RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 IGLV7-43P04211 117 aa11.03□□□□□ -0.64
PSEN1-208ENST00000553719 CFC1BP0CG36 223 aa11.02□□□□□ -0.65
PSEN1-208ENST00000553719 CFC1P0CG37 223 aa11.02□□□□□ -0.65
PSEN1-208ENST00000553719 FAT3Q8TDW7 4589 aa11.02□□□□□ -0.65
PSEN1-208ENST00000553719 A0A0B4J2C4 111 aa11.01□□□□□ -0.65
PSEN1-208ENST00000553719 A6NDN8 102 aa11.01□□□□□ -0.65
PSEN1-208ENST00000553719 CTAG1AP78358 180 aa11.01□□□□□ -0.65
PSEN1-208ENST00000553719 TMEM238LA0A1B0GVL6 79 aa11□□□□□ -0.65
PSEN1-208ENST00000553719 A6NJY4 79 aa11□□□□□ -0.65
PSEN1-208ENST00000553719 MYCBP2O75592 4640 aa10.99□□□□□ -0.65
PSEN1-208ENST00000553719 ZNF73O43830 326 aaPredicted RBP10.99□□□□□ -0.65
PSEN1-208ENST00000553719 CBY1Q9Y3M2 126 aa10.99□□□□□ -0.65
PSEN1-208ENST00000553719 A0A1B0GWB2 263 aa10.98□□□□□ -0.65
PSEN1-208ENST00000553719 BVES-AS1Q5T3Y7 98 aa10.98□□□□□ -0.65
PSEN1-208ENST00000553719 RAB37Q96AX2 223 aa10.98□□□□□ -0.65
PSEN1-208ENST00000553719 LRP1Q07954 4544 aaKnown RBP10.97□□□□□ -0.65
PSEN1-208ENST00000553719 H0Y9J4 135 aa10.97□□□□□ -0.65
PSEN1-208ENST00000553719 ZNF861PO60384 105 aa10.97□□□□□ -0.65
PSEN1-208ENST00000553719 B5MCH6 92 aa10.96□□□□□ -0.65
PSEN1-208ENST00000553719 RPL13AP40429 203 aaKnown RBP10.96□□□□□ -0.65
PSEN1-208ENST00000553719 HINT1P49773 126 aaPredicted RBP10.96□□□□□ -0.65
PSEN1-208ENST00000553719 PRLHP81277 87 aa10.96□□□□□ -0.65
PSEN1-208ENST00000553719 FAM19A1Q7Z5A9 133 aa10.96□□□□□ -0.65
PSEN1-208ENST00000553719 M0R143 59 aa10.95□□□□□ -0.66
PSEN1-208ENST00000553719 SMIM11BQ8TCY0 68 aa10.95□□□□□ -0.66
PSEN1-208ENST00000553719 NHP2Q9NX24 153 aaKnown RBP10.95□□□□□ -0.66
PSEN1-208ENST00000553719 RPL28P46779 137 aaKnown RBP10.94□□□□□ -0.66
PSEN1-208ENST00000553719 SPINK6Q6UWN8 80 aa10.94□□□□□ -0.66
PSEN1-208ENST00000553719 DIRC1Q969H9 104 aa10.94□□□□□ -0.66
PSEN1-208ENST00000553719 ETDCA0A1B0GVM5 59 aa10.93□□□□□ -0.66
PSEN1-208ENST00000553719 PCP4L1A6NKN8 68 aa10.93□□□□□ -0.66
PSEN1-208ENST00000553719 UBE2AP49459 152 aa10.93□□□□□ -0.66
PSEN1-208ENST00000553719 C6orf99Q4VX62 202 aa10.93□□□□□ -0.66
PSEN1-208ENST00000553719 Q6ZRX8 168 aa10.93□□□□□ -0.66
PSEN1-208ENST00000553719 PRO1854Q9UHT4 67 aa10.93□□□□□ -0.66
PSEN1-208ENST00000553719 PCLOQ9Y6V0 5065 aa10.92□□□□□ -0.66
PSEN1-208ENST00000553719 TRBV7-6A0A0J9YX20 115 aa10.92□□□□□ -0.66
PSEN1-208ENST00000553719 H7C2G1 150 aa10.92□□□□□ -0.66
PSEN1-208ENST00000553719 K7ERJ3 54 aa10.92□□□□□ -0.66
PSEN1-208ENST00000553719 BATFQ16520 125 aa10.92□□□□□ -0.66
PSEN1-208ENST00000553719 ELOF1P60002 83 aaKnown RBP10.91□□□□□ -0.66
PSEN1-208ENST00000553719 SMCR5Q8TEV8 140 aa10.91□□□□□ -0.66
PSEN1-208ENST00000553719 Q9BRP9 147 aa10.91□□□□□ -0.66
PSEN1-208ENST00000553719 Q1RN00 199 aa10.9□□□□□ -0.66
PSEN1-208ENST00000553719 FLG2Q5D862 2391 aaPredicted RBP10.89□□□□□ -0.67
PSEN1-208ENST00000553719 INAFM2P0DMQ5 153 aa10.88□□□□□ -0.67
PSEN1-208ENST00000553719 COX7BP24311 80 aa10.87□□□□□ -0.67
PSEN1-208ENST00000553719 HIGD2AQ9BW72 106 aa10.86□□□□□ -0.67
PSEN1-208ENST00000553719 TNXBP22105 4242 aa10.85□□□□□ -0.67
PSEN1-208ENST00000553719 ERC2-IT1O76042 136 aa10.84□□□□□ -0.67
PSEN1-208ENST00000553719 TSPAN13O95857 204 aa10.84□□□□□ -0.67
PSEN1-208ENST00000553719 KRTAP1-4P0C5Y4 121 aa10.84□□□□□ -0.67
PSEN1-208ENST00000553719 DHRS4-AS1Q9P1J3 65 aa10.82□□□□□ -0.68
PSEN1-208ENST00000553719 TRIAP1O43715 76 aa10.8□□□□□ -0.68
PSEN1-208ENST00000553719 PSMB2P49721 201 aa10.8□□□□□ -0.68
PSEN1-208ENST00000553719 VAMP3Q15836 100 aa10.8□□□□□ -0.68
PSEN1-208ENST00000553719 LINC00575Q6W349 94 aa10.79□□□□□ -0.68
PSEN1-208ENST00000553719 SNHG12Q9BXW3 62 aa10.79□□□□□ -0.68
PSEN1-208ENST00000553719 SPRR4Q96PI1 79 aa10.78□□□□□ -0.68
PSEN1-208ENST00000553719 H0YGX0 51 aa10.75□□□□□ -0.69
PSEN1-208ENST00000553719 LINC00483Q53H64 154 aa10.75□□□□□ -0.69
PSEN1-208ENST00000553719 ST20-AS1Q8NBB2 130 aa10.75□□□□□ -0.69
PSEN1-208ENST00000553719 LINC01600Q96MT4 127 aa10.75□□□□□ -0.69
PSEN1-208ENST00000553719 FAM218AQ96MZ4 157 aa10.75□□□□□ -0.69
PSEN1-208ENST00000553719 ZNF706Q9Y5V0 76 aaPredicted RBP10.74□□□□□ -0.69
PSEN1-208ENST00000553719 KRTAP29-1A8MX34 341 aaPredicted RBP10.72□□□□□ -0.69
PSEN1-208ENST00000553719 SLC25A20O43772 301 aa10.72□□□□□ -0.69
PSEN1-208ENST00000553719 OXTP01178 125 aa10.72□□□□□ -0.69
PSEN1-208ENST00000553719 COX6CP09669 75 aa10.72□□□□□ -0.69
PSEN1-208ENST00000553719 SCGB1C2P0DMR2 95 aa10.72□□□□□ -0.69
PSEN1-208ENST00000553719 FAM229BQ4G0N7 80 aa10.72□□□□□ -0.69
PSEN1-208ENST00000553719 hADV29S1A0JD25 119 aa10.71□□□□□ -0.69
PSEN1-208ENST00000553719 SPRR1BP22528 89 aa10.71□□□□□ -0.69
PSEN1-208ENST00000553719 LINC01547P58512 204 aaPredicted RBP10.71□□□□□ -0.69
PSEN1-208ENST00000553719 NAA38Q9BRA0 125 aaKnown RBP10.71□□□□□ -0.69
PSEN1-208ENST00000553719 ANAPC11Q9NYG5 84 aa10.71□□□□□ -0.69
PSEN1-208ENST00000553719 IGLV5-48A0A075B6I7 105 aa10.7□□□□□ -0.7
PSEN1-208ENST00000553719 A0A087X002 238 aa10.7□□□□□ -0.7
PSEN1-208ENST00000553719 TAX1BP3O14907 124 aa10.7□□□□□ -0.7
PSEN1-208ENST00000553719 A0A1B0GX51 115 aa10.69□□□□□ -0.7
PSEN1-208ENST00000553719 MT1HL1P0DM35 61 aa10.69□□□□□ -0.7
PSEN1-208ENST00000553719 CLEC2BQ92478 149 aa10.69□□□□□ -0.7
PSEN1-208ENST00000553719 SNCGO76070 127 aa10.68□□□□□ -0.7
PSEN1-208ENST00000553719 COL5A1-AS1Q5SY13 56 aa10.68□□□□□ -0.7
PSEN1-208ENST00000553719 GAGE2AQ6NT46 116 aa10.68□□□□□ -0.7
PSEN1-208ENST00000553719 KRTAP10-8P60410 259 aa10.67□□□□□ -0.7
PSEN1-208ENST00000553719 KRTAP13-2Q52LG2 175 aa10.67□□□□□ -0.7
PSEN1-208ENST00000553719 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.67□□□□□ -0.7
PSEN1-208ENST00000553719 Q6ZQY7 126 aa10.67□□□□□ -0.7
PSEN1-208ENST00000553719 PRR26Q8N8Z3 221 aa10.67□□□□□ -0.7
PSEN1-208ENST00000553719 C9orf118A6NHY6 69 aa10.65□□□□□ -0.7
PSEN1-208ENST00000553719 H3BUT2 72 aa10.65□□□□□ -0.7
PSEN1-208ENST00000553719 CRYGAP11844 174 aa10.65□□□□□ -0.7
PSEN1-208ENST00000553719 LST1O00453 97 aa10.64□□□□□ -0.71
PSEN1-208ENST00000553719 Q8N377 158 aa10.64□□□□□ -0.71
PSEN1-208ENST00000553719 TEX49A0A1B0GTD5 131 aa10.63□□□□□ -0.71
PSEN1-208ENST00000553719 LYRM7Q5U5X0 104 aa10.62□□□□□ -0.71
PSEN1-208ENST00000553719 SMIM29Q86T20 159 aa10.62□□□□□ -0.71
PSEN1-208ENST00000553719 DEFB105AQ8NG35 78 aa10.62□□□□□ -0.71
PSEN1-208ENST00000553719 C3orf22Q8N5N4 141 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms