RNA–Protein interactions for RNA: ENST00000553599.5

PSEN1-207, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-207ENST00000553599 VPS13BQ7Z7G8 4022 aa11.88□□□□□ -0.51
PSEN1-207ENST00000553599 M0R143 59 aa11.87□□□□□ -0.51
PSEN1-207ENST00000553599 ZNF73O43830 326 aaPredicted RBP11.87□□□□□ -0.51
PSEN1-207ENST00000553599 CFC1BP0CG36 223 aa11.87□□□□□ -0.51
PSEN1-207ENST00000553599 CFC1P0CG37 223 aa11.87□□□□□ -0.51
PSEN1-207ENST00000553599 CTAG1AP78358 180 aa11.87□□□□□ -0.51
PSEN1-207ENST00000553599 ETDCA0A1B0GVM5 59 aa11.85□□□□□ -0.51
PSEN1-207ENST00000553599 KRTAP4-16G5E9R7 235 aaPredicted RBP11.85□□□□□ -0.51
PSEN1-207ENST00000553599 H0Y9J4 135 aa11.85□□□□□ -0.51
PSEN1-207ENST00000553599 RPL28P46779 137 aaKnown RBP11.85□□□□□ -0.51
PSEN1-207ENST00000553599 HINT1P49773 126 aaPredicted RBP11.85□□□□□ -0.51
PSEN1-207ENST00000553599 ZNF861PO60384 105 aa11.84□□□□□ -0.51
PSEN1-207ENST00000553599 UBE2AP49459 152 aa11.84□□□□□ -0.51
PSEN1-207ENST00000553599 BVES-AS1Q5T3Y7 98 aa11.84□□□□□ -0.51
PSEN1-207ENST00000553599 FAM19A1Q7Z5A9 133 aa11.84□□□□□ -0.51
PSEN1-207ENST00000553599 SRRM2Q9UQ35 2752 aaKnown RBP11.84□□□□□ -0.51
PSEN1-207ENST00000553599 A0A1B0GWB2 263 aa11.83□□□□□ -0.52
PSEN1-207ENST00000553599 RPL13AP40429 203 aaKnown RBP11.83□□□□□ -0.52
PSEN1-207ENST00000553599 DIRC1Q969H9 104 aa11.83□□□□□ -0.52
PSEN1-207ENST00000553599 PRO1854Q9UHT4 67 aa11.83□□□□□ -0.52
PSEN1-207ENST00000553599 TRBV7-6A0A0J9YX20 115 aa11.82□□□□□ -0.52
PSEN1-207ENST00000553599 SPINK6Q6UWN8 80 aa11.82□□□□□ -0.52
PSEN1-207ENST00000553599 KRTAP13-1Q8IUC0 172 aa11.82□□□□□ -0.52
PSEN1-207ENST00000553599 NHP2Q9NX24 153 aaKnown RBP11.82□□□□□ -0.52
PSEN1-207ENST00000553599 B5MCH6 92 aa11.8□□□□□ -0.52
PSEN1-207ENST00000553599 C6orf99Q4VX62 202 aa11.8□□□□□ -0.52
PSEN1-207ENST00000553599 SMIM11BQ8TCY0 68 aa11.8□□□□□ -0.52
PSEN1-207ENST00000553599 Q6ZRX8 168 aa11.79□□□□□ -0.52
PSEN1-207ENST00000553599 PRLHP81277 87 aa11.77□□□□□ -0.53
PSEN1-207ENST00000553599 VAMP3Q15836 100 aa11.77□□□□□ -0.53
PSEN1-207ENST00000553599 COX7BP24311 80 aa11.76□□□□□ -0.53
PSEN1-207ENST00000553599 ELOF1P60002 83 aaKnown RBP11.76□□□□□ -0.53
PSEN1-207ENST00000553599 KRTAP4-5Q9BYR2 181 aa11.75□□□□□ -0.53
PSEN1-207ENST00000553599 H7C2G1 150 aa11.74□□□□□ -0.53
PSEN1-207ENST00000553599 Q1RN00 199 aa11.74□□□□□ -0.53
PSEN1-207ENST00000553599 INAFM2P0DMQ5 153 aa11.73□□□□□ -0.53
PSEN1-207ENST00000553599 DHRS4-AS1Q9P1J3 65 aa11.73□□□□□ -0.53
PSEN1-207ENST00000553599 K7ERJ3 54 aa11.72□□□□□ -0.53
PSEN1-207ENST00000553599 HIGD2AQ9BW72 106 aa11.72□□□□□ -0.53
PSEN1-207ENST00000553599 SMCR5Q8TEV8 140 aa11.71□□□□□ -0.53
PSEN1-207ENST00000553599 Q9BRP9 147 aa11.7□□□□□ -0.54
PSEN1-207ENST00000553599 H0YGX0 51 aa11.68□□□□□ -0.54
PSEN1-207ENST00000553599 TSPAN13O95857 204 aa11.67□□□□□ -0.54
PSEN1-207ENST00000553599 BATFQ16520 125 aa11.67□□□□□ -0.54
PSEN1-207ENST00000553599 ZNF706Q9Y5V0 76 aaPredicted RBP11.67□□□□□ -0.54
PSEN1-207ENST00000553599 SLC25A20O43772 301 aa11.65□□□□□ -0.54
PSEN1-207ENST00000553599 COX6CP09669 75 aa11.65□□□□□ -0.54
PSEN1-207ENST00000553599 PKHD1L1Q86WI1 4243 aa11.64□□□□□ -0.55
PSEN1-207ENST00000553599 PSMB2P49721 201 aa11.64□□□□□ -0.55
PSEN1-207ENST00000553599 LINC00575Q6W349 94 aa11.64□□□□□ -0.55
PSEN1-207ENST00000553599 TRIAP1O43715 76 aa11.63□□□□□ -0.55
PSEN1-207ENST00000553599 SNCGO76070 127 aa11.63□□□□□ -0.55
PSEN1-207ENST00000553599 PCP4L1A6NKN8 68 aa11.62□□□□□ -0.55
PSEN1-207ENST00000553599 ERC2-IT1O76042 136 aa11.62□□□□□ -0.55
PSEN1-207ENST00000553599 SPRR4Q96PI1 79 aa11.61□□□□□ -0.55
PSEN1-207ENST00000553599 ABCA13Q86UQ4 5058 aa11.61□□□□□ -0.55
PSEN1-207ENST00000553599 hADV29S1A0JD25 119 aa11.6□□□□□ -0.55
PSEN1-207ENST00000553599 SNHG12Q9BXW3 62 aa11.6□□□□□ -0.55
PSEN1-207ENST00000553599 A0A1B0GX51 115 aa11.59□□□□□ -0.55
PSEN1-207ENST00000553599 OXTP01178 125 aa11.59□□□□□ -0.55
PSEN1-207ENST00000553599 KRTAP1-4P0C5Y4 121 aa11.59□□□□□ -0.55
PSEN1-207ENST00000553599 FAM229BQ4G0N7 80 aa11.58□□□□□ -0.56
PSEN1-207ENST00000553599 LINC01600Q96MT4 127 aa11.57□□□□□ -0.56
PSEN1-207ENST00000553599 LINC00483Q53H64 154 aa11.56□□□□□ -0.56
PSEN1-207ENST00000553599 FLG2Q5D862 2391 aaPredicted RBP11.56□□□□□ -0.56
PSEN1-207ENST00000553599 SCGB1C2P0DMR2 95 aa11.55□□□□□ -0.56
PSEN1-207ENST00000553599 COL5A1-AS1Q5SY13 56 aa11.55□□□□□ -0.56
PSEN1-207ENST00000553599 LYRM7Q5U5X0 104 aa11.54□□□□□ -0.56
PSEN1-207ENST00000553599 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.54□□□□□ -0.56
PSEN1-207ENST00000553599 KRTAP29-1A8MX34 341 aaPredicted RBP11.53□□□□□ -0.56
PSEN1-207ENST00000553599 SPRR1BP22528 89 aa11.53□□□□□ -0.56
PSEN1-207ENST00000553599 GAGE2AQ6NT46 116 aa11.53□□□□□ -0.56
PSEN1-207ENST00000553599 ST20-AS1Q8NBB2 130 aa11.53□□□□□ -0.56
PSEN1-207ENST00000553599 IGLV5-48A0A075B6I7 105 aa11.52□□□□□ -0.57
PSEN1-207ENST00000553599 C9orf118A6NHY6 69 aa11.52□□□□□ -0.57
PSEN1-207ENST00000553599 TAX1BP3O14907 124 aa11.52□□□□□ -0.57
PSEN1-207ENST00000553599 CRYGAP11844 174 aa11.52□□□□□ -0.57
PSEN1-207ENST00000553599 OCIAD2Q56VL3 154 aa11.52□□□□□ -0.57
PSEN1-207ENST00000553599 FAM218AQ96MZ4 157 aa11.52□□□□□ -0.57
PSEN1-207ENST00000553599 TEX49A0A1B0GTD5 131 aa11.51□□□□□ -0.57
PSEN1-207ENST00000553599 Q6ZQY7 126 aa11.51□□□□□ -0.57
PSEN1-207ENST00000553599 CLEC2BQ92478 149 aa11.51□□□□□ -0.57
PSEN1-207ENST00000553599 GHRHP01286 108 aa11.5□□□□□ -0.57
PSEN1-207ENST00000553599 PPDPFLQ8WWR9 84 aa11.49□□□□□ -0.57
PSEN1-207ENST00000553599 MYCBP2O75592 4640 aa11.48□□□□□ -0.57
PSEN1-207ENST00000553599 H3BUT2 72 aa11.48□□□□□ -0.57
PSEN1-207ENST00000553599 DNAL4O96015 105 aa11.48□□□□□ -0.57
PSEN1-207ENST00000553599 TRACP01848 142 aa11.48□□□□□ -0.57
PSEN1-207ENST00000553599 ANAPC11Q9NYG5 84 aa11.48□□□□□ -0.57
PSEN1-207ENST00000553599 LST1O00453 97 aa11.47□□□□□ -0.57
PSEN1-207ENST00000553599 LINC01547P58512 204 aaPredicted RBP11.47□□□□□ -0.57
PSEN1-207ENST00000553599 DEFB105AQ8NG35 78 aa11.47□□□□□ -0.57
PSEN1-207ENST00000553599 NAA38Q9BRA0 125 aaKnown RBP11.47□□□□□ -0.57
PSEN1-207ENST00000553599 A0A087X002 238 aa11.46□□□□□ -0.57
PSEN1-207ENST00000553599 PRR26Q8N8Z3 221 aa11.46□□□□□ -0.57
PSEN1-207ENST00000553599 PCLOQ9Y6V0 5065 aa11.45□□□□□ -0.58
PSEN1-207ENST00000553599 TRBV20-1A0A075B6N2 111 aa11.45□□□□□ -0.58
PSEN1-207ENST00000553599 H3BQ85 93 aa11.45□□□□□ -0.58
PSEN1-207ENST00000553599 KRTAP10-8P60410 259 aa11.45□□□□□ -0.58
PSEN1-207ENST00000553599 LAMTOR3Q9UHA4 124 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms