RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 AKR1D1P51857 326 aa7.36□□□□□ -1.23
SYNE2-214ENST00000554928 LINC00308Q8TCZ7 52 aa7.36□□□□□ -1.23
SYNE2-214ENST00000554928 KRTAP4-16G5E9R7 235 aaPredicted RBP7.35□□□□□ -1.23
SYNE2-214ENST00000554928 TIMM17BO60830 172 aa7.35□□□□□ -1.23
SYNE2-214ENST00000554928 SPRR1AP35321 89 aa7.35□□□□□ -1.23
SYNE2-214ENST00000554928 LINC00518Q8N0U6 118 aa7.35□□□□□ -1.23
SYNE2-214ENST00000554928 MIEN1Q9BRT3 115 aa7.35□□□□□ -1.23
SYNE2-214ENST00000554928 KCNQ1DNQ9H478 68 aa7.35□□□□□ -1.23
SYNE2-214ENST00000554928 A0A087X002 238 aa7.34□□□□□ -1.23
SYNE2-214ENST00000554928 PRYO14603 147 aa7.34□□□□□ -1.23
SYNE2-214ENST00000554928 NDUFC2O95298 119 aa7.34□□□□□ -1.23
SYNE2-214ENST00000554928 DDTP30046 118 aa7.34□□□□□ -1.23
SYNE2-214ENST00000554928 SPANXB1Q9NS25 103 aaPredicted RBP7.34□□□□□ -1.23
SYNE2-214ENST00000554928 TRBV10-2A0A0K0K1G8 114 aa7.33□□□□□ -1.24
SYNE2-214ENST00000554928 IGLV6-57P01721 117 aa7.32□□□□□ -1.24
SYNE2-214ENST00000554928 SCGB1D4Q6XE38 83 aa7.32□□□□□ -1.24
SYNE2-214ENST00000554928 HIGD2AQ9BW72 106 aa7.32□□□□□ -1.24
SYNE2-214ENST00000554928 PCP4L1A6NKN8 68 aa7.31□□□□□ -1.24
SYNE2-214ENST00000554928 SCGB1D1O95968 90 aa7.31□□□□□ -1.24
SYNE2-214ENST00000554928 LINC00337Q8N6G1 96 aa7.31□□□□□ -1.24
SYNE2-214ENST00000554928 SPANXDQ9BXN6 97 aa7.31□□□□□ -1.24
SYNE2-214ENST00000554928 SPANXCQ9NY87 97 aa7.31□□□□□ -1.24
SYNE2-214ENST00000554928 B5MCH6 92 aa7.3□□□□□ -1.24
SYNE2-214ENST00000554928 KRTAP13-2Q52LG2 175 aa7.3□□□□□ -1.24
SYNE2-214ENST00000554928 SMCR5Q8TEV8 140 aa7.3□□□□□ -1.24
SYNE2-214ENST00000554928 C12orf57Q99622 126 aa7.3□□□□□ -1.24
SYNE2-214ENST00000554928 ETDCA0A1B0GVM5 59 aa7.29□□□□□ -1.24
SYNE2-214ENST00000554928 ERC2-IT1O76042 136 aa7.29□□□□□ -1.24
SYNE2-214ENST00000554928 S100A12P80511 92 aa7.29□□□□□ -1.24
SYNE2-214ENST00000554928 S100A7L2Q5SY68 101 aa7.29□□□□□ -1.24
SYNE2-214ENST00000554928 MUSTN1Q8IVN3 82 aa7.28□□□□□ -1.24
SYNE2-214ENST00000554928 Q9BRP9 147 aa7.28□□□□□ -1.24
SYNE2-214ENST00000554928 LRP2P98164 4655 aa7.27□□□□□ -1.25
SYNE2-214ENST00000554928 TRAV23DV6A0A075B6W5 121 aa7.27□□□□□ -1.25
SYNE2-214ENST00000554928 HSBP1L1C9JCN9 74 aa7.27□□□□□ -1.25
SYNE2-214ENST00000554928 UBR4Q5T4S7 5183 aa7.26□□□□□ -1.25
SYNE2-214ENST00000554928 SMIM6P0DI80 62 aa7.26□□□□□ -1.25
SYNE2-214ENST00000554928 CRYGAP11844 174 aa7.26□□□□□ -1.25
SYNE2-214ENST00000554928 OR13C6PQ8NH95 151 aa7.26□□□□□ -1.25
SYNE2-214ENST00000554928 SPRR4Q96PI1 79 aa7.26□□□□□ -1.25
SYNE2-214ENST00000554928 C3orf22Q8N5N4 141 aa7.25□□□□□ -1.25
SYNE2-214ENST00000554928 ZNF73O43830 326 aaPredicted RBP7.24□□□□□ -1.25
SYNE2-214ENST00000554928 RPL13AP40429 203 aaKnown RBP7.24□□□□□ -1.25
SYNE2-214ENST00000554928 LCE1DQ5T752 114 aa7.24□□□□□ -1.25
SYNE2-214ENST00000554928 Q6ZRX8 168 aa7.24□□□□□ -1.25
SYNE2-214ENST00000554928 PPDPFQ9H3Y8 114 aa7.24□□□□□ -1.25
SYNE2-214ENST00000554928 LPAP08519 4548 aa7.23□□□□□ -1.25
SYNE2-214ENST00000554928 IFITM1P13164 125 aa7.23□□□□□ -1.25
SYNE2-214ENST00000554928 FAM229BQ4G0N7 80 aa7.23□□□□□ -1.25
SYNE2-214ENST00000554928 TYMSOSQ8TAI1 123 aa7.23□□□□□ -1.25
SYNE2-214ENST00000554928 PAM16Q9Y3D7 125 aa7.23□□□□□ -1.25
SYNE2-214ENST00000554928 TMEM238LA0A1B0GVL6 79 aa7.22□□□□□ -1.25
SYNE2-214ENST00000554928 COX8AP10176 69 aa7.22□□□□□ -1.25
SYNE2-214ENST00000554928 JOSD1Q15040 202 aaPredicted RBP7.22□□□□□ -1.25
SYNE2-214ENST00000554928 Q6ZVH6 145 aa7.22□□□□□ -1.25
SYNE2-214ENST00000554928 C14orf144Q96I85 54 aa7.22□□□□□ -1.25
SYNE2-214ENST00000554928 TSPAN13O95857 204 aa7.21□□□□□ -1.26
SYNE2-214ENST00000554928 SPATA45Q537H7 98 aa7.21□□□□□ -1.26
SYNE2-214ENST00000554928 ST20-AS1Q8NBB2 130 aa7.21□□□□□ -1.26
SYNE2-214ENST00000554928 C6orf99Q4VX62 202 aa7.2□□□□□ -1.26
SYNE2-214ENST00000554928 PYY3Q5JQD4 70 aa7.2□□□□□ -1.26
SYNE2-214ENST00000554928 GAGE2AQ6NT46 116 aa7.2□□□□□ -1.26
SYNE2-214ENST00000554928 A6NDN8 102 aa7.19□□□□□ -1.26
SYNE2-214ENST00000554928 CTAG1AP78358 180 aa7.19□□□□□ -1.26
SYNE2-214ENST00000554928 A4D1N5 150 aa7.18□□□□□ -1.26
SYNE2-214ENST00000554928 LINC00483Q53H64 154 aa7.18□□□□□ -1.26
SYNE2-214ENST00000554928 VAMP8Q9BV40 100 aa7.18□□□□□ -1.26
SYNE2-214ENST00000554928 ZNF706Q9Y5V0 76 aaPredicted RBP7.18□□□□□ -1.26
SYNE2-214ENST00000554928 DLEU1O43261 78 aa7.17□□□□□ -1.26
SYNE2-214ENST00000554928 C2orf91Q6ZV80 131 aa7.17□□□□□ -1.26
SYNE2-214ENST00000554928 COPS9Q8WXC6 57 aa7.17□□□□□ -1.26
SYNE2-214ENST00000554928 KRTAP4-7Q9BYR0 210 aa7.17□□□□□ -1.26
SYNE2-214ENST00000554928 COX7BP24311 80 aa7.16□□□□□ -1.26
SYNE2-214ENST00000554928 ELOF1P60002 83 aaKnown RBP7.16□□□□□ -1.26
SYNE2-214ENST00000554928 SMIM11BQ8TCY0 68 aa7.16□□□□□ -1.26
SYNE2-214ENST00000554928 LINC00304Q8N9R0 145 aa7.15□□□□□ -1.26
SYNE2-214ENST00000554928 HIST1H4GQ99525 98 aa7.15□□□□□ -1.26
SYNE2-214ENST00000554928 CBY1Q9Y3M2 126 aa7.14□□□□□ -1.27
SYNE2-214ENST00000554928 IGLV9-49A0A0B4J1Y8 123 aa7.13□□□□□ -1.27
SYNE2-214ENST00000554928 TRAV13-2A0A0B4J235 113 aa7.13□□□□□ -1.27
SYNE2-214ENST00000554928 HINT1P49773 126 aaPredicted RBP7.13□□□□□ -1.27
SYNE2-214ENST00000554928 SLC25A34Q6PIV7 304 aa7.13□□□□□ -1.27
SYNE2-214ENST00000554928 MOBPQ13875 183 aa7.12□□□□□ -1.27
SYNE2-214ENST00000554928 Q8NBF4 154 aa7.12□□□□□ -1.27
SYNE2-214ENST00000554928 RETNLBQ9BQ08 111 aa7.12□□□□□ -1.27
SYNE2-214ENST00000554928 HIGD1BQ9P298 99 aa7.12□□□□□ -1.27
SYNE2-214ENST00000554928 DHRS4-AS1Q9P1J3 65 aa7.11□□□□□ -1.27
SYNE2-214ENST00000554928 TRBV7-6A0A0J9YX20 115 aa7.1□□□□□ -1.27
SYNE2-214ENST00000554928 A0A1B0GWB2 263 aa7.1□□□□□ -1.27
SYNE2-214ENST00000554928 PRR4Q16378 134 aa7.1□□□□□ -1.27
SYNE2-214ENST00000554928 CFC1BP0CG36 223 aa7.09□□□□□ -1.27
SYNE2-214ENST00000554928 CFC1P0CG37 223 aa7.09□□□□□ -1.27
SYNE2-214ENST00000554928 SPRR1BP22528 89 aa7.09□□□□□ -1.27
SYNE2-214ENST00000554928 LINC01547P58512 204 aaPredicted RBP7.09□□□□□ -1.27
SYNE2-214ENST00000554928 KRTAP19-4Q3LI73 84 aa7.08□□□□□ -1.28
SYNE2-214ENST00000554928 DEFB105AQ8NG35 78 aa7.08□□□□□ -1.28
SYNE2-214ENST00000554928 RNF213Q63HN8 5207 aa7.07□□□□□ -1.28
SYNE2-214ENST00000554928 TSTD3H0UI37 97 aa7.07□□□□□ -1.28
SYNE2-214ENST00000554928 FXYD2P54710 66 aa7.07□□□□□ -1.28
SYNE2-214ENST00000554928 H7C2G1 150 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms