RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 S100A7L2Q5SY68 101 aa10.96□□□□□ -0.65
CPSF2-202ENST00000553427 Q6ZVH6 145 aa10.96□□□□□ -0.65
CPSF2-202ENST00000553427 COPS9Q8WXC6 57 aa10.96□□□□□ -0.65
CPSF2-202ENST00000553427 CRYGAP11844 174 aa10.95□□□□□ -0.66
CPSF2-202ENST00000553427 CBY1Q9Y3M2 126 aa10.95□□□□□ -0.66
CPSF2-202ENST00000553427 IFITM1P13164 125 aa10.94□□□□□ -0.66
CPSF2-202ENST00000553427 HIGD2AQ9BW72 106 aa10.94□□□□□ -0.66
CPSF2-202ENST00000553427 TRAV23DV6A0A075B6W5 121 aa10.93□□□□□ -0.66
CPSF2-202ENST00000553427 A0A087X002 238 aa10.93□□□□□ -0.66
CPSF2-202ENST00000553427 B5MCH6 92 aa10.92□□□□□ -0.66
CPSF2-202ENST00000553427 LINC00518Q8N0U6 118 aa10.92□□□□□ -0.66
CPSF2-202ENST00000553427 SCGB1D1O95968 90 aa10.91□□□□□ -0.66
CPSF2-202ENST00000553427 ZNF706Q9Y5V0 76 aaPredicted RBP10.91□□□□□ -0.66
CPSF2-202ENST00000553427 Q6ZRX8 168 aa10.9□□□□□ -0.66
CPSF2-202ENST00000553427 SPRR4Q96PI1 79 aa10.9□□□□□ -0.66
CPSF2-202ENST00000553427 ZNF73O43830 326 aaPredicted RBP10.89□□□□□ -0.67
CPSF2-202ENST00000553427 SMCR5Q8TEV8 140 aa10.89□□□□□ -0.67
CPSF2-202ENST00000553427 ANAPC11Q9NYG5 84 aa10.89□□□□□ -0.67
CPSF2-202ENST00000553427 KRTAP13-2Q52LG2 175 aa10.88□□□□□ -0.67
CPSF2-202ENST00000553427 TYMSOSQ8TAI1 123 aa10.87□□□□□ -0.67
CPSF2-202ENST00000553427 JOSD1Q15040 202 aaPredicted RBP10.85□□□□□ -0.67
CPSF2-202ENST00000553427 MUSTN1Q8IVN3 82 aa10.85□□□□□ -0.67
CPSF2-202ENST00000553427 OR13C6PQ8NH95 151 aa10.85□□□□□ -0.67
CPSF2-202ENST00000553427 Q9BRP9 147 aa10.85□□□□□ -0.67
CPSF2-202ENST00000553427 HINT1P49773 126 aaPredicted RBP10.83□□□□□ -0.68
CPSF2-202ENST00000553427 LINC00483Q53H64 154 aa10.83□□□□□ -0.68
CPSF2-202ENST00000553427 COX8AP10176 69 aa10.82□□□□□ -0.68
CPSF2-202ENST00000553427 DLEU1O43261 78 aa10.81□□□□□ -0.68
CPSF2-202ENST00000553427 ERC2-IT1O76042 136 aa10.81□□□□□ -0.68
CPSF2-202ENST00000553427 UBR4Q5T4S7 5183 aa10.8□□□□□ -0.68
CPSF2-202ENST00000553427 LRP2P98164 4655 aa10.78□□□□□ -0.68
CPSF2-202ENST00000553427 TRAV13-2A0A0B4J235 113 aa10.78□□□□□ -0.68
CPSF2-202ENST00000553427 TRBV7-6A0A0J9YX20 115 aa10.78□□□□□ -0.68
CPSF2-202ENST00000553427 CTAG1AP78358 180 aa10.78□□□□□ -0.68
CPSF2-202ENST00000553427 ELOF1P60002 83 aaKnown RBP10.77□□□□□ -0.69
CPSF2-202ENST00000553427 C6orf99Q4VX62 202 aa10.77□□□□□ -0.69
CPSF2-202ENST00000553427 C3orf22Q8N5N4 141 aa10.77□□□□□ -0.69
CPSF2-202ENST00000553427 LINC00304Q8N9R0 145 aa10.77□□□□□ -0.69
CPSF2-202ENST00000553427 DHRS4-AS1Q9P1J3 65 aa10.77□□□□□ -0.69
CPSF2-202ENST00000553427 VAMP8Q9BV40 100 aa10.76□□□□□ -0.69
CPSF2-202ENST00000553427 A6NDN8 102 aa10.75□□□□□ -0.69
CPSF2-202ENST00000553427 SPATA45Q537H7 98 aa10.75□□□□□ -0.69
CPSF2-202ENST00000553427 PAM16Q9Y3D7 125 aa10.75□□□□□ -0.69
CPSF2-202ENST00000553427 COX7BP24311 80 aa10.74□□□□□ -0.69
CPSF2-202ENST00000553427 GAGE2AQ6NT46 116 aa10.74□□□□□ -0.69
CPSF2-202ENST00000553427 A0A1B0GWB2 263 aa10.72□□□□□ -0.69
CPSF2-202ENST00000553427 A4D1N5 150 aa10.72□□□□□ -0.69
CPSF2-202ENST00000553427 HIGD1BQ9P298 99 aa10.72□□□□□ -0.69
CPSF2-202ENST00000553427 C14orf144Q96I85 54 aa10.71□□□□□ -0.69
CPSF2-202ENST00000553427 HIST1H4GQ99525 98 aa10.71□□□□□ -0.69
CPSF2-202ENST00000553427 TMA7Q9Y2S6 64 aaKnown RBP10.71□□□□□ -0.69
CPSF2-202ENST00000553427 TSPAN13O95857 204 aa10.7□□□□□ -0.7
CPSF2-202ENST00000553427 SPAG11AQ6PDA7 123 aa10.7□□□□□ -0.7
CPSF2-202ENST00000553427 SLC25A34Q6PIV7 304 aa10.7□□□□□ -0.7
CPSF2-202ENST00000553427 SPRR1BP22528 89 aa10.69□□□□□ -0.7
CPSF2-202ENST00000553427 PYY3Q5JQD4 70 aa10.69□□□□□ -0.7
CPSF2-202ENST00000553427 SMIM11BQ8TCY0 68 aa10.69□□□□□ -0.7
CPSF2-202ENST00000553427 ST20-AS1Q8NBB2 130 aa10.68□□□□□ -0.7
CPSF2-202ENST00000553427 C2orf91Q6ZV80 131 aa10.66□□□□□ -0.7
CPSF2-202ENST00000553427 SSBP3-AS1Q7Z2R9 100 aa10.66□□□□□ -0.7
CPSF2-202ENST00000553427 Q8NBF4 154 aa10.66□□□□□ -0.7
CPSF2-202ENST00000553427 MOBPQ13875 183 aa10.64□□□□□ -0.71
CPSF2-202ENST00000553427 IGLV9-49A0A0B4J1Y8 123 aa10.63□□□□□ -0.71
CPSF2-202ENST00000553427 PRR4Q16378 134 aa10.63□□□□□ -0.71
CPSF2-202ENST00000553427 NHP2Q9NX24 153 aaKnown RBP10.63□□□□□ -0.71
CPSF2-202ENST00000553427 TAL2Q16559 108 aa10.62□□□□□ -0.71
CPSF2-202ENST00000553427 LPAP08519 4548 aa10.62□□□□□ -0.71
CPSF2-202ENST00000553427 VAMP3Q15836 100 aa10.61□□□□□ -0.71
CPSF2-202ENST00000553427 IGLV5-48A0A075B6I7 105 aa10.6□□□□□ -0.71
CPSF2-202ENST00000553427 SPINK1P00995 79 aa10.6□□□□□ -0.71
CPSF2-202ENST00000553427 C12orf57Q99622 126 aa10.6□□□□□ -0.71
CPSF2-202ENST00000553427 RPS29P62273 56 aaKnown RBP10.59□□□□□ -0.71
CPSF2-202ENST00000553427 A0A0B4J2C4 111 aa10.58□□□□□ -0.72
CPSF2-202ENST00000553427 TEX49A0A1B0GTD5 131 aa10.58□□□□□ -0.72
CPSF2-202ENST00000553427 CFC1BP0CG36 223 aa10.58□□□□□ -0.72
CPSF2-202ENST00000553427 CFC1P0CG37 223 aa10.58□□□□□ -0.72
CPSF2-202ENST00000553427 C9orf153Q5TBE3 101 aa10.58□□□□□ -0.72
CPSF2-202ENST00000553427 LAMTOR3Q9UHA4 124 aa10.58□□□□□ -0.72
CPSF2-202ENST00000553427 SLC25A20O43772 301 aa10.56□□□□□ -0.72
CPSF2-202ENST00000553427 LINC01547P58512 204 aaPredicted RBP10.56□□□□□ -0.72
CPSF2-202ENST00000553427 LINC00575Q6W349 94 aa10.56□□□□□ -0.72
CPSF2-202ENST00000553427 CEND1Q8N111 149 aa10.56□□□□□ -0.72
CPSF2-202ENST00000553427 TMEM238LA0A1B0GVL6 79 aa10.55□□□□□ -0.72
CPSF2-202ENST00000553427 A6NJY4 79 aa10.55□□□□□ -0.72
CPSF2-202ENST00000553427 BVES-AS1Q5T3Y7 98 aa10.55□□□□□ -0.72
CPSF2-202ENST00000553427 RAB37Q96AX2 223 aa10.54□□□□□ -0.72
CPSF2-202ENST00000553427 RETNLBQ9BQ08 111 aa10.54□□□□□ -0.72
CPSF2-202ENST00000553427 DEFB105AQ8NG35 78 aa10.53□□□□□ -0.72
CPSF2-202ENST00000553427 RNF213Q63HN8 5207 aa10.52□□□□□ -0.73
CPSF2-202ENST00000553427 SMCPP49901 116 aaPredicted RBP10.52□□□□□ -0.73
CPSF2-202ENST00000553427 SMIM29Q86T20 159 aa10.52□□□□□ -0.73
CPSF2-202ENST00000553427 HSD52Q0P140 79 aa10.51□□□□□ -0.73
CPSF2-202ENST00000553427 FP248Q71RG6 208 aaPredicted RBP10.51□□□□□ -0.73
CPSF2-202ENST00000553427 hADV29S1A0JD25 119 aa10.5□□□□□ -0.73
CPSF2-202ENST00000553427 FXYD2P54710 66 aa10.5□□□□□ -0.73
CPSF2-202ENST00000553427 Q8N377 158 aa10.5□□□□□ -0.73
CPSF2-202ENST00000553427 UQCR10Q9UDW1 63 aa10.5□□□□□ -0.73
CPSF2-202ENST00000553427 Q1RN00 199 aa10.49□□□□□ -0.73
CPSF2-202ENST00000553427 H7C2G1 150 aa10.48□□□□□ -0.73
CPSF2-202ENST00000553427 TPRXLQ17RH7 258 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms