENST00000556718 CCL19Q99731 98 aa1.82□□□□□ -2.12
PRPF39-210ENST00000556718 CEP350Q5VT06 3117 aa1.82□□□□□ -2.12
PRPF39-210ENST00000556718 CENPFP49454 3210 aa1.81□□□□□ -2.12
PRPF39-210ENST00000556718 SRCAPQ6ZRS2 3230 aa1.81□□□□□ -2.12
PRPF39-210ENST00000556718 NBEAQ8NFP9 2946 aa1.81□□□□□ -2.12
PRPF39-210ENST00000556718 BAHCC1Q9P281 2608 aa1.81□□□□□ -2.12
PRPF39-210ENST00000556718 HMCN1Q96RW7 5635 aa1.81□□□□□ -2.12
PRPF39-210ENST00000556718 KRTAP13-4Q3LI77 160 aa1.81□□□□□ -2.12
PRPF39-210ENST00000556718 C10orf99Q6UWK7 81 aa1.81□□□□□ -2.12
PRPF39-210ENST00000556718 DEFB124Q8NES8 71 aa1.81□□□□□ -2.12
PRPF39-210ENST00000556718 AHCTF1Q8WYP5 2266 aa1.8□□□□□ -2.12
PRPF39-210ENST00000556718 ICE1Q9Y2F5 2266 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms