RNA–Protein interactions for RNA: ENST00000556138.1

LINC01550-205, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 4

Gene LINC01550, Length 538 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-205ENST00000556138 NUP35Q8NFH5 326 aa1.46□□□□□ -2.18
LINC01550-205ENST00000556138 C20orf78Q9BR46 151 aa1.46□□□□□ -2.18
LINC01550-205ENST00000556138 SMIM3Q9BZL3 60 aa1.46□□□□□ -2.18
LINC01550-205ENST00000556138 BATF3Q9NR55 127 aa1.46□□□□□ -2.18
LINC01550-205ENST00000556138 CDC42SE2Q9NRR3 84 aa1.46□□□□□ -2.18
LINC01550-205ENST00000556138 SPANXA1Q9NS26 97 aa1.46□□□□□ -2.18
LINC01550-205ENST00000556138 RNF213Q63HN8 5207 aa1.46□□□□□ -2.18
LINC01550-205ENST00000556138 A0A096LNI7 61 aa1.45□□□□□ -2.18
LINC01550-205ENST00000556138 A0A1B0GVG6 124 aa1.45□□□□□ -2.18
LINC01550-205ENST00000556138 KANTRA0A1W2PQU2 76 aa1.45□□□□□ -2.18
LINC01550-205ENST00000556138 SDHAF1A6NFY7 115 aa1.45□□□□□ -2.18
LINC01550-205ENST00000556138 H3BPC8 53 aa1.45□□□□□ -2.18
LINC01550-205ENST00000556138 NDUFA1O15239 70 aa1.45□□□□□ -2.18
LINC01550-205ENST00000556138 PPBPP02775 128 aa1.45□□□□□ -2.18
LINC01550-205ENST00000556138 RPL28P46779 137 aaKnown RBP1.45□□□□□ -2.18
LINC01550-205ENST00000556138 POLR2KP53803 58 aaKnown RBP1.45□□□□□ -2.18
LINC01550-205ENST00000556138 RPS29P62273 56 aaKnown RBP1.45□□□□□ -2.18
LINC01550-205ENST00000556138 RPL7L1Q6DKI1 246 aaKnown RBP1.45□□□□□ -2.18
LINC01550-205ENST00000556138 SFTA2Q6UW10 78 aa1.45□□□□□ -2.18
LINC01550-205ENST00000556138 FP248Q71RG6 208 aaPredicted RBP1.45□□□□□ -2.18
LINC01550-205ENST00000556138 KCNRGQ8N5I3 272 aa1.45□□□□□ -2.18
LINC01550-205ENST00000556138 SFT2D1Q8WV19 159 aa1.45□□□□□ -2.18
LINC01550-205ENST00000556138 TMEM191AQ9H0A3 160 aa1.45□□□□□ -2.18
LINC01550-205ENST00000556138 ST20Q9HBF5 79 aa1.45□□□□□ -2.18
LINC01550-205ENST00000556138 LAMTOR2Q9Y2Q5 125 aa1.45□□□□□ -2.18
LINC01550-205ENST00000556138 A0A1B0GUT8 65 aa1.44□□□□□ -2.18
LINC01550-205ENST00000556138 MGPP08493 103 aa1.44□□□□□ -2.18
LINC01550-205ENST00000556138 CRYGAP11844 174 aa1.44□□□□□ -2.18
LINC01550-205ENST00000556138 HIST1H4AP62805 103 aaKnown RBP1.44□□□□□ -2.18
LINC01550-205ENST00000556138 IFITM2Q01629 132 aa1.44□□□□□ -2.18
LINC01550-205ENST00000556138 C9orf116Q5BN46 136 aaPredicted RBP1.44□□□□□ -2.18
LINC01550-205ENST00000556138 C1orf137Q5JT78 98 aa1.44□□□□□ -2.18
LINC01550-205ENST00000556138 LYZL1Q6UWQ5 148 aa1.44□□□□□ -2.18
LINC01550-205ENST00000556138 FXYD6-FXYD2A0A087WZ82 144 aa1.43□□□□□ -2.18
LINC01550-205ENST00000556138 TMSB15BA0A087X1C1 80 aa1.43□□□□□ -2.18
LINC01550-205ENST00000556138 TGIF2-C20orf24A0A0A6YYL0 155 aa1.43□□□□□ -2.18
LINC01550-205ENST00000556138 F8W036 122 aa1.43□□□□□ -2.18
LINC01550-205ENST00000556138 SRP19P09132 144 aaKnown RBP1.43□□□□□ -2.18
LINC01550-205ENST00000556138 PRB4P10163 310 aaPredicted RBP1.43□□□□□ -2.18
LINC01550-205ENST00000556138 BCL2P10415 239 aa1.43□□□□□ -2.18
LINC01550-205ENST00000556138 HRES1P13985 223 aa1.43□□□□□ -2.18
LINC01550-205ENST00000556138 FCER1GP30273 86 aa1.43□□□□□ -2.18
LINC01550-205ENST00000556138 XCL1P47992 114 aa1.43□□□□□ -2.18
LINC01550-205ENST00000556138 HBBP68871 147 aa1.43□□□□□ -2.18
LINC01550-205ENST00000556138 KRTAP25-1Q3LHN0 102 aa1.43□□□□□ -2.18
LINC01550-205ENST00000556138 CLPSL2Q6UWE3 100 aa1.43□□□□□ -2.18
LINC01550-205ENST00000556138 ADM2Q7Z4H4 148 aa1.43□□□□□ -2.18
LINC01550-205ENST00000556138 Q8IZM0 81 aa1.43□□□□□ -2.18
LINC01550-205ENST00000556138 FAM19A2Q8N3H0 131 aa1.43□□□□□ -2.18
LINC01550-205ENST00000556138 SMCR5Q8TEV8 140 aa1.43□□□□□ -2.18
LINC01550-205ENST00000556138 MIEN1Q9BRT3 115 aa1.43□□□□□ -2.18
LINC01550-205ENST00000556138 OSTCQ9NRP0 149 aa1.43□□□□□ -2.18
LINC01550-205ENST00000556138 UBE2D4Q9Y2X8 147 aa1.43□□□□□ -2.18
LINC01550-205ENST00000556138 A0A1W2PNN7 141 aa1.42□□□□□ -2.18
LINC01550-205ENST00000556138 ARPC5O15511 151 aa1.42□□□□□ -2.18
LINC01550-205ENST00000556138 BCE1O60756 84 aa1.42□□□□□ -2.18
LINC01550-205ENST00000556138 IFI27P40305 119 aaPredicted RBP1.42□□□□□ -2.18
LINC01550-205ENST00000556138 SPAG11BQ08648 103 aa1.42□□□□□ -2.18
LINC01550-205ENST00000556138 COX17Q14061 63 aa1.42□□□□□ -2.18
LINC01550-205ENST00000556138 FAM213BQ8TBF2 198 aa1.42□□□□□ -2.18
LINC01550-205ENST00000556138 C2orf88Q9BSF0 95 aa1.42□□□□□ -2.18
LINC01550-205ENST00000556138 KRTAP4-1Q9BYQ7 146 aa1.42□□□□□ -2.18
LINC01550-205ENST00000556138 MED9Q9NWA0 146 aa1.42□□□□□ -2.18
LINC01550-205ENST00000556138 GNG13Q9P2W3 67 aa1.42□□□□□ -2.18
LINC01550-205ENST00000556138 NAT8BQ9UHF3 227 aa1.42□□□□□ -2.18
LINC01550-205ENST00000556138 NDUFA12Q9UI09 145 aa1.42□□□□□ -2.18
LINC01550-205ENST00000556138 TRBV20OR9-2A0A075B6H5 130 aa1.41□□□□□ -2.18
LINC01550-205ENST00000556138 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.41□□□□□ -2.18
LINC01550-205ENST00000556138 IGKV2-29A2NJV5 120 aaPredicted RBP1.41□□□□□ -2.18
LINC01550-205ENST00000556138 ZNF727A8MUV8 499 aa1.41□□□□□ -2.18
LINC01550-205ENST00000556138 HIGD1CA8MV81 97 aa1.41□□□□□ -2.18
LINC01550-205ENST00000556138 F8VRH5 84 aa1.41□□□□□ -2.18
LINC01550-205ENST00000556138 SPINK1P00995 79 aa1.41□□□□□ -2.18
LINC01550-205ENST00000556138 CKS1BP61024 79 aa1.41□□□□□ -2.18
LINC01550-205ENST00000556138 UBE2BP63146 152 aa1.41□□□□□ -2.18
LINC01550-205ENST00000556138 ASB16-AS1Q495Z4 193 aa1.41□□□□□ -2.18
LINC01550-205ENST00000556138 ALKAL2Q6UX46 152 aa1.41□□□□□ -2.18
LINC01550-205ENST00000556138 TMEM141Q96I45 108 aa1.41□□□□□ -2.18
LINC01550-205ENST00000556138 MUC2Q02817 5179 aa1.41□□□□□ -2.18
LINC01550-205ENST00000556138 IGKV2D-26A0A0A0MRZ7 120 aa1.4□□□□□ -2.19
LINC01550-205ENST00000556138 TRAV13-1A0A0B4J241 112 aa1.4□□□□□ -2.19
LINC01550-205ENST00000556138 IGKV3OR2-268A0A0C4DH90 116 aa1.4□□□□□ -2.19
LINC01550-205ENST00000556138 MUC21A0A0G2JKD1 596 aa1.4□□□□□ -2.19
LINC01550-205ENST00000556138 A0A1W2PNM2 257 aa1.4□□□□□ -2.19
LINC01550-205ENST00000556138 SMIM27A0A1W2PRY6 76 aa1.4□□□□□ -2.19
LINC01550-205ENST00000556138 LINC00587B1AMM8 73 aa1.4□□□□□ -2.19
LINC01550-205ENST00000556138 LST1O00453 97 aa1.4□□□□□ -2.19
LINC01550-205ENST00000556138 LGALS3P17931 250 aaKnown RBP1.4□□□□□ -2.19
LINC01550-205ENST00000556138 S100A12P80511 92 aa1.4□□□□□ -2.19
LINC01550-205ENST00000556138 Q5BKY6 102 aa1.4□□□□□ -2.19
LINC01550-205ENST00000556138 PHF5AQ7RTV0 110 aaKnown RBP1.4□□□□□ -2.19
LINC01550-205ENST00000556138 TCTE3Q8IZS6 198 aa1.4□□□□□ -2.19
LINC01550-205ENST00000556138 DAND5Q8N907 189 aa1.4□□□□□ -2.19
LINC01550-205ENST00000556138 RPL39LQ96EH5 51 aaKnown RBP1.4□□□□□ -2.19
LINC01550-205ENST00000556138 AMELXQ99217 191 aa1.4□□□□□ -2.19
LINC01550-205ENST00000556138 SMIM2Q9BVW6 85 aa1.4□□□□□ -2.19
LINC01550-205ENST00000556138 NXT2Q9NPJ8 142 aaKnown RBP1.4□□□□□ -2.19
LINC01550-205ENST00000556138 TMEM242Q9NWH2 141 aa1.4□□□□□ -2.19
LINC01550-205ENST00000556138 C6orf48Q9UBA6 75 aa1.4□□□□□ -2.19
LINC01550-205ENST00000556138 CYSLTR1Q9Y271 337 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms