RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 LINC00612Q8N6U2 182 aa3.49□□□□□ -1.85
TMEM260-210ENST00000556422 RPL36ALQ969Q0 106 aaKnown RBP3.49□□□□□ -1.85
TMEM260-210ENST00000556422 LIMD2Q9BT23 127 aa3.49□□□□□ -1.85
TMEM260-210ENST00000556422 CDKN2A-AS1Q9UH64 79 aa3.49□□□□□ -1.85
TMEM260-210ENST00000556422 TRBV6-4A0A1B0GX49 114 aa3.49□□□□□ -1.85
TMEM260-210ENST00000556422 TRGV2A0A075B6R0 118 aa3.49□□□□□ -1.85
TMEM260-210ENST00000556422 A0A0J9YXY3 114 aa3.49□□□□□ -1.85
TMEM260-210ENST00000556422 LINC00242Q5T6M2 205 aa3.49□□□□□ -1.85
TMEM260-210ENST00000556422 FAM218AQ96MZ4 157 aa3.49□□□□□ -1.85
TMEM260-210ENST00000556422 PLA2G1BP04054 148 aaKnown RBP3.48□□□□□ -1.85
TMEM260-210ENST00000556422 CDC42SE2Q9NRR3 84 aa3.48□□□□□ -1.85
TMEM260-210ENST00000556422 TENM3Q9P273 2699 aa3.48□□□□□ -1.85
TMEM260-210ENST00000556422 COL6A5A8TX70 2615 aa3.48□□□□□ -1.85
TMEM260-210ENST00000556422 NBEAL1Q6ZS30 2694 aa3.48□□□□□ -1.85
TMEM260-210ENST00000556422 hDV103S1A0JD37 113 aa3.48□□□□□ -1.85
TMEM260-210ENST00000556422 CDK2AP2O75956 126 aa3.48□□□□□ -1.85
TMEM260-210ENST00000556422 CYP4F30PQ9H0H9 118 aa3.48□□□□□ -1.85
TMEM260-210ENST00000556422 NREPQ16612 68 aa3.48□□□□□ -1.85
TMEM260-210ENST00000556422 IGLV5-39A0A0G2JS06 123 aa3.47□□□□□ -1.85
TMEM260-210ENST00000556422 TRBV10-3A0A0K0K1G6 114 aa3.47□□□□□ -1.85
TMEM260-210ENST00000556422 C9orf66Q5T8R8 295 aa3.47□□□□□ -1.85
TMEM260-210ENST00000556422 C1orf134Q5TEV5 83 aa3.47□□□□□ -1.85
TMEM260-210ENST00000556422 TRGV4A0A0C4DH28 118 aa3.47□□□□□ -1.85
TMEM260-210ENST00000556422 KRTAP16-1A8MUX0 517 aa3.47□□□□□ -1.85
TMEM260-210ENST00000556422 SMIM1B2RUZ4 78 aa3.47□□□□□ -1.85
TMEM260-210ENST00000556422 DEFB130BP0DP73 79 aa3.46□□□□□ -1.85
TMEM260-210ENST00000556422 DEFB130AP0DP74 79 aa3.46□□□□□ -1.85
TMEM260-210ENST00000556422 Q5VV11 94 aa3.46□□□□□ -1.85
TMEM260-210ENST00000556422 C1orf64Q8NEQ6 169 aa3.46□□□□□ -1.85
TMEM260-210ENST00000556422 CDC42SE1Q9NRR8 79 aa3.46□□□□□ -1.85
TMEM260-210ENST00000556422 IGLV4-60A0A075B6I1 120 aa3.46□□□□□ -1.86
TMEM260-210ENST00000556422 TRBV6-8A0A0A6YYG3 113 aa3.46□□□□□ -1.86
TMEM260-210ENST00000556422 DEFB135Q30KP9 77 aa3.46□□□□□ -1.86
TMEM260-210ENST00000556422 HIGD2BQ4VC39 106 aa3.46□□□□□ -1.86
TMEM260-210ENST00000556422 TRAV10A0A0B4J240 114 aa3.46□□□□□ -1.86
TMEM260-210ENST00000556422 PRR4Q16378 134 aa3.46□□□□□ -1.86
TMEM260-210ENST00000556422 NDUFA1O15239 70 aa3.45□□□□□ -1.86
TMEM260-210ENST00000556422 NOTCH1P46531 2555 aa3.45□□□□□ -1.86
TMEM260-210ENST00000556422 IGLV9-49A0A0B4J1Y8 123 aa3.45□□□□□ -1.86
TMEM260-210ENST00000556422 DEFB4AO15263 64 aa3.45□□□□□ -1.86
TMEM260-210ENST00000556422 MIAQ16674 131 aa3.45□□□□□ -1.86
TMEM260-210ENST00000556422 Q8NAQ8 132 aa3.45□□□□□ -1.86
TMEM260-210ENST00000556422 LINC00476Q8WZB0 136 aa3.45□□□□□ -1.86
TMEM260-210ENST00000556422 Q8N3U1 123 aa3.44□□□□□ -1.86
TMEM260-210ENST00000556422 IGHV4-28A0A0C4DH34 117 aa3.44□□□□□ -1.86
TMEM260-210ENST00000556422 PSCAO43653 123 aa3.44□□□□□ -1.86
TMEM260-210ENST00000556422 IGHV4-30-4P0DP06 118 aa3.44□□□□□ -1.86
TMEM260-210ENST00000556422 MOBPQ13875 183 aa3.44□□□□□ -1.86
TMEM260-210ENST00000556422 Q8N814 137 aa3.44□□□□□ -1.86
TMEM260-210ENST00000556422 PRO0255Q9UI72 69 aa3.44□□□□□ -1.86
TMEM260-210ENST00000556422 NCR3O14931 201 aa3.43□□□□□ -1.86
TMEM260-210ENST00000556422 Q6ZTC4 211 aa3.43□□□□□ -1.86
TMEM260-210ENST00000556422 LYSTQ99698 3801 aa3.43□□□□□ -1.86
TMEM260-210ENST00000556422 FBN3Q75N90 2809 aa3.43□□□□□ -1.86
TMEM260-210ENST00000556422 A0A096LPF7 62 aa3.43□□□□□ -1.86
TMEM260-210ENST00000556422 ADM2Q7Z4H4 148 aa3.43□□□□□ -1.86
TMEM260-210ENST00000556422 BPY2O14599 106 aa3.42□□□□□ -1.86
TMEM260-210ENST00000556422 KRTAP24-1Q3LI83 254 aa3.42□□□□□ -1.86
TMEM260-210ENST00000556422 IGKV3OR2-268A0A0C4DH90 116 aa3.42□□□□□ -1.86
TMEM260-210ENST00000556422 A0A1B0GUV1 79 aa3.42□□□□□ -1.86
TMEM260-210ENST00000556422 KRTAP10-11P60412 298 aa3.42□□□□□ -1.86
TMEM260-210ENST00000556422 LINC00308Q8TCZ7 52 aa3.42□□□□□ -1.86
TMEM260-210ENST00000556422 HIGD2AQ9BW72 106 aa3.42□□□□□ -1.86
TMEM260-210ENST00000556422 TRBV7-4A0A0J9YYF1 115 aa3.42□□□□□ -1.86
TMEM260-210ENST00000556422 LINC00959A0A1B0GUT2 108 aa3.42□□□□□ -1.86
TMEM260-210ENST00000556422 ORMDL1Q9P0S3 153 aa3.42□□□□□ -1.86
TMEM260-210ENST00000556422 ERC2-IT1O76042 136 aa3.41□□□□□ -1.86
TMEM260-210ENST00000556422 JMJD7-PLA2G4BH0Y9G9 81 aa3.41□□□□□ -1.86
TMEM260-210ENST00000556422 COL7A1Q02388 2944 aa3.41□□□□□ -1.86
TMEM260-210ENST00000556422 HUWE1Q7Z6Z7 4374 aaKnown RBP3.41□□□□□ -1.86
TMEM260-210ENST00000556422 COX7B2Q8TF08 81 aa3.4□□□□□ -1.86
TMEM260-210ENST00000556422 CLPSL2Q6UWE3 100 aa3.4□□□□□ -1.87
TMEM260-210ENST00000556422 EGFEM1PQ0D2K5 195 aa3.4□□□□□ -1.87
TMEM260-210ENST00000556422 LOC101927531A0A1B0GV80 90 aa3.39□□□□□ -1.87
TMEM260-210ENST00000556422 K7ERS5 55 aa3.39□□□□□ -1.87
TMEM260-210ENST00000556422 CHTF8P0CG12 524 aa3.39□□□□□ -1.87
TMEM260-210ENST00000556422 SPAG11BQ08648 103 aa3.39□□□□□ -1.87
TMEM260-210ENST00000556422 SPAG11AQ6PDA7 123 aa3.39□□□□□ -1.87
TMEM260-210ENST00000556422 MIR7-3HGQ8N6C7 128 aa3.39□□□□□ -1.87
TMEM260-210ENST00000556422 TOMM7Q9P0U1 55 aa3.39□□□□□ -1.87
TMEM260-210ENST00000556422 DNAH1Q9P2D7 4330 aa3.39□□□□□ -1.87
TMEM260-210ENST00000556422 SPART-AS1P0CW21 52 aa3.39□□□□□ -1.87
TMEM260-210ENST00000556422 IGKV2-28A0A075B6P5 120 aa3.38□□□□□ -1.87
TMEM260-210ENST00000556422 IGKV2D-28P01615 120 aa3.38□□□□□ -1.87
TMEM260-210ENST00000556422 LECT2O14960 151 aa3.38□□□□□ -1.87
TMEM260-210ENST00000556422 LINC01547P58512 204 aaPredicted RBP3.38□□□□□ -1.87
TMEM260-210ENST00000556422 LUZP6Q538Z0 58 aa3.38□□□□□ -1.87
TMEM260-210ENST00000556422 B9D2Q9BPU9 175 aa3.38□□□□□ -1.87
TMEM260-210ENST00000556422 CSMD3Q7Z407 3707 aa3.38□□□□□ -1.87
TMEM260-210ENST00000556422 HTN3P15516 51 aa3.37□□□□□ -1.87
TMEM260-210ENST00000556422 MGAM2Q2M2H8 2515 aa3.37□□□□□ -1.87
TMEM260-210ENST00000556422 IGLV10-54A0A075B6I4 117 aa3.37□□□□□ -1.87
TMEM260-210ENST00000556422 H0YGX0 51 aa3.37□□□□□ -1.87
TMEM260-210ENST00000556422 MIR22HGQ0VDD5 57 aa3.37□□□□□ -1.87
TMEM260-210ENST00000556422 CSAG1Q6PB30 78 aa3.37□□□□□ -1.87
TMEM260-210ENST00000556422 Q8IZM0 81 aa3.37□□□□□ -1.87
TMEM260-210ENST00000556422 ANGP03950 147 aaKnown RBP3.37□□□□□ -1.87
TMEM260-210ENST00000556422 CCL18P55774 89 aa3.37□□□□□ -1.87
TMEM260-210ENST00000556422 LELP1Q5T871 98 aa3.37□□□□□ -1.87
TMEM260-210ENST00000556422 Q8N9P0 234 aaPredicted RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms