RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	C22orf24	Q9Y442	160 aa		2.85	□□□□□ -1.95
PSMC6-208	ENST00000554956	TRBV30	A0A0K0K1B3	111 aa		2.84	□□□□□ -1.95
PSMC6-208	ENST00000554956	UBE2D1	P51668	147 aa		2.84	□□□□□ -1.95
PSMC6-208	ENST00000554956	MP68	P56378	58 aa		2.84	□□□□□ -1.95
PSMC6-208	ENST00000554956	KRTAP13-2	Q52LG2	175 aa		2.84	□□□□□ -1.95
PSMC6-208	ENST00000554956	TGIF2-C20orf24	A0A0A6YYL0	155 aa		2.83	□□□□□ -1.96
PSMC6-208	ENST00000554956	LINC00614	P0C842	121 aa		2.83	□□□□□ -1.96
PSMC6-208	ENST00000554956	S100A2	P29034	98 aa		2.83	□□□□□ -1.96
PSMC6-208	ENST00000554956	TMEM136	Q6ZRR5	245 aa		2.83	□□□□□ -1.96
PSMC6-208	ENST00000554956	AKAP14	Q86UN6	197 aa		2.83	□□□□□ -1.96
PSMC6-208	ENST00000554956	AMELX	Q99217	191 aa		2.83	□□□□□ -1.96
PSMC6-208	ENST00000554956	RETNLB	Q9BQ08	111 aa		2.83	□□□□□ -1.96
PSMC6-208	ENST00000554956	NAT8	Q9UHE5	227 aa		2.83	□□□□□ -1.96
PSMC6-208	ENST00000554956	CARHSP1	Q9Y2V2	147 aa	Known RBP	2.83	□□□□□ -1.96
PSMC6-208	ENST00000554956	IGIP	A6NJ69	53 aa		2.82	□□□□□ -1.96
PSMC6-208	ENST00000554956	S100A1	P23297	94 aa		2.82	□□□□□ -1.96
PSMC6-208	ENST00000554956	IFI27	P40305	119 aa	Predicted RBP	2.82	□□□□□ -1.96
PSMC6-208	ENST00000554956	LINC00483	Q53H64	154 aa		2.82	□□□□□ -1.96
PSMC6-208	ENST00000554956	SCGB1D4	Q6XE38	83 aa		2.82	□□□□□ -1.96
PSMC6-208	ENST00000554956	KRTAP13-1	Q8IUC0	172 aa		2.82	□□□□□ -1.96
PSMC6-208	ENST00000554956	TMEM141	Q96I45	108 aa		2.82	□□□□□ -1.96
PSMC6-208	ENST00000554956	PRELID3A	Q96N28	172 aa		2.82	□□□□□ -1.96
PSMC6-208	ENST00000554956	TOMM7	Q9P0U1	55 aa		2.82	□□□□□ -1.96
PSMC6-208	ENST00000554956	CDKN2A-AS1	Q9UH64	79 aa		2.82	□□□□□ -1.96
PSMC6-208	ENST00000554956	FAT4	Q6V0I7	4981 aa		2.82	□□□□□ -1.96
PSMC6-208	ENST00000554956	BCE1	O60756	84 aa		2.81	□□□□□ -1.96
PSMC6-208	ENST00000554956	PPBP	P02775	128 aa		2.81	□□□□□ -1.96
PSMC6-208	ENST00000554956	KRTAP10-10	P60014	251 aa		2.81	□□□□□ -1.96
PSMC6-208	ENST00000554956	COMMD7	Q86VX2	200 aa		2.81	□□□□□ -1.96
PSMC6-208	ENST00000554956	MIR7-3HG	Q8N6C7	128 aa		2.81	□□□□□ -1.96
PSMC6-208	ENST00000554956	SPANXA2-OT1	Q8N9U9	137 aa		2.81	□□□□□ -1.96
PSMC6-208	ENST00000554956		F8W036	122 aa		2.8	□□□□□ -1.96
PSMC6-208	ENST00000554956	NUPR1	O60356	82 aa		2.8	□□□□□ -1.96
PSMC6-208	ENST00000554956	CRYGA	P11844	174 aa		2.8	□□□□□ -1.96
PSMC6-208	ENST00000554956	ADCYAP1	P18509	176 aa		2.8	□□□□□ -1.96
PSMC6-208	ENST00000554956	CKS1B	P61024	79 aa		2.8	□□□□□ -1.96
PSMC6-208	ENST00000554956		Q8IZM0	81 aa		2.8	□□□□□ -1.96
PSMC6-208	ENST00000554956		Q8N8P6	123 aa		2.8	□□□□□ -1.96
PSMC6-208	ENST00000554956		Q8NDZ9	215 aa		2.8	□□□□□ -1.96
PSMC6-208	ENST00000554956	KRTAP4-1	Q9BYQ7	146 aa		2.8	□□□□□ -1.96
PSMC6-208	ENST00000554956	MUC17	Q685J3	4493 aa		2.8	□□□□□ -1.96
PSMC6-208	ENST00000554956	IGKV2-28	A0A075B6P5	120 aa		2.79	□□□□□ -1.96
PSMC6-208	ENST00000554956		F8VRH5	84 aa		2.79	□□□□□ -1.96
PSMC6-208	ENST00000554956	IGKV2D-28	P01615	120 aa		2.79	□□□□□ -1.96
PSMC6-208	ENST00000554956	PEA15	Q15121	130 aa		2.79	□□□□□ -1.96
PSMC6-208	ENST00000554956	NDUFA5	Q16718	116 aa		2.79	□□□□□ -1.96
PSMC6-208	ENST00000554956	TP73-AS1	Q9UF72	201 aa		2.79	□□□□□ -1.96
PSMC6-208	ENST00000554956	CYSLTR1	Q9Y271	337 aa		2.79	□□□□□ -1.96
PSMC6-208	ENST00000554956	TMEM238	C9JI98	176 aa		2.78	□□□□□ -1.96
PSMC6-208	ENST00000554956	S100A8	P05109	93 aa		2.78	□□□□□ -1.96
PSMC6-208	ENST00000554956	RPL28	P46779	137 aa	Known RBP	2.78	□□□□□ -1.96
PSMC6-208	ENST00000554956	RAB5B	P61020	215 aa		2.78	□□□□□ -1.96
PSMC6-208	ENST00000554956	PRLH	P81277	87 aa		2.78	□□□□□ -1.96
PSMC6-208	ENST00000554956	C1orf195	Q5TG92	126 aa		2.78	□□□□□ -1.96
PSMC6-208	ENST00000554956	ATP5L2	Q7Z4Y8	100 aa		2.78	□□□□□ -1.96
PSMC6-208	ENST00000554956	C3orf22	Q8N5N4	141 aa		2.78	□□□□□ -1.96
PSMC6-208	ENST00000554956	C2orf88	Q9BSF0	95 aa		2.78	□□□□□ -1.96
PSMC6-208	ENST00000554956	SPRR5	A0A1B0GTR4	108 aa		2.77	□□□□□ -1.97
PSMC6-208	ENST00000554956	LOC105371267	A0A1B0GV96	52 aa		2.77	□□□□□ -1.97
PSMC6-208	ENST00000554956		K7ERS5	55 aa		2.77	□□□□□ -1.97
PSMC6-208	ENST00000554956	SPINK8	P0C7L1	97 aa		2.77	□□□□□ -1.97
PSMC6-208	ENST00000554956	HERVK_113	P63121	156 aa		2.77	□□□□□ -1.97
PSMC6-208	ENST00000554956	TPRXL	Q17RH7	258 aa		2.77	□□□□□ -1.97
PSMC6-208	ENST00000554956	LINC00304	Q8N9R0	145 aa		2.77	□□□□□ -1.97
PSMC6-208	ENST00000554956	COX7B2	Q8TF08	81 aa		2.77	□□□□□ -1.97
PSMC6-208	ENST00000554956	TOMM6	Q96B49	74 aa		2.77	□□□□□ -1.97
PSMC6-208	ENST00000554956	LAMTOR2	Q9Y2Q5	125 aa		2.77	□□□□□ -1.97
PSMC6-208	ENST00000554956		M0R378	163 aa		2.76	□□□□□ -1.97
PSMC6-208	ENST00000554956	FAM229B	Q4G0N7	80 aa		2.76	□□□□□ -1.97
PSMC6-208	ENST00000554956	PLEKHB2	Q96CS7	222 aa		2.76	□□□□□ -1.97
PSMC6-208	ENST00000554956	SCGB3A1	Q96QR1	104 aa		2.76	□□□□□ -1.97
PSMC6-208	ENST00000554956	CST9L	Q9H4G1	147 aa		2.76	□□□□□ -1.97
PSMC6-208	ENST00000554956	NXT2	Q9NPJ8	142 aa	Known RBP	2.76	□□□□□ -1.97
PSMC6-208	ENST00000554956	LINC01546	A6NGU7	62 aa		2.75	□□□□□ -1.97
PSMC6-208	ENST00000554956	SLC25A34	Q6PIV7	304 aa		2.75	□□□□□ -1.97
PSMC6-208	ENST00000554956	TMEM126A	Q9H061	195 aa		2.75	□□□□□ -1.97
PSMC6-208	ENST00000554956	IGKV2D-26	A0A0A0MRZ7	120 aa		2.74	□□□□□ -1.97
PSMC6-208	ENST00000554956		K7EMI3	77 aa		2.74	□□□□□ -1.97
PSMC6-208	ENST00000554956	MT-ND4L	P03901	98 aa		2.74	□□□□□ -1.97
PSMC6-208	ENST00000554956	ZNF22	P17026	224 aa	Predicted RBP	2.74	□□□□□ -1.97
PSMC6-208	ENST00000554956	SEC11A	P67812	179 aa		2.74	□□□□□ -1.97
PSMC6-208	ENST00000554956	DAND5	Q8N907	189 aa		2.74	□□□□□ -1.97
PSMC6-208	ENST00000554956	ST20-AS1	Q8NBB2	130 aa		2.74	□□□□□ -1.97
PSMC6-208	ENST00000554956	ZNF625	Q96I27	306 aa	Predicted RBP	2.74	□□□□□ -1.97
PSMC6-208	ENST00000554956	GNB1L	Q9BYB4	327 aa		2.74	□□□□□ -1.97
PSMC6-208	ENST00000554956	IGLC3	P0DOY3	106 aa		2.73	□□□□□ -1.97
PSMC6-208	ENST00000554956	RAB14	P61106	215 aa		2.73	□□□□□ -1.97
PSMC6-208	ENST00000554956	SPRR4	Q96PI1	79 aa		2.73	□□□□□ -1.97
PSMC6-208	ENST00000554956	JOSD1	Q15040	202 aa	Predicted RBP	2.72	□□□□□ -1.97
PSMC6-208	ENST00000554956	KRTAP19-2	Q3LHN2	52 aa		2.72	□□□□□ -1.97
PSMC6-208	ENST00000554956	ASB16-AS1	Q495Z4	193 aa		2.72	□□□□□ -1.97
PSMC6-208	ENST00000554956	HIGD2A	Q9BW72	106 aa		2.72	□□□□□ -1.97
PSMC6-208	ENST00000554956	ERG28	Q9UKR5	140 aa		2.72	□□□□□ -1.97
PSMC6-208	ENST00000554956	C11orf86	A6NJI1	115 aa		2.71	□□□□□ -1.98
PSMC6-208	ENST00000554956		A8MWP4	228 aa		2.71	□□□□□ -1.98
PSMC6-208	ENST00000554956	DDT	P30046	118 aa		2.71	□□□□□ -1.98
PSMC6-208	ENST00000554956	PMCHL1	Q16048	86 aa		2.71	□□□□□ -1.98
PSMC6-208	ENST00000554956	ADM2	Q7Z4H4	148 aa		2.71	□□□□□ -1.98
PSMC6-208	ENST00000554956	CRCT1	Q9UGL9	99 aa		2.71	□□□□□ -1.98
PSMC6-208	ENST00000554956		A6NED7	52 aa		2.7	□□□□□ -1.98

Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms