RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 PCP4L1A6NKN8 68 aa3.88□□□□□ -1.79
ATXN3-236ENST00000556220 SMIM1B2RUZ4 78 aa3.88□□□□□ -1.79
ATXN3-236ENST00000556220 NDUFA1O15239 70 aa3.88□□□□□ -1.79
ATXN3-236ENST00000556220 DPM2O94777 84 aa3.88□□□□□ -1.79
ATXN3-236ENST00000556220 IGKCP01834 107 aa3.88□□□□□ -1.79
ATXN3-236ENST00000556220 RPL28P46779 137 aaKnown RBP3.88□□□□□ -1.79
ATXN3-236ENST00000556220 UNQ6190/PRO20217Q6UXQ8 127 aa3.88□□□□□ -1.79
ATXN3-236ENST00000556220 Q75L30 129 aa3.88□□□□□ -1.79
ATXN3-236ENST00000556220 BOD1L2Q8IYS8 172 aa3.88□□□□□ -1.79
ATXN3-236ENST00000556220 Q8NDZ9 215 aa3.88□□□□□ -1.79
ATXN3-236ENST00000556220 C6orf48Q9UBA6 75 aa3.88□□□□□ -1.79
ATXN3-236ENST00000556220 SYNE2Q8WXH0 6885 aaKnown RBP3.88□□□□□ -1.79
ATXN3-236ENST00000556220 TRAV13-1A0A0B4J241 112 aa3.87□□□□□ -1.79
ATXN3-236ENST00000556220 SPINK8P0C7L1 97 aa3.87□□□□□ -1.79
ATXN3-236ENST00000556220 COX8AP10176 69 aa3.87□□□□□ -1.79
ATXN3-236ENST00000556220 KIAA0087Q14695 138 aa3.87□□□□□ -1.79
ATXN3-236ENST00000556220 KRTAP19-2Q3LHN2 52 aa3.87□□□□□ -1.79
ATXN3-236ENST00000556220 KRTAP13-3Q3SY46 172 aa3.87□□□□□ -1.79
ATXN3-236ENST00000556220 ADAMTSL4-AS1Q5T5F5 129 aa3.87□□□□□ -1.79
ATXN3-236ENST00000556220 Q6ZVH6 145 aa3.87□□□□□ -1.79
ATXN3-236ENST00000556220 FP248Q71RG6 208 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-236ENST00000556220 VAMP8Q9BV40 100 aa3.87□□□□□ -1.79
ATXN3-236ENST00000556220 SNHG12Q9BXW3 62 aa3.87□□□□□ -1.79
ATXN3-236ENST00000556220 TINCRA0A1B0GVN0 87 aa3.86□□□□□ -1.79
ATXN3-236ENST00000556220 E9PLD3 99 aa3.86□□□□□ -1.79
ATXN3-236ENST00000556220 DDTP30046 118 aa3.86□□□□□ -1.79
ATXN3-236ENST00000556220 FAM229BQ4G0N7 80 aa3.86□□□□□ -1.79
ATXN3-236ENST00000556220 C9orf129Q5T035 196 aaKnown RBP3.86□□□□□ -1.79
ATXN3-236ENST00000556220 SOSTDC1Q6X4U4 206 aa3.86□□□□□ -1.79
ATXN3-236ENST00000556220 ORAOV1Q8WV07 137 aa3.86□□□□□ -1.79
ATXN3-236ENST00000556220 C22orf24Q9Y442 160 aa3.86□□□□□ -1.79
ATXN3-236ENST00000556220 FLGP20930 4061 aaPredicted RBP3.86□□□□□ -1.79
ATXN3-236ENST00000556220 BCE1O60756 84 aa3.85□□□□□ -1.79
ATXN3-236ENST00000556220 Q6ZN92 141 aa3.85□□□□□ -1.79
ATXN3-236ENST00000556220 ZNF625Q96I27 306 aaPredicted RBP3.85□□□□□ -1.79
ATXN3-236ENST00000556220 MIEN1Q9BRT3 115 aa3.85□□□□□ -1.79
ATXN3-236ENST00000556220 NDUFC2-KCTD14E9PQ53 114 aa3.84□□□□□ -1.79
ATXN3-236ENST00000556220 DLEU1O43261 78 aa3.84□□□□□ -1.79
ATXN3-236ENST00000556220 KRTAP5-1Q6L8H4 278 aa3.84□□□□□ -1.79
ATXN3-236ENST00000556220 VCX2Q9H322 139 aa3.84□□□□□ -1.79
ATXN3-236ENST00000556220 IGLV5-37A0A075B6J1 123 aa3.83□□□□□ -1.8
ATXN3-236ENST00000556220 TRBV30A0A0K0K1B3 111 aa3.83□□□□□ -1.8
ATXN3-236ENST00000556220 LEPROTO15243 131 aa3.83□□□□□ -1.8
ATXN3-236ENST00000556220 NMUP48645 174 aa3.83□□□□□ -1.8
ATXN3-236ENST00000556220 FXYD2P54710 66 aa3.83□□□□□ -1.8
ATXN3-236ENST00000556220 C2orf82Q6UX34 121 aa3.83□□□□□ -1.8
ATXN3-236ENST00000556220 PLNP26678 52 aa3.82□□□□□ -1.8
ATXN3-236ENST00000556220 SMAGPQ0VAQ4 97 aa3.82□□□□□ -1.8
ATXN3-236ENST00000556220 BVES-AS1Q5T3Y7 98 aa3.82□□□□□ -1.8
ATXN3-236ENST00000556220 TMEM170BQ5T4T1 132 aa3.82□□□□□ -1.8
ATXN3-236ENST00000556220 SPAG11AQ6PDA7 123 aa3.82□□□□□ -1.8
ATXN3-236ENST00000556220 LINC00469Q8N7U9 141 aa3.82□□□□□ -1.8
ATXN3-236ENST00000556220 MACF1Q9UPN3 7388 aaKnown RBP3.81□□□□□ -1.8
ATXN3-236ENST00000556220 A0A0J9YXY3 114 aa3.81□□□□□ -1.8
ATXN3-236ENST00000556220 C20orf202A1L168 122 aa3.81□□□□□ -1.8
ATXN3-236ENST00000556220 J3QQQ9 107 aa3.81□□□□□ -1.8
ATXN3-236ENST00000556220 MRPL55Q7Z7F7 128 aaKnown RBP3.81□□□□□ -1.8
ATXN3-236ENST00000556220 KRTAP13-1Q8IUC0 172 aa3.81□□□□□ -1.8
ATXN3-236ENST00000556220 DAND5Q8N907 189 aa3.81□□□□□ -1.8
ATXN3-236ENST00000556220 UQCR10Q9UDW1 63 aa3.81□□□□□ -1.8
ATXN3-236ENST00000556220 MYMXA0A1B0GTQ4 84 aa3.8□□□□□ -1.8
ATXN3-236ENST00000556220 K7ERJ3 54 aa3.8□□□□□ -1.8
ATXN3-236ENST00000556220 HINT1P49773 126 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-236ENST00000556220 SLC25A34Q6PIV7 304 aa3.8□□□□□ -1.8
ATXN3-236ENST00000556220 LINC01549A6NIU2 74 aa3.79□□□□□ -1.8
ATXN3-236ENST00000556220 ZNF815PA8K554 130 aa3.79□□□□□ -1.8
ATXN3-236ENST00000556220 KRTAP9-6A8MVA2 160 aa3.79□□□□□ -1.8
ATXN3-236ENST00000556220 M0R2T5 61 aa3.79□□□□□ -1.8
ATXN3-236ENST00000556220 TAX1BP3O14907 124 aa3.79□□□□□ -1.8
ATXN3-236ENST00000556220 UBE2AP49459 152 aa3.79□□□□□ -1.8
ATXN3-236ENST00000556220 C3orf22Q8N5N4 141 aa3.79□□□□□ -1.8
ATXN3-236ENST00000556220 LINC00167Q96N53 147 aa3.79□□□□□ -1.8
ATXN3-236ENST00000556220 HIGD1BQ9P298 99 aa3.79□□□□□ -1.8
ATXN3-236ENST00000556220 RPL37AP8A6NKH3 93 aa3.78□□□□□ -1.8
ATXN3-236ENST00000556220 G0S2P27469 103 aa3.78□□□□□ -1.8
ATXN3-236ENST00000556220 KRTAP10-12P60413 245 aa3.78□□□□□ -1.8
ATXN3-236ENST00000556220 HERVK_113P63121 156 aa3.78□□□□□ -1.8
ATXN3-236ENST00000556220 S100A12P80511 92 aa3.78□□□□□ -1.8
ATXN3-236ENST00000556220 NAA38Q9BRA0 125 aaKnown RBP3.78□□□□□ -1.8
ATXN3-236ENST00000556220 XAGE1AQ9HD64 81 aa3.78□□□□□ -1.8
ATXN3-236ENST00000556220 NDUFA12Q9UI09 145 aa3.78□□□□□ -1.8
ATXN3-236ENST00000556220 IGKV2-28A0A075B6P5 120 aa3.77□□□□□ -1.81
ATXN3-236ENST00000556220 A0A0U1RRA0 63 aa3.77□□□□□ -1.81
ATXN3-236ENST00000556220 A0A1B0GWB2 263 aa3.77□□□□□ -1.81
ATXN3-236ENST00000556220 TSTD3H0UI37 97 aa3.77□□□□□ -1.81
ATXN3-236ENST00000556220 IGKV2D-28P01615 120 aa3.77□□□□□ -1.81
ATXN3-236ENST00000556220 SMIM13P0DJ93 91 aa3.77□□□□□ -1.81
ATXN3-236ENST00000556220 COX7B2Q8TF08 81 aa3.77□□□□□ -1.81
ATXN3-236ENST00000556220 C2orf88Q9BSF0 95 aa3.77□□□□□ -1.81
ATXN3-236ENST00000556220 GEMIN7Q9H840 131 aaKnown RBP3.77□□□□□ -1.81
ATXN3-236ENST00000556220 SPANXB1Q9NS25 103 aaPredicted RBP3.77□□□□□ -1.81
ATXN3-236ENST00000556220 A0A1B0GV90 55 aa3.76□□□□□ -1.81
ATXN3-236ENST00000556220 NPC2P61916 151 aa3.76□□□□□ -1.81
ATXN3-236ENST00000556220 LINC01561Q8N1V8 128 aa3.76□□□□□ -1.81
ATXN3-236ENST00000556220 CFC1P0CG37 223 aa3.75□□□□□ -1.81
ATXN3-236ENST00000556220 HSD52Q0P140 79 aa3.75□□□□□ -1.81
ATXN3-236ENST00000556220 MUSTN1Q8IVN3 82 aa3.75□□□□□ -1.81
ATXN3-236ENST00000556220 Q8IZM0 81 aa3.75□□□□□ -1.81
ATXN3-236ENST00000556220 CEND1Q8N111 149 aa3.75□□□□□ -1.81
ATXN3-236ENST00000556220 IGLV8-61A0A075B6I0 122 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms