RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 IGKV3D-11A0A0A0MRZ8 115 aa1.82□□□□□ -2.12
SRP54-209ENST00000555746 IGHV3-15A0A0B4J1V0 119 aa1.82□□□□□ -2.12
SRP54-209ENST00000555746 MYMXA0A1B0GTQ4 84 aa1.82□□□□□ -2.12
SRP54-209ENST00000555746 C2orf70A6NJV1 201 aa1.82□□□□□ -2.12
SRP54-209ENST00000555746 CEBPZOSA8MTT3 80 aa1.82□□□□□ -2.12
SRP54-209ENST00000555746 IQCF6A8MYZ5 107 aa1.82□□□□□ -2.12
SRP54-209ENST00000555746 H3BVH4 76 aa1.82□□□□□ -2.12
SRP54-209ENST00000555746 H7C2G1 150 aa1.82□□□□□ -2.12
SRP54-209ENST00000555746 COX6CP09669 75 aa1.82□□□□□ -2.12
SRP54-209ENST00000555746 MGST1P10620 155 aaKnown RBP1.82□□□□□ -2.12
SRP54-209ENST00000555746 UBE2D3P61077 147 aa1.82□□□□□ -2.12
SRP54-209ENST00000555746 UBE2D2P62837 147 aa1.82□□□□□ -2.12
SRP54-209ENST00000555746 FAM27BQ5VT28 67 aa1.82□□□□□ -2.12
SRP54-209ENST00000555746 Q6ZQT0 140 aa1.82□□□□□ -2.12
SRP54-209ENST00000555746 ZNF818PQ6ZRF7 136 aa1.82□□□□□ -2.12
SRP54-209ENST00000555746 C20orf197Q8N268 126 aa1.82□□□□□ -2.12
SRP54-209ENST00000555746 LYPD1Q8N2G4 141 aa1.82□□□□□ -2.12
SRP54-209ENST00000555746 MIR7-3HGQ8N6C7 128 aa1.82□□□□□ -2.12
SRP54-209ENST00000555746 C1orf64Q8NEQ6 169 aa1.82□□□□□ -2.12
SRP54-209ENST00000555746 CIRBP-AS1Q8TBR5 109 aa1.82□□□□□ -2.12
SRP54-209ENST00000555746 LIMD2Q9BT23 127 aa1.82□□□□□ -2.12
SRP54-209ENST00000555746 S4R3C0 116 aa1.82□□□□□ -2.12
SRP54-209ENST00000555746 LRP2P98164 4655 aa1.82□□□□□ -2.12
SRP54-209ENST00000555746 DNAH2Q9P225 4427 aa1.82□□□□□ -2.12
SRP54-209ENST00000555746 TRBV25-1A0A075B6N4 114 aa1.81□□□□□ -2.12
SRP54-209ENST00000555746 F8WEM9 126 aa1.81□□□□□ -2.12
SRP54-209ENST00000555746 H3BPC8 53 aa1.81□□□□□ -2.12
SRP54-209ENST00000555746 KRTAP5-8O75690 187 aa1.81□□□□□ -2.12
SRP54-209ENST00000555746 PRH1P02810 166 aa1.81□□□□□ -2.12
SRP54-209ENST00000555746 CLPSP04118 112 aa1.81□□□□□ -2.12
SRP54-209ENST00000555746 EDDM3BP56851 147 aa1.81□□□□□ -2.12
SRP54-209ENST00000555746 PLGLAQ15195 96 aa1.81□□□□□ -2.12
SRP54-209ENST00000555746 Q6JHZ5 121 aa1.81□□□□□ -2.12
SRP54-209ENST00000555746 LYZL1Q6UWQ5 148 aa1.81□□□□□ -2.12
SRP54-209ENST00000555746 PPP1R1CQ8WVI7 109 aa1.81□□□□□ -2.12
SRP54-209ENST00000555746 NMES1Q9C002 83 aa1.81□□□□□ -2.12
SRP54-209ENST00000555746 PROK2Q9HC23 129 aa1.81□□□□□ -2.12
SRP54-209ENST00000555746 FAT1Q14517 4588 aa1.81□□□□□ -2.12
SRP54-209ENST00000555746 PKD1P98161 4303 aa1.8□□□□□ -2.12
SRP54-209ENST00000555746 IGKV1D-42A0A075B6H8 117 aa1.8□□□□□ -2.12
SRP54-209ENST00000555746 TRAV23DV6A0A075B6W5 121 aa1.8□□□□□ -2.12
SRP54-209ENST00000555746 IGLV3-32A0A0A0MS00 114 aa1.8□□□□□ -2.12
SRP54-209ENST00000555746 TRAV22A0A0B4J277 110 aa1.8□□□□□ -2.12
SRP54-209ENST00000555746 ZNF815PA8K554 130 aa1.8□□□□□ -2.12
SRP54-209ENST00000555746 E7EUB6 86 aa1.8□□□□□ -2.12
SRP54-209ENST00000555746 DEFA4P12838 97 aa1.8□□□□□ -2.12
SRP54-209ENST00000555746 MIFP14174 115 aa1.8□□□□□ -2.12
SRP54-209ENST00000555746 ZNF22P17026 224 aaPredicted RBP1.8□□□□□ -2.12
SRP54-209ENST00000555746 IFI27P40305 119 aaPredicted RBP1.8□□□□□ -2.12
SRP54-209ENST00000555746 ATXN8Q156A1 80 aa1.8□□□□□ -2.12
SRP54-209ENST00000555746 FAM229BQ4G0N7 80 aa1.8□□□□□ -2.12
SRP54-209ENST00000555746 SPANXN5Q5MJ07 72 aa1.8□□□□□ -2.12
SRP54-209ENST00000555746 ATP5EP2Q5VTU8 51 aa1.8□□□□□ -2.12
SRP54-209ENST00000555746 RPS27LQ71UM5 84 aaKnown RBP1.8□□□□□ -2.12
SRP54-209ENST00000555746 NDUFA11Q86Y39 141 aa1.8□□□□□ -2.12
SRP54-209ENST00000555746 TMEM254Q8TBM7 123 aa1.8□□□□□ -2.12
SRP54-209ENST00000555746 SMIM4Q8WVI0 70 aa1.8□□□□□ -2.12
SRP54-209ENST00000555746 IGKV1D-37A0A075B6S9 117 aa1.79□□□□□ -2.12
SRP54-209ENST00000555746 IGKV1OR2-108A0A075B7D4 117 aa1.79□□□□□ -2.12
SRP54-209ENST00000555746 A0A087WSZ3 146 aa1.79□□□□□ -2.12
SRP54-209ENST00000555746 TMSB15BA0A087X1C1 80 aa1.79□□□□□ -2.12
SRP54-209ENST00000555746 TMEM30CPA0ZSE6 113 aa1.79□□□□□ -2.12
SRP54-209ENST00000555746 SDHAF1A6NFY7 115 aa1.79□□□□□ -2.12
SRP54-209ENST00000555746 FAM223BA6NKX1 122 aa1.79□□□□□ -2.12
SRP54-209ENST00000555746 C17orf98A8MV24 154 aa1.79□□□□□ -2.12
SRP54-209ENST00000555746 LYNX1G3V0Z9 82 aa1.79□□□□□ -2.12
SRP54-209ENST00000555746 CHKB-CPT1BH3BT56 60 aa1.79□□□□□ -2.12
SRP54-209ENST00000555746 ERC2-IT1O76042 136 aa1.79□□□□□ -2.12
SRP54-209ENST00000555746 LEPROTL1O95214 131 aa1.79□□□□□ -2.12
SRP54-209ENST00000555746 BAALC-AS2P0C853 105 aa1.79□□□□□ -2.12
SRP54-209ENST00000555746 LYNX1P0DP58 116 aa1.79□□□□□ -2.12
SRP54-209ENST00000555746 C10orf128Q5T292 105 aa1.79□□□□□ -2.12
SRP54-209ENST00000555746 SFTA2Q6UW10 78 aa1.79□□□□□ -2.12
SRP54-209ENST00000555746 PP632Q6XCG6 107 aa1.79□□□□□ -2.12
SRP54-209ENST00000555746 SPANXA2-OT1Q8N9U9 137 aa1.79□□□□□ -2.12
SRP54-209ENST00000555746 DNAH17Q9UFH2 4485 aa1.79□□□□□ -2.12
SRP54-209ENST00000555746 VPS13BQ7Z7G8 4022 aa1.78□□□□□ -2.12
SRP54-209ENST00000555746 IGLV10-54A0A075B6I4 117 aa1.78□□□□□ -2.12
SRP54-209ENST00000555746 C11orf86A6NJI1 115 aa1.78□□□□□ -2.12
SRP54-209ENST00000555746 A8MUU9 505 aa1.78□□□□□ -2.12
SRP54-209ENST00000555746 TMEM14DPA8MWL7 114 aa1.78□□□□□ -2.12
SRP54-209ENST00000555746 MRPL33O75394 65 aaKnown RBP1.78□□□□□ -2.12
SRP54-209ENST00000555746 SSBP1Q04837 148 aaKnown RBP1.78□□□□□ -2.12
SRP54-209ENST00000555746 MIR22HGQ0VDD5 57 aa1.78□□□□□ -2.12
SRP54-209ENST00000555746 Q5VV11 94 aa1.78□□□□□ -2.12
SRP54-209ENST00000555746 ZCCHC23Q6ZST2 131 aa1.78□□□□□ -2.12
SRP54-209ENST00000555746 ZNF563Q8TA94 476 aa1.78□□□□□ -2.12
SRP54-209ENST00000555746 ABRACLQ9P1F3 81 aa1.78□□□□□ -2.12
SRP54-209ENST00000555746 C22orf24Q9Y442 160 aa1.78□□□□□ -2.12
SRP54-209ENST00000555746 PKHD1L1Q86WI1 4243 aa1.77□□□□□ -2.13
SRP54-209ENST00000555746 TRAV10A0A0B4J240 114 aa1.77□□□□□ -2.13
SRP54-209ENST00000555746 TRAV12-3A0A0B4J271 114 aa1.77□□□□□ -2.13
SRP54-209ENST00000555746 IGHV1-18A0A0C4DH31 117 aa1.77□□□□□ -2.13
SRP54-209ENST00000555746 TEX49A0A1B0GTD5 131 aa1.77□□□□□ -2.13
SRP54-209ENST00000555746 H3BQ85 93 aa1.77□□□□□ -2.13
SRP54-209ENST00000555746 IGHV3-53P01767 116 aa1.77□□□□□ -2.13
SRP54-209ENST00000555746 IGLV7-43P04211 117 aa1.77□□□□□ -2.13
SRP54-209ENST00000555746 C2orf82Q6UX34 121 aa1.77□□□□□ -2.13
SRP54-209ENST00000555746 CLECL1Q8IZS7 167 aa1.77□□□□□ -2.13
SRP54-209ENST00000555746 CMC2Q9NRP2 79 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms