RNA–Protein interactions for RNA: ENST00000555379.1

LINC00641-201, long intergenic non-protein coding RNA 641, humanhuman

Gene LINC00641, Length 5,425 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-201ENST00000555379 IGLV7-43P04211 117 aa5.55□□□□□ -1.52
LINC00641-201ENST00000555379 MRPL34Q9BQ48 92 aaKnown RBP5.55□□□□□ -1.52
LINC00641-201ENST00000555379 MYO9AB2RTY4 2548 aa5.55□□□□□ -1.52
LINC00641-201ENST00000555379 LUZP6Q538Z0 58 aa5.55□□□□□ -1.52
LINC00641-201ENST00000555379 ZNF462Q96JM2 2506 aa5.55□□□□□ -1.52
LINC00641-201ENST00000555379 IGKV2D-30A0A075B6S6 120 aa5.54□□□□□ -1.52
LINC00641-201ENST00000555379 IGKV2-30P06310 120 aa5.54□□□□□ -1.52
LINC00641-201ENST00000555379 C15orf56Q8N910 161 aa5.54□□□□□ -1.52
LINC00641-201ENST00000555379 DSCAML1Q8TD84 2053 aa5.54□□□□□ -1.52
LINC00641-201ENST00000555379 KRTAP10-3P60369 221 aa5.54□□□□□ -1.52
LINC00641-201ENST00000555379 GIG44P09565 113 aaPredicted RBP5.54□□□□□ -1.52
LINC00641-201ENST00000555379 KRTAP21-3Q3LHN1 58 aa5.53□□□□□ -1.52
LINC00641-201ENST00000555379 ANKRD11Q6UB99 2663 aaPredicted RBP5.53□□□□□ -1.52
LINC00641-201ENST00000555379 KRTAP16-1A8MUX0 517 aa5.53□□□□□ -1.52
LINC00641-201ENST00000555379 LITAFQ99732 161 aa5.52□□□□□ -1.53
LINC00641-201ENST00000555379 ABCA12Q86UK0 2595 aa5.51□□□□□ -1.53
LINC00641-201ENST00000555379 Q96NJ1 140 aa5.5□□□□□ -1.53
LINC00641-201ENST00000555379 PIEZO2Q9H5I5 2752 aa5.5□□□□□ -1.53
LINC00641-201ENST00000555379 A0A1B0GVX0 72 aa5.49□□□□□ -1.53
LINC00641-201ENST00000555379 MUC4Q99102 2169 aa5.49□□□□□ -1.53
LINC00641-201ENST00000555379 SPRR4Q96PI1 79 aa5.49□□□□□ -1.53
LINC00641-201ENST00000555379 COX6B2Q6YFQ2 88 aa5.49□□□□□ -1.53
LINC00641-201ENST00000555379 IGLV8-61A0A075B6I0 122 aa5.48□□□□□ -1.53
LINC00641-201ENST00000555379 ANKRD17O75179 2603 aaKnown RBP5.48□□□□□ -1.53
LINC00641-201ENST00000555379 PRAC1Q96KF2 57 aa5.47□□□□□ -1.53
LINC00641-201ENST00000555379 LINC01558Q9Y6Z2 57 aa5.47□□□□□ -1.53
LINC00641-201ENST00000555379 C8orf17Q9NRJ1 99 aa5.47□□□□□ -1.53
LINC00641-201ENST00000555379 ZFYVE26Q68DK2 2539 aa5.47□□□□□ -1.53
LINC00641-201ENST00000555379 USP9XQ93008 2570 aaPredicted RBP5.47□□□□□ -1.53
LINC00641-201ENST00000555379 CHTF8P0CG12 524 aa5.46□□□□□ -1.54
LINC00641-201ENST00000555379 SEC61BP60468 96 aaKnown RBP5.46□□□□□ -1.54
LINC00641-201ENST00000555379 Q5VV11 94 aa5.46□□□□□ -1.54
LINC00641-201ENST00000555379 CASC10Q5T4H9 136 aa5.45□□□□□ -1.54
LINC00641-201ENST00000555379 K7EQZ3 153 aa5.45□□□□□ -1.54
LINC00641-201ENST00000555379 PKD1L2Q7Z442 2459 aa5.45□□□□□ -1.54
LINC00641-201ENST00000555379 PRR26Q8N8Z3 221 aa5.44□□□□□ -1.54
LINC00641-201ENST00000555379 OBSCN-AS1Q96MR7 158 aa5.44□□□□□ -1.54
LINC00641-201ENST00000555379 IGFL1Q6UW32 110 aa5.44□□□□□ -1.54
LINC00641-201ENST00000555379 C9orf129Q5T035 196 aaKnown RBP5.44□□□□□ -1.54
LINC00641-201ENST00000555379 JMJD1CQ15652 2540 aa5.44□□□□□ -1.54
LINC00641-201ENST00000555379 CSAG1Q6PB30 78 aa5.44□□□□□ -1.54
LINC00641-201ENST00000555379 OXTP01178 125 aa5.43□□□□□ -1.54
LINC00641-201ENST00000555379 Q8N9P0 234 aaPredicted RBP5.42□□□□□ -1.54
LINC00641-201ENST00000555379 CHD8Q9HCK8 2581 aa5.42□□□□□ -1.54
LINC00641-201ENST00000555379 FN1P02751 2386 aaKnown RBP5.42□□□□□ -1.54
LINC00641-201ENST00000555379 PLAC8Q9NZF1 115 aa5.42□□□□□ -1.54
LINC00641-201ENST00000555379 OCR1Q9BZK8 76 aa5.42□□□□□ -1.54
LINC00641-201ENST00000555379 C2CD3Q4AC94 2353 aa5.41□□□□□ -1.54
LINC00641-201ENST00000555379 CEP295Q9C0D2 2601 aa5.4□□□□□ -1.54
LINC00641-201ENST00000555379 LCE6AA0A183 80 aa5.4□□□□□ -1.54
LINC00641-201ENST00000555379 F8P00451 2351 aa5.4□□□□□ -1.55
LINC00641-201ENST00000555379 IGLV5-48A0A075B6I7 105 aa5.4□□□□□ -1.55
LINC00641-201ENST00000555379 Q8N377 158 aa5.39□□□□□ -1.55
LINC00641-201ENST00000555379 FAM168BA1KXE4 195 aa5.38□□□□□ -1.55
LINC00641-201ENST00000555379 CAMK2N1Q7Z7J9 78 aa5.38□□□□□ -1.55
LINC00641-201ENST00000555379 FAM104AQ969W3 186 aa5.38□□□□□ -1.55
LINC00641-201ENST00000555379 CYSTM1Q9H1C7 97 aa5.37□□□□□ -1.55
LINC00641-201ENST00000555379 USP9YO00507 2555 aaPredicted RBP5.37□□□□□ -1.55
LINC00641-201ENST00000555379 IGLV7-46A0A075B6I9 117 aa5.37□□□□□ -1.55
LINC00641-201ENST00000555379 SPTBN4Q9H254 2564 aa5.35□□□□□ -1.55
LINC00641-201ENST00000555379 SPRR1BP22528 89 aa5.35□□□□□ -1.55
LINC00641-201ENST00000555379 A0A1W2PNN7 141 aa5.34□□□□□ -1.55
LINC00641-201ENST00000555379 TLN2Q9Y4G6 2542 aa5.34□□□□□ -1.55
LINC00641-201ENST00000555379 A6NN06 94 aa5.33□□□□□ -1.56
LINC00641-201ENST00000555379 Q6ZSA8 131 aa5.33□□□□□ -1.56
LINC00641-201ENST00000555379 TNP2Q05952 138 aa5.33□□□□□ -1.56
LINC00641-201ENST00000555379 FASNP49327 2511 aaKnown RBP5.32□□□□□ -1.56
LINC00641-201ENST00000555379 DSCR10P59022 87 aa5.32□□□□□ -1.56
LINC00641-201ENST00000555379 SPRR1AP35321 89 aa5.3□□□□□ -1.56
LINC00641-201ENST00000555379 MTORP42345 2549 aa5.3□□□□□ -1.56
LINC00641-201ENST00000555379 A0A087X002 238 aa5.3□□□□□ -1.56
LINC00641-201ENST00000555379 HRES1P13985 223 aa5.28□□□□□ -1.56
LINC00641-201ENST00000555379 SPINK7P58062 85 aa5.27□□□□□ -1.57
LINC00641-201ENST00000555379 SMR3BP02814 79 aaPredicted RBP5.27□□□□□ -1.57
LINC00641-201ENST00000555379 RPS29P62273 56 aaKnown RBP5.26□□□□□ -1.57
LINC00641-201ENST00000555379 CR1P17927 2039 aa5.25□□□□□ -1.57
LINC00641-201ENST00000555379 A0A1W2PNM2 257 aa5.25□□□□□ -1.57
LINC00641-201ENST00000555379 LINC00483Q53H64 154 aa5.25□□□□□ -1.57
LINC00641-201ENST00000555379 C9orf92A6NGG3 77 aa5.22□□□□□ -1.57
LINC00641-201ENST00000555379 EPG5Q9HCE0 2579 aa5.22□□□□□ -1.57
LINC00641-201ENST00000555379 A0A1B0GU33 70 aa5.22□□□□□ -1.57
LINC00641-201ENST00000555379 ZCCHC13Q8WW36 166 aaKnown RBP5.21□□□□□ -1.58
LINC00641-201ENST00000555379 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.21□□□□□ -1.58
LINC00641-201ENST00000555379 EP400Q96L91 3159 aa5.2□□□□□ -1.58
LINC00641-201ENST00000555379 Q6ZR54 194 aa5.2□□□□□ -1.58
LINC00641-201ENST00000555379 ROMO1P60602 79 aa5.2□□□□□ -1.58
LINC00641-201ENST00000555379 KRTAP25-1Q3LHN0 102 aa5.19□□□□□ -1.58
LINC00641-201ENST00000555379 Q5VSD8 79 aa5.18□□□□□ -1.58
LINC00641-201ENST00000555379 GOLGB1Q14789 3259 aaKnown RBP5.18□□□□□ -1.58
LINC00641-201ENST00000555379 ACANP16112 2415 aa5.17□□□□□ -1.58
LINC00641-201ENST00000555379 KRTAP26-1Q6PEX3 210 aa5.14□□□□□ -1.59
LINC00641-201ENST00000555379 SPATA8Q6RVD6 105 aa5.14□□□□□ -1.59
LINC00641-201ENST00000555379 A0A0D9SG42 100 aa5.13□□□□□ -1.59
LINC00641-201ENST00000555379 NDUFAF8A1L188 74 aa5.1□□□□□ -1.59
LINC00641-201ENST00000555379 S4R3F8 94 aa5.1□□□□□ -1.59
LINC00641-201ENST00000555379 POLQO75417 2590 aa5.1□□□□□ -1.59
LINC00641-201ENST00000555379 UTRNP46939 3433 aa5.1□□□□□ -1.59
LINC00641-201ENST00000555379 ANAPC11Q9NYG5 84 aa5.1□□□□□ -1.59
LINC00641-201ENST00000555379 MMP24-AS1A0A0U1RRL7 71 aa5.1□□□□□ -1.59
LINC00641-201ENST00000555379 M0R2T5 61 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms