RNA–Protein interactions for RNA: ENST00000554707.1

PCNX1-208, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-208ENST00000554707 ACACAQ13085 2346 aa-1.56□□□□□ -2.66
PCNX1-208ENST00000554707 SMG1Q96Q15 3661 aaKnown RBP-1.56□□□□□ -2.66
PCNX1-208ENST00000554707 IGLC2P0DOY2 106 aa-1.56□□□□□ -2.66
PCNX1-208ENST00000554707 IGLC3P0DOY3 106 aa-1.56□□□□□ -2.66
PCNX1-208ENST00000554707 NMSQ5H8A3 153 aa-1.56□□□□□ -2.66
PCNX1-208ENST00000554707 SRCAPQ6ZRS2 3230 aa-1.56□□□□□ -2.66
PCNX1-208ENST00000554707 MLH3Q9UHC1 1453 aa-1.56□□□□□ -2.66
PCNX1-208ENST00000554707 PKD1L2Q7Z442 2459 aa-1.57□□□□□ -2.66
PCNX1-208ENST00000554707 APOBP04114 4563 aaKnown RBP-1.57□□□□□ -2.66
PCNX1-208ENST00000554707 DNAH7Q8WXX0 4024 aa-1.57□□□□□ -2.66
PCNX1-208ENST00000554707 H7BZZ5 65 aa-1.57□□□□□ -2.66
PCNX1-208ENST00000554707 DNAH1Q9P2D7 4330 aa-1.57□□□□□ -2.66
PCNX1-208ENST00000554707 SPHKAPQ2M3C7 1700 aa-1.57□□□□□ -2.66
PCNX1-208ENST00000554707 D6R8Y8 96 aa-1.58□□□□□ -2.66
PCNX1-208ENST00000554707 LEPROTL1O95214 131 aa-1.58□□□□□ -2.66
PCNX1-208ENST00000554707 MUSTN1Q8IVN3 82 aa-1.58□□□□□ -2.66
PCNX1-208ENST00000554707 PMCHL2Q9BQD1 86 aa-1.58□□□□□ -2.66
PCNX1-208ENST00000554707 DMXL1Q9Y485 3027 aa-1.59□□□□□ -2.66
PCNX1-208ENST00000554707 NBEAQ8NFP9 2946 aa-1.59□□□□□ -2.66
PCNX1-208ENST00000554707 COL14A1Q05707 1796 aaKnown RBP-1.59□□□□□ -2.66
PCNX1-208ENST00000554707 SAMD9Q5K651 1589 aa-1.59□□□□□ -2.66
PCNX1-208ENST00000554707 A0A0C4DFX4 3053 aa-1.6□□□□□ -2.66
PCNX1-208ENST00000554707 CEP295Q9C0D2 2601 aa-1.6□□□□□ -2.67
PCNX1-208ENST00000554707 EYSQ5T1H1 3165 aa-1.6□□□□□ -2.67
PCNX1-208ENST00000554707 CHD7Q9P2D1 2997 aa-1.6□□□□□ -2.67
PCNX1-208ENST00000554707 NDUFA3O95167 84 aa-1.6□□□□□ -2.67
PCNX1-208ENST00000554707 MPC2O95563 127 aa-1.6□□□□□ -2.67
PCNX1-208ENST00000554707 MT1XP80297 61 aa-1.6□□□□□ -2.67
PCNX1-208ENST00000554707 C2orf88Q9BSF0 95 aa-1.6□□□□□ -2.67
PCNX1-208ENST00000554707 SACSQ9NZJ4 4579 aa-1.6□□□□□ -2.67
PCNX1-208ENST00000554707 C20orf202A1L168 122 aa-1.61□□□□□ -2.67
PCNX1-208ENST00000554707 ANKRD36A6QL64 1941 aa-1.62□□□□□ -2.67
PCNX1-208ENST00000554707 KIAA1551Q9HCM1 1747 aa-1.62□□□□□ -2.67
PCNX1-208ENST00000554707 CSMD1Q96PZ7 3565 aa-1.62□□□□□ -2.67
PCNX1-208ENST00000554707 LINC00587B1AMM8 73 aa-1.62□□□□□ -2.67
PCNX1-208ENST00000554707 ETDBQ3ZM63 59 aa-1.62□□□□□ -2.67
PCNX1-208ENST00000554707 UTP20O75691 2785 aaKnown RBP-1.63□□□□□ -2.67
PCNX1-208ENST00000554707 C9orf92A6NGG3 77 aa-1.63□□□□□ -2.67
PCNX1-208ENST00000554707 ZNF720Q7Z2F6 126 aa-1.63□□□□□ -2.67
PCNX1-208ENST00000554707 RAPGEF2Q9Y4G8 1499 aa-1.63□□□□□ -2.67
PCNX1-208ENST00000554707 TOPAZ1Q8N9V7 1692 aa-1.64□□□□□ -2.67
PCNX1-208ENST00000554707 DNAH11Q96DT5 4516 aa-1.64□□□□□ -2.67
PCNX1-208ENST00000554707 F8WEM9 126 aa-1.64□□□□□ -2.67
PCNX1-208ENST00000554707 ATOX1O00244 68 aa-1.64□□□□□ -2.67
PCNX1-208ENST00000554707 MT-ATP8P03928 68 aa-1.64□□□□□ -2.67
PCNX1-208ENST00000554707 COX7BP24311 80 aa-1.64□□□□□ -2.67
PCNX1-208ENST00000554707 HMGN3Q15651 99 aa-1.64□□□□□ -2.67
PCNX1-208ENST00000554707 KRTAP19-6Q3LI70 58 aa-1.64□□□□□ -2.67
PCNX1-208ENST00000554707 COL5A1-AS1Q5SY13 56 aa-1.64□□□□□ -2.67
PCNX1-208ENST00000554707 ALKAL2Q6UX46 152 aa-1.64□□□□□ -2.67
PCNX1-208ENST00000554707 SERP2Q8N6R1 65 aa-1.64□□□□□ -2.67
PCNX1-208ENST00000554707 CHD1O14646 1710 aa-1.64□□□□□ -2.67
PCNX1-208ENST00000554707 MON2Q7Z3U7 1717 aa-1.64□□□□□ -2.67
PCNX1-208ENST00000554707 NRXN1Q9ULB1 1477 aa-1.64□□□□□ -2.67
PCNX1-208ENST00000554707 EIF4G3O43432 1585 aaKnown RBP-1.64□□□□□ -2.67
PCNX1-208ENST00000554707 SHPRHQ149N8 1683 aa-1.64□□□□□ -2.67
PCNX1-208ENST00000554707 ANKRD50Q9ULJ7 1429 aa-1.65□□□□□ -2.67
PCNX1-208ENST00000554707 MT1BP07438 61 aa-1.65□□□□□ -2.67
PCNX1-208ENST00000554707 CFAP46Q8IYW2 2715 aa-1.65□□□□□ -2.67
PCNX1-208ENST00000554707 BCORQ6W2J9 1755 aa-1.65□□□□□ -2.67
PCNX1-208ENST00000554707 KALRNO60229 2985 aa-1.65□□□□□ -2.67
PCNX1-208ENST00000554707 ABCC2Q92887 1545 aa-1.66□□□□□ -2.67
PCNX1-208ENST00000554707 C5P01031 1676 aa-1.66□□□□□ -2.68
PCNX1-208ENST00000554707 ANKRD36BQ8N2N9 1353 aa-1.66□□□□□ -2.68
PCNX1-208ENST00000554707 H0YAA0 97 aa-1.66□□□□□ -2.68
PCNX1-208ENST00000554707 PDE4DIPQ5VU43 2346 aa-1.66□□□□□ -2.68
PCNX1-208ENST00000554707 ZZEF1O43149 2961 aa-1.66□□□□□ -2.68
PCNX1-208ENST00000554707 MAGI2Q86UL8 1455 aa-1.67□□□□□ -2.68
PCNX1-208ENST00000554707 UQCRHLA0A096LP55 91 aa-1.67□□□□□ -2.68
PCNX1-208ENST00000554707 FAUP35544 74 aaKnown RBP-1.67□□□□□ -2.68
PCNX1-208ENST00000554707 S100A10P60903 97 aa-1.67□□□□□ -2.68
PCNX1-208ENST00000554707 RPL38P63173 70 aaKnown RBP-1.67□□□□□ -2.68
PCNX1-208ENST00000554707 COX6B2Q6YFQ2 88 aa-1.67□□□□□ -2.68
PCNX1-208ENST00000554707 PRDM15P57071 1507 aaPredicted RBP-1.67□□□□□ -2.68
PCNX1-208ENST00000554707 FAM135AQ9P2D6 1515 aa-1.67□□□□□ -2.68
PCNX1-208ENST00000554707 SPENQ96T58 3664 aaKnown RBP-1.68□□□□□ -2.68
PCNX1-208ENST00000554707 ACACBO00763 2458 aa-1.69□□□□□ -2.68
PCNX1-208ENST00000554707 DEFB1P60022 68 aa-1.7□□□□□ -2.68
PCNX1-208ENST00000554707 ABCA3Q99758 1704 aa-1.71□□□□□ -2.68
PCNX1-208ENST00000554707 K7EP34 96 aa-1.71□□□□□ -2.68
PCNX1-208ENST00000554707 GAFA1Q96PS6 74 aa-1.71□□□□□ -2.68
PCNX1-208ENST00000554707 MT1MQ8N339 61 aa-1.72□□□□□ -2.68
PCNX1-208ENST00000554707 UBE2D4Q9Y2X8 147 aa-1.72□□□□□ -2.68
PCNX1-208ENST00000554707 KIF20BQ96Q89 1820 aa-1.73□□□□□ -2.69
PCNX1-208ENST00000554707 ZFHX4Q86UP3 3567 aa-1.73□□□□□ -2.69
PCNX1-208ENST00000554707 FRYQ5TBA9 3013 aa-1.73□□□□□ -2.69
PCNX1-208ENST00000554707 IQCF6A8MYZ5 107 aa-1.73□□□□□ -2.69
PCNX1-208ENST00000554707 DNAH5Q8TE73 4624 aa-1.73□□□□□ -2.69
PCNX1-208ENST00000554707 MT2AP02795 61 aa-1.74□□□□□ -2.69
PCNX1-208ENST00000554707 TRIOO75962 3097 aa-1.74□□□□□ -2.69
PCNX1-208ENST00000554707 MYO9AB2RTY4 2548 aa-1.74□□□□□ -2.69
PCNX1-208ENST00000554707 UBR3Q6ZT12 1888 aa-1.75□□□□□ -2.69
PCNX1-208ENST00000554707 LINC00032P0C843 101 aa-1.75□□□□□ -2.69
PCNX1-208ENST00000554707 S4R3F8 94 aa-1.75□□□□□ -2.69
PCNX1-208ENST00000554707 PREX1Q8TCU6 1659 aa-1.75□□□□□ -2.69
PCNX1-208ENST00000554707 LRRC9Q6ZRR7 1453 aa-1.75□□□□□ -2.69
PCNX1-208ENST00000554707 A0A1B0GUT8 65 aa-1.76□□□□□ -2.69
PCNX1-208ENST00000554707 MT1GP13640 62 aa-1.76□□□□□ -2.69
PCNX1-208ENST00000554707 PRO3102Q9H379 93 aa-1.76□□□□□ -2.69
PCNX1-208ENST00000554707 ZFYVE16Q7Z3T8 1539 aa-1.76□□□□□ -2.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms