RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 F8W1H4 67 aa4.52□□□□□ -1.69
SLIRP-204ENST00000555890 UNQ6190/PRO20217Q6UXQ8 127 aa4.52□□□□□ -1.69
SLIRP-204ENST00000555890 UBE2DNLQ8IWF7 75 aa4.52□□□□□ -1.69
SLIRP-204ENST00000555890 NTN5Q8WTR8 489 aaPredicted RBP4.52□□□□□ -1.69
SLIRP-204ENST00000555890 GVQW2A0A096LPI5 108 aaPredicted RBP4.51□□□□□ -1.69
SLIRP-204ENST00000555890 NUPR2A6NF83 97 aa4.51□□□□□ -1.69
SLIRP-204ENST00000555890 H3BMG7 143 aa4.51□□□□□ -1.69
SLIRP-204ENST00000555890 ATXN8Q156A1 80 aa4.51□□□□□ -1.69
SLIRP-204ENST00000555890 KRTAP26-1Q6PEX3 210 aa4.51□□□□□ -1.69
SLIRP-204ENST00000555890 C2orf48Q96LS8 159 aa4.51□□□□□ -1.69
SLIRP-204ENST00000555890 CAMK2N2Q96S95 79 aa4.51□□□□□ -1.69
SLIRP-204ENST00000555890 Q9HAA7 133 aa4.51□□□□□ -1.69
SLIRP-204ENST00000555890 APLNQ9ULZ1 77 aa4.51□□□□□ -1.69
SLIRP-204ENST00000555890 NDUFC2O95298 119 aa4.5□□□□□ -1.69
SLIRP-204ENST00000555890 TCL1BO95988 128 aa4.5□□□□□ -1.69
SLIRP-204ENST00000555890 Q5VSD8 79 aa4.5□□□□□ -1.69
SLIRP-204ENST00000555890 C6orf223Q8N319 242 aa4.5□□□□□ -1.69
SLIRP-204ENST00000555890 HIGD2BQ4VC39 106 aa4.49□□□□□ -1.69
SLIRP-204ENST00000555890 OR13C6PQ8NH95 151 aa4.49□□□□□ -1.69
SLIRP-204ENST00000555890 LINC00526Q96FQ7 95 aa4.49□□□□□ -1.69
SLIRP-204ENST00000555890 IGKV2-28A0A075B6P5 120 aa4.48□□□□□ -1.69
SLIRP-204ENST00000555890 IGLV9-49A0A0B4J1Y8 123 aa4.48□□□□□ -1.69
SLIRP-204ENST00000555890 RTL8CO15255 209 aa4.48□□□□□ -1.69
SLIRP-204ENST00000555890 IGKV2D-28P01615 120 aa4.48□□□□□ -1.69
SLIRP-204ENST00000555890 RPL28P46779 137 aaKnown RBP4.48□□□□□ -1.69
SLIRP-204ENST00000555890 C9orf116Q5BN46 136 aaPredicted RBP4.48□□□□□ -1.69
SLIRP-204ENST00000555890 C15orf56Q8N910 161 aa4.48□□□□□ -1.69
SLIRP-204ENST00000555890 C6orf48Q9UBA6 75 aa4.48□□□□□ -1.69
SLIRP-204ENST00000555890 H0YGX0 51 aa4.47□□□□□ -1.69
SLIRP-204ENST00000555890 SYCNQ0VAF6 134 aa4.47□□□□□ -1.69
SLIRP-204ENST00000555890 LINC00337Q8N6G1 96 aa4.47□□□□□ -1.69
SLIRP-204ENST00000555890 TMEM126AQ9H061 195 aa4.47□□□□□ -1.69
SLIRP-204ENST00000555890 PRO0461Q9UI25 63 aa4.47□□□□□ -1.69
SLIRP-204ENST00000555890 C9JAW5 83 aa4.46□□□□□ -1.7
SLIRP-204ENST00000555890 K7ERU9 68 aa4.46□□□□□ -1.7
SLIRP-204ENST00000555890 LST1O00453 97 aa4.46□□□□□ -1.7
SLIRP-204ENST00000555890 WFDC2Q14508 124 aa4.46□□□□□ -1.7
SLIRP-204ENST00000555890 LINC01620Q4KN68 170 aa4.46□□□□□ -1.7
SLIRP-204ENST00000555890 TTC32Q5I0X7 151 aa4.46□□□□□ -1.7
SLIRP-204ENST00000555890 S100A7L2Q5SY68 101 aa4.46□□□□□ -1.7
SLIRP-204ENST00000555890 Q6ZRU5 148 aa4.46□□□□□ -1.7
SLIRP-204ENST00000555890 SSPOA2VEC9 5147 aa4.46□□□□□ -1.7
SLIRP-204ENST00000555890 TRBV10-2A0A0K0K1G8 114 aa4.45□□□□□ -1.7
SLIRP-204ENST00000555890 NDUFC2-KCTD14E9PQ53 114 aa4.45□□□□□ -1.7
SLIRP-204ENST00000555890 J3QR89 54 aa4.45□□□□□ -1.7
SLIRP-204ENST00000555890 M0QXV9 152 aa4.45□□□□□ -1.7
SLIRP-204ENST00000555890 PSCAO43653 123 aa4.45□□□□□ -1.7
SLIRP-204ENST00000555890 SLC25A20O43772 301 aa4.45□□□□□ -1.7
SLIRP-204ENST00000555890 OCIAD2Q56VL3 154 aa4.45□□□□□ -1.7
SLIRP-204ENST00000555890 SMIM11BQ8TCY0 68 aa4.45□□□□□ -1.7
SLIRP-204ENST00000555890 CLEC2BQ92478 149 aa4.45□□□□□ -1.7
SLIRP-204ENST00000555890 CARD19Q96LW7 228 aa4.45□□□□□ -1.7
SLIRP-204ENST00000555890 NEBP20929 6669 aa4.44□□□□□ -1.7
SLIRP-204ENST00000555890 SNCGO76070 127 aa4.44□□□□□ -1.7
SLIRP-204ENST00000555890 TRACP01848 142 aa4.44□□□□□ -1.7
SLIRP-204ENST00000555890 PRR3P79522 188 aaKnown RBP4.44□□□□□ -1.7
SLIRP-204ENST00000555890 ETDBQ3ZM63 59 aa4.44□□□□□ -1.7
SLIRP-204ENST00000555890 MTURNQ8N3F0 131 aa4.44□□□□□ -1.7
SLIRP-204ENST00000555890 CBY1Q9Y3M2 126 aa4.44□□□□□ -1.7
SLIRP-204ENST00000555890 LRP1Q07954 4544 aaKnown RBP4.44□□□□□ -1.7
SLIRP-204ENST00000555890 H3BT86 120 aa4.43□□□□□ -1.7
SLIRP-204ENST00000555890 NCR3O14931 201 aa4.43□□□□□ -1.7
SLIRP-204ENST00000555890 TLX1NBP0CAT3 122 aa4.43□□□□□ -1.7
SLIRP-204ENST00000555890 KRTAP15-1Q3LI76 137 aa4.43□□□□□ -1.7
SLIRP-204ENST00000555890 C14orf177Q52M58 125 aa4.43□□□□□ -1.7
SLIRP-204ENST00000555890 TEN1Q86WV5 123 aa4.43□□□□□ -1.7
SLIRP-204ENST00000555890 ANKRD29Q8N6D5 301 aa4.43□□□□□ -1.7
SLIRP-204ENST00000555890 LINC01600Q96MT4 127 aa4.43□□□□□ -1.7
SLIRP-204ENST00000555890 XAGE1AQ9HD64 81 aa4.43□□□□□ -1.7
SLIRP-204ENST00000555890 NBDYA0A0U1RRE5 68 aa4.42□□□□□ -1.7
SLIRP-204ENST00000555890 M0R378 163 aa4.42□□□□□ -1.7
SLIRP-204ENST00000555890 RPL18AQ02543 176 aaKnown RBP4.42□□□□□ -1.7
SLIRP-204ENST00000555890 PPDPFLQ8WWR9 84 aa4.42□□□□□ -1.7
SLIRP-204ENST00000555890 FAT3Q8TDW7 4589 aa4.41□□□□□ -1.7
SLIRP-204ENST00000555890 LOC107984640A0A0U1RRK4 108 aa4.41□□□□□ -1.7
SLIRP-204ENST00000555890 A0A1B0GX51 115 aa4.41□□□□□ -1.7
SLIRP-204ENST00000555890 DNAL4O96015 105 aa4.41□□□□□ -1.7
SLIRP-204ENST00000555890 IGLV6-57P01721 117 aa4.41□□□□□ -1.7
SLIRP-204ENST00000555890 Q6ZRP5 223 aa4.41□□□□□ -1.7
SLIRP-204ENST00000555890 KRTAP1-5Q9BYS1 174 aa4.41□□□□□ -1.7
SLIRP-204ENST00000555890 LECT2O14960 151 aa4.4□□□□□ -1.71
SLIRP-204ENST00000555890 BAALC-AS2P0C853 105 aa4.4□□□□□ -1.71
SLIRP-204ENST00000555890 NKAPP1Q8N9T2 125 aa4.4□□□□□ -1.71
SLIRP-204ENST00000555890 Q8NDZ9 215 aa4.4□□□□□ -1.71
SLIRP-204ENST00000555890 PKIGQ9Y2B9 76 aa4.4□□□□□ -1.71
SLIRP-204ENST00000555890 SYNE2Q8WXH0 6885 aaKnown RBP4.39□□□□□ -1.71
SLIRP-204ENST00000555890 DNAH8Q96JB1 4490 aa4.39□□□□□ -1.71
SLIRP-204ENST00000555890 GPR98Q8WXG9 6306 aa4.39□□□□□ -1.71
SLIRP-204ENST00000555890 TRAV23DV6A0A075B6W5 121 aa4.39□□□□□ -1.71
SLIRP-204ENST00000555890 TRBV10-3A0A0K0K1G6 114 aa4.39□□□□□ -1.71
SLIRP-204ENST00000555890 SLPIP03973 132 aa4.39□□□□□ -1.71
SLIRP-204ENST00000555890 C6orf99Q4VX62 202 aa4.39□□□□□ -1.71
SLIRP-204ENST00000555890 Q6ZVQ6 151 aa4.39□□□□□ -1.71
SLIRP-204ENST00000555890 FAM218AQ96MZ4 157 aa4.39□□□□□ -1.71
SLIRP-204ENST00000555890 VPS25Q9BRG1 176 aa4.39□□□□□ -1.71
SLIRP-204ENST00000555890 A0A087WYN8 130 aa4.38□□□□□ -1.71
SLIRP-204ENST00000555890 TRBV7-6A0A0J9YX20 115 aa4.38□□□□□ -1.71
SLIRP-204ENST00000555890 CNBPP62633 177 aaKnown RBP4.38□□□□□ -1.71
SLIRP-204ENST00000555890 C9orf129Q5T035 196 aaKnown RBP4.38□□□□□ -1.71
SLIRP-204ENST00000555890 DIRC1Q969H9 104 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms