RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 PKD1P98161 4303 aa4.81□□□□□ -1.64
TDP1-209ENST00000554180 TRBV20-1A0A075B6N2 111 aa4.8□□□□□ -1.64
TDP1-209ENST00000554180 SCGB1C2P0DMR2 95 aa4.8□□□□□ -1.64
TDP1-209ENST00000554180 SPRR1AP35321 89 aa4.8□□□□□ -1.64
TDP1-209ENST00000554180 VAMP3Q15836 100 aa4.8□□□□□ -1.64
TDP1-209ENST00000554180 C6orf99Q4VX62 202 aa4.8□□□□□ -1.64
TDP1-209ENST00000554180 PKHD1P08F94 4074 aa4.8□□□□□ -1.64
TDP1-209ENST00000554180 DNAH5Q8TE73 4624 aa4.79□□□□□ -1.64
TDP1-209ENST00000554180 RPL37AP8A6NKH3 93 aa4.79□□□□□ -1.64
TDP1-209ENST00000554180 ELOF1P60002 83 aaKnown RBP4.79□□□□□ -1.64
TDP1-209ENST00000554180 UBE2BP63146 152 aa4.79□□□□□ -1.64
TDP1-209ENST00000554180 REG3GQ6UW15 175 aa4.79□□□□□ -1.64
TDP1-209ENST00000554180 PHF5AQ7RTV0 110 aaKnown RBP4.79□□□□□ -1.64
TDP1-209ENST00000554180 CIRBP-AS1Q8TBR5 109 aa4.79□□□□□ -1.64
TDP1-209ENST00000554180 FAM30AQ9NZY2 134 aa4.79□□□□□ -1.64
TDP1-209ENST00000554180 A0A1B0GX51 115 aa4.78□□□□□ -1.64
TDP1-209ENST00000554180 KRTAP4-16G5E9R7 235 aaPredicted RBP4.78□□□□□ -1.64
TDP1-209ENST00000554180 COX7BP24311 80 aa4.78□□□□□ -1.64
TDP1-209ENST00000554180 GTF2H5Q6ZYL4 71 aa4.78□□□□□ -1.64
TDP1-209ENST00000554180 SCXQ7RTU7 201 aa4.78□□□□□ -1.64
TDP1-209ENST00000554180 SPCS1Q9Y6A9 102 aa4.78□□□□□ -1.64
TDP1-209ENST00000554180 A0A1B0GV90 55 aa4.77□□□□□ -1.65
TDP1-209ENST00000554180 K7EP34 96 aa4.77□□□□□ -1.65
TDP1-209ENST00000554180 LST1O00453 97 aa4.77□□□□□ -1.65
TDP1-209ENST00000554180 SNCGO76070 127 aa4.77□□□□□ -1.65
TDP1-209ENST00000554180 TCL1BO95988 128 aa4.77□□□□□ -1.65
TDP1-209ENST00000554180 ATXN8Q156A1 80 aa4.77□□□□□ -1.65
TDP1-209ENST00000554180 Q6ZRX8 168 aa4.77□□□□□ -1.65
TDP1-209ENST00000554180 ETDCA0A1B0GVM5 59 aa4.76□□□□□ -1.65
TDP1-209ENST00000554180 H0Y9J4 135 aa4.76□□□□□ -1.65
TDP1-209ENST00000554180 SLC25A20O43772 301 aa4.76□□□□□ -1.65
TDP1-209ENST00000554180 TRACP01848 142 aa4.76□□□□□ -1.65
TDP1-209ENST00000554180 INAFM2P0DMQ5 153 aa4.76□□□□□ -1.65
TDP1-209ENST00000554180 LINC00528Q8N1L1 170 aa4.76□□□□□ -1.65
TDP1-209ENST00000554180 CLEC2BQ92478 149 aa4.76□□□□□ -1.65
TDP1-209ENST00000554180 RYR3Q15413 4870 aa4.76□□□□□ -1.65
TDP1-209ENST00000554180 B5MCH6 92 aa4.75□□□□□ -1.65
TDP1-209ENST00000554180 BCE1O60756 84 aa4.75□□□□□ -1.65
TDP1-209ENST00000554180 LINC00575Q6W349 94 aa4.75□□□□□ -1.65
TDP1-209ENST00000554180 KRTAP11-1Q8IUC1 163 aa4.75□□□□□ -1.65
TDP1-209ENST00000554180 FAM218AQ96MZ4 157 aa4.75□□□□□ -1.65
TDP1-209ENST00000554180 DHRS4-AS1Q9P1J3 65 aa4.75□□□□□ -1.65
TDP1-209ENST00000554180 DNAH8Q96JB1 4490 aa4.74□□□□□ -1.65
TDP1-209ENST00000554180 DNAL4O96015 105 aa4.74□□□□□ -1.65
TDP1-209ENST00000554180 LRP1BQ9NZR2 4599 aa4.74□□□□□ -1.65
TDP1-209ENST00000554180 hADV29S1A0JD25 119 aa4.73□□□□□ -1.65
TDP1-209ENST00000554180 H3BMG7 143 aa4.73□□□□□ -1.65
TDP1-209ENST00000554180 UBE2V1Q13404 147 aa4.73□□□□□ -1.65
TDP1-209ENST00000554180 FAM19A1Q7Z5A9 133 aa4.73□□□□□ -1.65
TDP1-209ENST00000554180 PSORS1C2Q9UIG4 136 aa4.73□□□□□ -1.65
TDP1-209ENST00000554180 DYNC1H1Q14204 4646 aaKnown RBP4.73□□□□□ -1.65
TDP1-209ENST00000554180 H3BQ85 93 aa4.72□□□□□ -1.65
TDP1-209ENST00000554180 GHRHP01286 108 aa4.72□□□□□ -1.65
TDP1-209ENST00000554180 UBE2AP49459 152 aa4.72□□□□□ -1.65
TDP1-209ENST00000554180 XGP55808 180 aa4.72□□□□□ -1.65
TDP1-209ENST00000554180 OCIAD2Q56VL3 154 aa4.72□□□□□ -1.65
TDP1-209ENST00000554180 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.72□□□□□ -1.65
TDP1-209ENST00000554180 KRTAP13-1Q8IUC0 172 aa4.72□□□□□ -1.65
TDP1-209ENST00000554180 Q9BRP9 147 aa4.72□□□□□ -1.65
TDP1-209ENST00000554180 CDK2AP2O75956 126 aa4.71□□□□□ -1.66
TDP1-209ENST00000554180 PRLHP81277 87 aa4.71□□□□□ -1.66
TDP1-209ENST00000554180 C1orf137Q5JT78 98 aa4.71□□□□□ -1.66
TDP1-209ENST00000554180 C9JAW5 83 aa4.7□□□□□ -1.66
TDP1-209ENST00000554180 F8W1H4 67 aa4.7□□□□□ -1.66
TDP1-209ENST00000554180 H3BT86 120 aa4.7□□□□□ -1.66
TDP1-209ENST00000554180 ZNF861PO60384 105 aa4.7□□□□□ -1.66
TDP1-209ENST00000554180 HAMPP81172 84 aa4.7□□□□□ -1.66
TDP1-209ENST00000554180 Q6ZQY7 126 aa4.7□□□□□ -1.66
TDP1-209ENST00000554180 SMCR5Q8TEV8 140 aa4.7□□□□□ -1.66
TDP1-209ENST00000554180 PPDPFLQ8WWR9 84 aa4.7□□□□□ -1.66
TDP1-209ENST00000554180 LINC01600Q96MT4 127 aa4.7□□□□□ -1.66
TDP1-209ENST00000554180 ORMDL1Q9P0S3 153 aa4.7□□□□□ -1.66
TDP1-209ENST00000554180 IGLV7-43P04211 117 aa4.69□□□□□ -1.66
TDP1-209ENST00000554180 HIGD2AQ9BW72 106 aa4.69□□□□□ -1.66
TDP1-209ENST00000554180 PRO0461Q9UI25 63 aa4.69□□□□□ -1.66
TDP1-209ENST00000554180 IGLV5-48A0A075B6I7 105 aa4.68□□□□□ -1.66
TDP1-209ENST00000554180 TMEM256-PLSCR3K7ERE1 68 aa4.68□□□□□ -1.66
TDP1-209ENST00000554180 ANKRD29Q8N6D5 301 aa4.68□□□□□ -1.66
TDP1-209ENST00000554180 ERC2-IT1O76042 136 aa4.67□□□□□ -1.66
TDP1-209ENST00000554180 BAALC-AS2P0C853 105 aa4.67□□□□□ -1.66
TDP1-209ENST00000554180 RPL37AP61513 92 aaKnown RBP4.67□□□□□ -1.66
TDP1-209ENST00000554180 ZNF706Q9Y5V0 76 aaPredicted RBP4.67□□□□□ -1.66
TDP1-209ENST00000554180 SMCPP49901 116 aaPredicted RBP4.66□□□□□ -1.66
TDP1-209ENST00000554180 MTURNQ8N3F0 131 aa4.66□□□□□ -1.66
TDP1-209ENST00000554180 APOBP04114 4563 aaKnown RBP4.66□□□□□ -1.66
TDP1-209ENST00000554180 TEX49A0A1B0GTD5 131 aa4.65□□□□□ -1.67
TDP1-209ENST00000554180 SPRR1BP22528 89 aa4.65□□□□□ -1.67
TDP1-209ENST00000554180 LINC01547P58512 204 aaPredicted RBP4.65□□□□□ -1.67
TDP1-209ENST00000554180 VPS13BQ7Z7G8 4022 aa4.64□□□□□ -1.67
TDP1-209ENST00000554180 TEN1Q86WV5 123 aa4.64□□□□□ -1.67
TDP1-209ENST00000554180 Q8N377 158 aa4.64□□□□□ -1.67
TDP1-209ENST00000554180 ST20-AS1Q8NBB2 130 aa4.64□□□□□ -1.67
TDP1-209ENST00000554180 SRRM2Q9UQ35 2752 aaKnown RBP4.63□□□□□ -1.67
TDP1-209ENST00000554180 JMJD7-PLA2G4BH0Y9G9 81 aa4.63□□□□□ -1.67
TDP1-209ENST00000554180 FAM229AH3BQW9 127 aa4.63□□□□□ -1.67
TDP1-209ENST00000554180 SMR3BP02814 79 aaPredicted RBP4.63□□□□□ -1.67
TDP1-209ENST00000554180 PLA2G1BP04054 148 aaKnown RBP4.63□□□□□ -1.67
TDP1-209ENST00000554180 KRTAP10-4P60372 401 aaPredicted RBP4.63□□□□□ -1.67
TDP1-209ENST00000554180 LINC00483Q53H64 154 aa4.63□□□□□ -1.67
TDP1-209ENST00000554180 SPRR4Q96PI1 79 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms