RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 M0QY20 66 aa1.36□□□□□ -2.19
MTHFD1-212ENST00000555858 KRTAP10-1P60331 282 aa1.36□□□□□ -2.19
MTHFD1-212ENST00000555858 MINOS1Q5TGZ0 78 aa1.36□□□□□ -2.19
MTHFD1-212ENST00000555858 PDE4DIPQ5VU43 2346 aa1.36□□□□□ -2.19
MTHFD1-212ENST00000555858 KRTAP5-1Q6L8H4 278 aa1.36□□□□□ -2.19
MTHFD1-212ENST00000555858 Q6ZRN7 208 aaPredicted RBP1.36□□□□□ -2.19
MTHFD1-212ENST00000555858 ALPK2Q86TB3 2170 aa1.36□□□□□ -2.19
MTHFD1-212ENST00000555858 TMEM167AQ8TBQ9 72 aa1.36□□□□□ -2.19
MTHFD1-212ENST00000555858 CACNA1CQ13936 2221 aa1.36□□□□□ -2.19
MTHFD1-212ENST00000555858 PRB3Q04118 309 aaPredicted RBP1.35□□□□□ -2.19
MTHFD1-212ENST00000555858 SPINK13Q1W4C9 94 aa1.35□□□□□ -2.19
MTHFD1-212ENST00000555858 ANKRD17O75179 2603 aaKnown RBP1.35□□□□□ -2.19
MTHFD1-212ENST00000555858 BPTFQ12830 3046 aa1.34□□□□□ -2.19
MTHFD1-212ENST00000555858 DEFB131AP59861 70 aa1.34□□□□□ -2.19
MTHFD1-212ENST00000555858 CRIPTQ9P021 101 aa1.34□□□□□ -2.19
MTHFD1-212ENST00000555858 F5P12259 2224 aa1.34□□□□□ -2.2
MTHFD1-212ENST00000555858 RP1P56715 2156 aa1.33□□□□□ -2.2
MTHFD1-212ENST00000555858 KRTAP6-3Q3LI67 103 aa1.33□□□□□ -2.2
MTHFD1-212ENST00000555858 PCOTHQ58A44 107 aa1.33□□□□□ -2.2
MTHFD1-212ENST00000555858 USMG5Q96IX5 58 aa1.33□□□□□ -2.2
MTHFD1-212ENST00000555858 MRPL34Q9BQ48 92 aaKnown RBP1.33□□□□□ -2.2
MTHFD1-212ENST00000555858 HIVEP2P31629 2446 aa1.32□□□□□ -2.2
MTHFD1-212ENST00000555858 CADP27708 2225 aa1.32□□□□□ -2.2
MTHFD1-212ENST00000555858 H0YAA0 97 aa1.32□□□□□ -2.2
MTHFD1-212ENST00000555858 WT1-ASQ06250 92 aa1.32□□□□□ -2.2
MTHFD1-212ENST00000555858 WFDC13Q8IUB5 93 aa1.32□□□□□ -2.2
MTHFD1-212ENST00000555858 LEAP2Q969E1 77 aa1.32□□□□□ -2.2
MTHFD1-212ENST00000555858 KNTC1P50748 2209 aa1.32□□□□□ -2.2
MTHFD1-212ENST00000555858 K7EIM0 57 aa1.31□□□□□ -2.2
MTHFD1-212ENST00000555858 RPL37P61927 97 aaKnown RBP1.31□□□□□ -2.2
MTHFD1-212ENST00000555858 DEFB103AP81534 67 aa1.31□□□□□ -2.2
MTHFD1-212ENST00000555858 WFDC10BQ8IUB3 73 aa1.31□□□□□ -2.2
MTHFD1-212ENST00000555858 UBE2DNLQ8IWF7 75 aa1.31□□□□□ -2.2
MTHFD1-212ENST00000555858 DEFB123Q8N688 67 aa1.31□□□□□ -2.2
MTHFD1-212ENST00000555858 RTTNQ86VV8 2226 aa1.31□□□□□ -2.2
MTHFD1-212ENST00000555858 EP400Q96L91 3159 aa1.3□□□□□ -2.2
MTHFD1-212ENST00000555858 MMP24-AS1A0A0U1RRL7 71 aa1.3□□□□□ -2.2
MTHFD1-212ENST00000555858 COX6A2Q02221 97 aa1.3□□□□□ -2.2
MTHFD1-212ENST00000555858 KRTAP5-5Q701N2 237 aaPredicted RBP1.3□□□□□ -2.2
MTHFD1-212ENST00000555858 KRTAP4-4Q9BYR3 166 aa1.3□□□□□ -2.2
MTHFD1-212ENST00000555858 LYNX1P0DP58 116 aa1.29□□□□□ -2.2
MTHFD1-212ENST00000555858 KRTAP13-4Q3LI77 160 aa1.29□□□□□ -2.2
MTHFD1-212ENST00000555858 RPL39P5Q59GN2 51 aa1.29□□□□□ -2.2
MTHFD1-212ENST00000555858 KRTAP13-1Q8IUC0 172 aa1.29□□□□□ -2.2
MTHFD1-212ENST00000555858 USF3Q68DE3 2245 aa1.28□□□□□ -2.2
MTHFD1-212ENST00000555858 PTPRQQ9UMZ3 2332 aa1.28□□□□□ -2.2
MTHFD1-212ENST00000555858 FN1P02751 2386 aaKnown RBP1.28□□□□□ -2.2
MTHFD1-212ENST00000555858 KLK9Q2XQG4 91 aa1.28□□□□□ -2.2
MTHFD1-212ENST00000555858 H1FX-AS1Q4G0G2 97 aa1.28□□□□□ -2.2
MTHFD1-212ENST00000555858 KRTAP5-4Q6L8H1 288 aa1.28□□□□□ -2.2
MTHFD1-212ENST00000555858 UNQ6190/PRO20217Q6UXQ8 127 aa1.28□□□□□ -2.2
MTHFD1-212ENST00000555858 Q6ZSA8 131 aa1.28□□□□□ -2.2
MTHFD1-212ENST00000555858 BAHCC1Q9P281 2608 aa1.28□□□□□ -2.2
MTHFD1-212ENST00000555858 ALMS1Q8TCU4 4167 aa1.27□□□□□ -2.21
MTHFD1-212ENST00000555858 SRCAPQ6ZRS2 3230 aa1.27□□□□□ -2.21
MTHFD1-212ENST00000555858 CACNA1EQ15878 2313 aa1.27□□□□□ -2.21
MTHFD1-212ENST00000555858 PLCE1Q9P212 2302 aa1.27□□□□□ -2.21
MTHFD1-212ENST00000555858 DEFB109BQ30KR1 87 aa1.27□□□□□ -2.21
MTHFD1-212ENST00000555858 KAAG1Q9UBP8 84 aa1.27□□□□□ -2.21
MTHFD1-212ENST00000555858 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.27□□□□□ -2.21
MTHFD1-212ENST00000555858 TECTAO75443 2155 aa1.27□□□□□ -2.21
MTHFD1-212ENST00000555858 NOTCH2Q04721 2471 aa1.26□□□□□ -2.21
MTHFD1-212ENST00000555858 CNOT1A5YKK6 2376 aaKnown RBP1.26□□□□□ -2.21
MTHFD1-212ENST00000555858 H3BUA1 57 aa1.26□□□□□ -2.21
MTHFD1-212ENST00000555858 K7EIL1 84 aa1.26□□□□□ -2.21
MTHFD1-212ENST00000555858 KRTAP5-9P26371 169 aa1.26□□□□□ -2.21
MTHFD1-212ENST00000555858 KRTAP12-1P59990 96 aa1.26□□□□□ -2.21
MTHFD1-212ENST00000555858 TOMM7Q9P0U1 55 aa1.26□□□□□ -2.21
MTHFD1-212ENST00000555858 SORL1Q92673 2214 aa1.25□□□□□ -2.21
MTHFD1-212ENST00000555858 KNL1Q8NG31 2342 aa1.25□□□□□ -2.21
MTHFD1-212ENST00000555858 URB1O60287 2271 aaKnown RBP1.25□□□□□ -2.21
MTHFD1-212ENST00000555858 OBSCNQ5VST9 7968 aa1.25□□□□□ -2.21
MTHFD1-212ENST00000555858 TPRP12270 2363 aaKnown RBP1.25□□□□□ -2.21
MTHFD1-212ENST00000555858 DOPEY2Q9Y3R5 2298 aa1.24□□□□□ -2.21
MTHFD1-212ENST00000555858 DEFB108AA8MXU0 73 aa1.24□□□□□ -2.21
MTHFD1-212ENST00000555858 KRTAP12-3P60328 96 aa1.24□□□□□ -2.21
MTHFD1-212ENST00000555858 CLPSL2Q6UWE3 100 aa1.24□□□□□ -2.21
MTHFD1-212ENST00000555858 GOLGB1Q14789 3259 aaKnown RBP1.24□□□□□ -2.21
MTHFD1-212ENST00000555858 AHCTF1Q8WYP5 2266 aa1.23□□□□□ -2.21
MTHFD1-212ENST00000555858 DEFB130BP0DP73 79 aa1.23□□□□□ -2.21
MTHFD1-212ENST00000555858 DEFB130AP0DP74 79 aa1.23□□□□□ -2.21
MTHFD1-212ENST00000555858 UTRNP46939 3433 aa1.23□□□□□ -2.21
MTHFD1-212ENST00000555858 ABCA1O95477 2261 aa1.23□□□□□ -2.21
MTHFD1-212ENST00000555858 ASXL3Q9C0F0 2248 aa1.23□□□□□ -2.21
MTHFD1-212ENST00000555858 J3QKU1 62 aa1.22□□□□□ -2.21
MTHFD1-212ENST00000555858 C10orf95Q9H7T3 257 aa1.22□□□□□ -2.21
MTHFD1-212ENST00000555858 CNTRLQ7Z7A1 2325 aa1.22□□□□□ -2.21
MTHFD1-212ENST00000555858 CACNA1BQ00975 2339 aa1.21□□□□□ -2.22
MTHFD1-212ENST00000555858 A8MTW9 85 aa1.21□□□□□ -2.22
MTHFD1-212ENST00000555858 SPRR1AP35321 89 aa1.21□□□□□ -2.22
MTHFD1-212ENST00000555858 COX14Q96I36 57 aa1.21□□□□□ -2.22
MTHFD1-212ENST00000555858 H0YGG7 62 aa1.2□□□□□ -2.22
MTHFD1-212ENST00000555858 LCE1CQ5T751 118 aa1.2□□□□□ -2.22
MTHFD1-212ENST00000555858 LCE1BQ5T7P3 118 aa1.2□□□□□ -2.22
MTHFD1-212ENST00000555858 Q5VSD8 79 aa1.2□□□□□ -2.22
MTHFD1-212ENST00000555858 TRIOBPQ9H2D6 2365 aa1.19□□□□□ -2.22
MTHFD1-212ENST00000555858 SPRR1BP22528 89 aa1.19□□□□□ -2.22
MTHFD1-212ENST00000555858 LELP1Q5T871 98 aa1.19□□□□□ -2.22
MTHFD1-212ENST00000555858 DEFB104AQ8WTQ1 72 aa1.19□□□□□ -2.22
MTHFD1-212ENST00000555858 FAM208BQ5VWN6 2430 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms