RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 CORTO00230 105 aa-0.9□□□□□ -2.55
SRP54-207ENST00000555535 ZZEF1O43149 2961 aa-0.9□□□□□ -2.55
SRP54-207ENST00000555535 DLEU1O43261 78 aa-0.9□□□□□ -2.55
SRP54-207ENST00000555535 WDR87Q6ZQQ6 2873 aa-0.9□□□□□ -2.55
SRP54-207ENST00000555535 PKD1L2Q7Z442 2459 aa-0.9□□□□□ -2.55
SRP54-207ENST00000555535 ABCC5O15440 1437 aa-0.9□□□□□ -2.55
SRP54-207ENST00000555535 RGPD8O14715 1765 aaPredicted RBP-0.91□□□□□ -2.55
SRP54-207ENST00000555535 RGPD5Q99666 1765 aa-0.91□□□□□ -2.55
SRP54-207ENST00000555535 AKAP13Q12802 2813 aa-0.91□□□□□ -2.55
SRP54-207ENST00000555535 H3BQ15 152 aa-0.91□□□□□ -2.56
SRP54-207ENST00000555535 NDUFA3O95167 84 aa-0.91□□□□□ -2.56
SRP54-207ENST00000555535 IGLC2P0DOY2 106 aa-0.91□□□□□ -2.56
SRP54-207ENST00000555535 IGLC3P0DOY3 106 aa-0.91□□□□□ -2.56
SRP54-207ENST00000555535 NMSQ5H8A3 153 aa-0.91□□□□□ -2.56
SRP54-207ENST00000555535 PMCHL2Q9BQD1 86 aa-0.91□□□□□ -2.56
SRP54-207ENST00000555535 DMXL1Q9Y485 3027 aa-0.91□□□□□ -2.56
SRP54-207ENST00000555535 MTORP42345 2549 aa-0.91□□□□□ -2.56
SRP54-207ENST00000555535 RGPD1P0DJD0 1748 aa-0.92□□□□□ -2.56
SRP54-207ENST00000555535 FAM186AA6NE01 2351 aa-0.92□□□□□ -2.56
SRP54-207ENST00000555535 D6R8Y8 96 aa-0.92□□□□□ -2.56
SRP54-207ENST00000555535 LEPROTL1O95214 131 aa-0.92□□□□□ -2.56
SRP54-207ENST00000555535 MUSTN1Q8IVN3 82 aa-0.92□□□□□ -2.56
SRP54-207ENST00000555535 TRGV9Q99603 122 aa-0.92□□□□□ -2.56
SRP54-207ENST00000555535 TRANK1O15050 2925 aa-0.93□□□□□ -2.56
SRP54-207ENST00000555535 LAMA1P25391 3075 aa-0.93□□□□□ -2.56
SRP54-207ENST00000555535 ETDBQ3ZM63 59 aa-0.93□□□□□ -2.56
SRP54-207ENST00000555535 NRXN1Q9ULB1 1477 aa-0.93□□□□□ -2.56
SRP54-207ENST00000555535 RAPGEF2Q9Y4G8 1499 aa-0.93□□□□□ -2.56
SRP54-207ENST00000555535 LTN1O94822 1766 aa-0.93□□□□□ -2.56
SRP54-207ENST00000555535 LRRK2Q5S007 2527 aa-0.93□□□□□ -2.56
SRP54-207ENST00000555535 ANK3Q12955 4377 aaKnown RBP-0.94□□□□□ -2.56
SRP54-207ENST00000555535 ABCC2Q92887 1545 aa-0.94□□□□□ -2.56
SRP54-207ENST00000555535 LRRC7Q96NW7 1537 aa-0.94□□□□□ -2.56
SRP54-207ENST00000555535 C9orf92A6NGG3 77 aa-0.94□□□□□ -2.56
SRP54-207ENST00000555535 F8WEM9 126 aa-0.94□□□□□ -2.56
SRP54-207ENST00000555535 H7BZZ5 65 aa-0.94□□□□□ -2.56
SRP54-207ENST00000555535 NDUFC1O43677 76 aa-0.94□□□□□ -2.56
SRP54-207ENST00000555535 COX7BP24311 80 aa-0.94□□□□□ -2.56
SRP54-207ENST00000555535 COL5A1-AS1Q5SY13 56 aa-0.95□□□□□ -2.56
SRP54-207ENST00000555535 ZNF720Q7Z2F6 126 aa-0.95□□□□□ -2.56
SRP54-207ENST00000555535 MAGI2Q86UL8 1455 aa-0.95□□□□□ -2.56
SRP54-207ENST00000555535 POLR1AO95602 1720 aaPredicted RBP-0.95□□□□□ -2.56
SRP54-207ENST00000555535 GCN1Q92616 2671 aaKnown RBP-0.96□□□□□ -2.56
SRP54-207ENST00000555535 LRRC9Q6ZRR7 1453 aa-0.96□□□□□ -2.56
SRP54-207ENST00000555535 RPL38P63173 70 aaKnown RBP-0.96□□□□□ -2.56
SRP54-207ENST00000555535 MRPS10P82664 201 aaKnown RBP-0.96□□□□□ -2.56
SRP54-207ENST00000555535 S4R3F8 94 aa-0.96□□□□□ -2.56
SRP54-207ENST00000555535 DNHD1Q96M86 4753 aa-0.96□□□□□ -2.56
SRP54-207ENST00000555535 A0A0C4DFX4 3053 aa-0.96□□□□□ -2.56
SRP54-207ENST00000555535 RIF1Q5UIP0 2472 aaKnown RBP-0.96□□□□□ -2.56
SRP54-207ENST00000555535 ANKRD36BQ8N2N9 1353 aa-0.96□□□□□ -2.56
SRP54-207ENST00000555535 MGAM2Q2M2H8 2515 aa-0.96□□□□□ -2.56
SRP54-207ENST00000555535 UBR1Q8IWV7 1749 aa-0.97□□□□□ -2.56
SRP54-207ENST00000555535 DNAH11Q96DT5 4516 aa-0.97□□□□□ -2.56
SRP54-207ENST00000555535 ATOX1O00244 68 aa-0.97□□□□□ -2.56
SRP54-207ENST00000555535 MT-ATP8P03928 68 aa-0.97□□□□□ -2.56
SRP54-207ENST00000555535 FAUP35544 74 aaKnown RBP-0.97□□□□□ -2.56
SRP54-207ENST00000555535 S100A10P60903 97 aa-0.97□□□□□ -2.56
SRP54-207ENST00000555535 DEFA5Q01523 94 aa-0.97□□□□□ -2.56
SRP54-207ENST00000555535 ANKRD11Q6UB99 2663 aaPredicted RBP-0.97□□□□□ -2.57
SRP54-207ENST00000555535 NESP48681 1621 aa-0.97□□□□□ -2.57
SRP54-207ENST00000555535 USP32Q8NFA0 1604 aa-0.97□□□□□ -2.57
SRP54-207ENST00000555535 PLECQ15149 4684 aaKnown RBP-0.97□□□□□ -2.57
SRP54-207ENST00000555535 ANKRD36CQ5JPF3 1778 aa-0.98□□□□□ -2.57
SRP54-207ENST00000555535 PRDM15P57071 1507 aaPredicted RBP-0.98□□□□□ -2.57
SRP54-207ENST00000555535 DNAH2Q9P225 4427 aa-0.98□□□□□ -2.57
SRP54-207ENST00000555535 UQCRHLA0A096LP55 91 aa-0.98□□□□□ -2.57
SRP54-207ENST00000555535 C20orf202A1L168 122 aa-0.98□□□□□ -2.57
SRP54-207ENST00000555535 LINC00587B1AMM8 73 aa-0.98□□□□□ -2.57
SRP54-207ENST00000555535 MPC2O95563 127 aa-0.98□□□□□ -2.57
SRP54-207ENST00000555535 DEFB110Q30KQ9 67 aa-0.98□□□□□ -2.57
SRP54-207ENST00000555535 SERP2Q8N6R1 65 aa-0.98□□□□□ -2.57
SRP54-207ENST00000555535 GAFA1Q96PS6 74 aa-0.98□□□□□ -2.57
SRP54-207ENST00000555535 DOT1LQ8TEK3 1739 aa-0.98□□□□□ -2.57
SRP54-207ENST00000555535 IQCF6A8MYZ5 107 aa-0.99□□□□□ -2.57
SRP54-207ENST00000555535 ITPR1Q14643 2758 aa-0.99□□□□□ -2.57
SRP54-207ENST00000555535 MAP3K1Q13233 1512 aa-0.99□□□□□ -2.57
SRP54-207ENST00000555535 ZFYVE16Q7Z3T8 1539 aa-0.99□□□□□ -2.57
SRP54-207ENST00000555535 COL12A1Q99715 3063 aa-1□□□□□ -2.57
SRP54-207ENST00000555535 EFCAB10A6NFE3 127 aa-1□□□□□ -2.57
SRP54-207ENST00000555535 LINC00158P58513 81 aa-1□□□□□ -2.57
SRP54-207ENST00000555535 HMGN3Q15651 99 aa-1□□□□□ -2.57
SRP54-207ENST00000555535 ALKAL2Q6UX46 152 aa-1□□□□□ -2.57
SRP54-207ENST00000555535 COX6B2Q6YFQ2 88 aa-1□□□□□ -2.57
SRP54-207ENST00000555535 C2orf88Q9BSF0 95 aa-1□□□□□ -2.57
SRP54-207ENST00000555535 PRO3102Q9H379 93 aa-1□□□□□ -2.57
SRP54-207ENST00000555535 UBE2D4Q9Y2X8 147 aa-1□□□□□ -2.57
SRP54-207ENST00000555535 ACACBO00763 2458 aa-1□□□□□ -2.57
SRP54-207ENST00000555535 KALRNO60229 2985 aa-1.01□□□□□ -2.57
SRP54-207ENST00000555535 DDX60LQ5H9U9 1706 aaKnown RBP-1.01□□□□□ -2.57
SRP54-207ENST00000555535 CEP290O15078 2479 aa-1.01□□□□□ -2.57
SRP54-207ENST00000555535 LAMA3Q16787 3333 aa-1.02□□□□□ -2.57
SRP54-207ENST00000555535 PLXNC1O60486 1568 aa-1.02□□□□□ -2.57
SRP54-207ENST00000555535 AKAP12Q02952 1782 aa-1.02□□□□□ -2.57
SRP54-207ENST00000555535 NWD1Q149M9 1564 aa-1.02□□□□□ -2.57
SRP54-207ENST00000555535 WFDC9Q8NEX5 89 aa-1.02□□□□□ -2.57
SRP54-207ENST00000555535 FYCO1Q9BQS8 1478 aa-1.02□□□□□ -2.57
SRP54-207ENST00000555535 NBEAL2Q6ZNJ1 2754 aa-1.02□□□□□ -2.57
SRP54-207ENST00000555535 A0A1B0GUT8 65 aa-1.03□□□□□ -2.57
SRP54-207ENST00000555535 CELSR3Q9NYQ7 3312 aa-1.03□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 174.6 ms