RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 SPANXCQ9NY87 97 aa5.19□□□□□ -1.58
ACTN1-213ENST00000554508 DLEU1O43261 78 aa5.18□□□□□ -1.58
ACTN1-213ENST00000554508 NDUFC2O95298 119 aa5.18□□□□□ -1.58
ACTN1-213ENST00000554508 CRYGAP11844 174 aa5.18□□□□□ -1.58
ACTN1-213ENST00000554508 Q6ZVH6 145 aa5.18□□□□□ -1.58
ACTN1-213ENST00000554508 COPS9Q8WXC6 57 aa5.18□□□□□ -1.58
ACTN1-213ENST00000554508 SPANXB1Q9NS25 103 aaPredicted RBP5.18□□□□□ -1.58
ACTN1-213ENST00000554508 LPAP08519 4548 aa5.17□□□□□ -1.58
ACTN1-213ENST00000554508 IFITM1P13164 125 aa5.17□□□□□ -1.58
ACTN1-213ENST00000554508 S100A7L2Q5SY68 101 aa5.17□□□□□ -1.58
ACTN1-213ENST00000554508 MUSTN1Q8IVN3 82 aa5.17□□□□□ -1.58
ACTN1-213ENST00000554508 TMEM126AQ9H061 195 aa5.17□□□□□ -1.58
ACTN1-213ENST00000554508 A0A087X002 238 aa5.16□□□□□ -1.58
ACTN1-213ENST00000554508 TRBV10-2A0A0K0K1G8 114 aa5.16□□□□□ -1.58
ACTN1-213ENST00000554508 FAM229BQ4G0N7 80 aa5.16□□□□□ -1.58
ACTN1-213ENST00000554508 FAM19A1Q7Z5A9 133 aa5.16□□□□□ -1.58
ACTN1-213ENST00000554508 TYMSOSQ8TAI1 123 aa5.16□□□□□ -1.58
ACTN1-213ENST00000554508 HIST1H4GQ99525 98 aa5.16□□□□□ -1.58
ACTN1-213ENST00000554508 TRBV10-3A0A0K0K1G6 114 aa5.15□□□□□ -1.59
ACTN1-213ENST00000554508 M0R143 59 aa5.15□□□□□ -1.59
ACTN1-213ENST00000554508 OR13C6PQ8NH95 151 aa5.15□□□□□ -1.59
ACTN1-213ENST00000554508 CTAG1AP78358 180 aa5.14□□□□□ -1.59
ACTN1-213ENST00000554508 PRLHP81277 87 aa5.14□□□□□ -1.59
ACTN1-213ENST00000554508 BATFQ16520 125 aa5.14□□□□□ -1.59
ACTN1-213ENST00000554508 HIGD1BQ9P298 99 aa5.14□□□□□ -1.59
ACTN1-213ENST00000554508 TMEM238LA0A1B0GVL6 79 aa5.13□□□□□ -1.59
ACTN1-213ENST00000554508 A6NJY4 79 aa5.13□□□□□ -1.59
ACTN1-213ENST00000554508 PRYO14603 147 aa5.13□□□□□ -1.59
ACTN1-213ENST00000554508 HSD52Q0P140 79 aa5.13□□□□□ -1.59
ACTN1-213ENST00000554508 C2orf91Q6ZV80 131 aa5.13□□□□□ -1.59
ACTN1-213ENST00000554508 PPDPFQ9H3Y8 114 aa5.13□□□□□ -1.59
ACTN1-213ENST00000554508 ANAPC11Q9NYG5 84 aa5.13□□□□□ -1.59
ACTN1-213ENST00000554508 A4D1N5 150 aa5.12□□□□□ -1.59
ACTN1-213ENST00000554508 A6NDN8 102 aa5.12□□□□□ -1.59
ACTN1-213ENST00000554508 TSPAN13O95857 204 aa5.12□□□□□ -1.59
ACTN1-213ENST00000554508 IGLV6-57P01721 117 aa5.12□□□□□ -1.59
ACTN1-213ENST00000554508 PRR4Q16378 134 aa5.12□□□□□ -1.59
ACTN1-213ENST00000554508 TAL2Q16559 108 aa5.12□□□□□ -1.59
ACTN1-213ENST00000554508 KRTAP13-2Q52LG2 175 aa5.12□□□□□ -1.59
ACTN1-213ENST00000554508 LINC00337Q8N6G1 96 aa5.12□□□□□ -1.59
ACTN1-213ENST00000554508 KCNQ1DNQ9H478 68 aa5.12□□□□□ -1.59
ACTN1-213ENST00000554508 TRAV23DV6A0A075B6W5 121 aa5.11□□□□□ -1.59
ACTN1-213ENST00000554508 ETDCA0A1B0GVM5 59 aa5.11□□□□□ -1.59
ACTN1-213ENST00000554508 HINT1P49773 126 aaPredicted RBP5.11□□□□□ -1.59
ACTN1-213ENST00000554508 HIGD2AQ9BW72 106 aa5.11□□□□□ -1.59
ACTN1-213ENST00000554508 CBY1Q9Y3M2 126 aa5.11□□□□□ -1.59
ACTN1-213ENST00000554508 TRAV13-2A0A0B4J235 113 aa5.1□□□□□ -1.59
ACTN1-213ENST00000554508 SPRR1AP35321 89 aa5.1□□□□□ -1.59
ACTN1-213ENST00000554508 CEND1Q8N111 149 aa5.1□□□□□ -1.59
ACTN1-213ENST00000554508 LINC00304Q8N9R0 145 aa5.1□□□□□ -1.59
ACTN1-213ENST00000554508 ZNF706Q9Y5V0 76 aaPredicted RBP5.1□□□□□ -1.59
ACTN1-213ENST00000554508 ZNF73O43830 326 aaPredicted RBP5.09□□□□□ -1.59
ACTN1-213ENST00000554508 KRTAP4-16G5E9R7 235 aaPredicted RBP5.08□□□□□ -1.6
ACTN1-213ENST00000554508 RAB37Q96AX2 223 aa5.08□□□□□ -1.6
ACTN1-213ENST00000554508 SPRR4Q96PI1 79 aa5.08□□□□□ -1.6
ACTN1-213ENST00000554508 B5MCH6 92 aa5.07□□□□□ -1.6
ACTN1-213ENST00000554508 SMCR5Q8TEV8 140 aa5.07□□□□□ -1.6
ACTN1-213ENST00000554508 CFC1BP0CG36 223 aa5.06□□□□□ -1.6
ACTN1-213ENST00000554508 CFC1P0CG37 223 aa5.06□□□□□ -1.6
ACTN1-213ENST00000554508 C6orf99Q4VX62 202 aa5.06□□□□□ -1.6
ACTN1-213ENST00000554508 COL5A1-AS1Q5SY13 56 aa5.06□□□□□ -1.6
ACTN1-213ENST00000554508 BVES-AS1Q5T3Y7 98 aa5.06□□□□□ -1.6
ACTN1-213ENST00000554508 SPAG11AQ6PDA7 123 aa5.06□□□□□ -1.6
ACTN1-213ENST00000554508 Q6ZRX8 168 aa5.06□□□□□ -1.6
ACTN1-213ENST00000554508 C3orf22Q8N5N4 141 aa5.06□□□□□ -1.6
ACTN1-213ENST00000554508 SMIM11BQ8TCY0 68 aa5.06□□□□□ -1.6
ACTN1-213ENST00000554508 NHP2Q9NX24 153 aaKnown RBP5.06□□□□□ -1.6
ACTN1-213ENST00000554508 RNF213Q63HN8 5207 aa5.05□□□□□ -1.6
ACTN1-213ENST00000554508 H7C2G1 150 aa5.05□□□□□ -1.6
ACTN1-213ENST00000554508 COX7BP24311 80 aa5.05□□□□□ -1.6
ACTN1-213ENST00000554508 FXYD2P54710 66 aa5.05□□□□□ -1.6
ACTN1-213ENST00000554508 Q1RN00 199 aa5.05□□□□□ -1.6
ACTN1-213ENST00000554508 A0A0B4J2C4 111 aa5.04□□□□□ -1.6
ACTN1-213ENST00000554508 C4orf48Q5BLP8 95 aa5.04□□□□□ -1.6
ACTN1-213ENST00000554508 SNHG12Q9BXW3 62 aa5.04□□□□□ -1.6
ACTN1-213ENST00000554508 TRBV7-6A0A0J9YX20 115 aa5.03□□□□□ -1.6
ACTN1-213ENST00000554508 ELOF1P60002 83 aaKnown RBP5.03□□□□□ -1.6
ACTN1-213ENST00000554508 VAMP3Q15836 100 aa5.03□□□□□ -1.6
ACTN1-213ENST00000554508 LINC00483Q53H64 154 aa5.03□□□□□ -1.6
ACTN1-213ENST00000554508 Q9BRP9 147 aa5.03□□□□□ -1.6
ACTN1-213ENST00000554508 PRO1854Q9UHT4 67 aa5.03□□□□□ -1.6
ACTN1-213ENST00000554508 MUC17Q685J3 4493 aa5.02□□□□□ -1.61
ACTN1-213ENST00000554508 A0A1B0GWB2 263 aa5.02□□□□□ -1.61
ACTN1-213ENST00000554508 K7ERJ3 54 aa5.02□□□□□ -1.61
ACTN1-213ENST00000554508 GAGE2AQ6NT46 116 aa5.02□□□□□ -1.61
ACTN1-213ENST00000554508 RETNLBQ9BQ08 111 aa5.02□□□□□ -1.61
ACTN1-213ENST00000554508 DHRS4-AS1Q9P1J3 65 aa5.02□□□□□ -1.61
ACTN1-213ENST00000554508 IGLV7-46A0A075B6I9 117 aa5.01□□□□□ -1.61
ACTN1-213ENST00000554508 ERC2-IT1O76042 136 aa5.01□□□□□ -1.61
ACTN1-213ENST00000554508 PSMB2P49721 201 aa5.01□□□□□ -1.61
ACTN1-213ENST00000554508 LYRM7Q5U5X0 104 aa5.01□□□□□ -1.61
ACTN1-213ENST00000554508 SSBP3-AS1Q7Z2R9 100 aa5.01□□□□□ -1.61
ACTN1-213ENST00000554508 Q8NBF4 154 aa5.01□□□□□ -1.61
ACTN1-213ENST00000554508 SPINK1P00995 79 aa5□□□□□ -1.61
ACTN1-213ENST00000554508 TPRXLQ17RH7 258 aa5□□□□□ -1.61
ACTN1-213ENST00000554508 SLC25A20O43772 301 aa4.99□□□□□ -1.61
ACTN1-213ENST00000554508 COX6CP09669 75 aa4.99□□□□□ -1.61
ACTN1-213ENST00000554508 SCGB1C2P0DMR2 95 aa4.99□□□□□ -1.61
ACTN1-213ENST00000554508 FP248Q71RG6 208 aaPredicted RBP4.99□□□□□ -1.61
ACTN1-213ENST00000554508 ST20-AS1Q8NBB2 130 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms