RNA–Protein interactions for RNA: ENST00000552773.1

RFX4-210, Transcript of regulatory factor X4, humanhuman

TSL 1 (best)

Gene RFX4, Length 1,659 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-210ENST00000552773 PSCAO43653 123 aa6.79□□□□□ -1.32
RFX4-210ENST00000552773 C9orf153Q5TBE3 101 aa6.79□□□□□ -1.32
RFX4-210ENST00000552773 IGLV1-50A0A075B6I6 118 aa6.78□□□□□ -1.32
RFX4-210ENST00000552773 CCDC179H3BU77 68 aa6.78□□□□□ -1.32
RFX4-210ENST00000552773 Q6ZRX8 168 aa6.78□□□□□ -1.32
RFX4-210ENST00000552773 MRPL55Q7Z7F7 128 aaKnown RBP6.78□□□□□ -1.32
RFX4-210ENST00000552773 SERP2Q8N6R1 65 aa6.78□□□□□ -1.32
RFX4-210ENST00000552773 B9D2Q9BPU9 175 aa6.78□□□□□ -1.32
RFX4-210ENST00000552773 NUPR2A6NF83 97 aa6.77□□□□□ -1.32
RFX4-210ENST00000552773 SPRR1AP35321 89 aa6.77□□□□□ -1.32
RFX4-210ENST00000552773 CNBPP62633 177 aaKnown RBP6.77□□□□□ -1.32
RFX4-210ENST00000552773 CRYGAP11844 174 aa6.76□□□□□ -1.33
RFX4-210ENST00000552773 FUSP35637 526 aaKnown RBP eCLIP6.76□□□□□ -1.33
RFX4-210ENST00000552773 SERTAD4-AS1Q5TG53 156 aa6.76□□□□□ -1.33
RFX4-210ENST00000552773 Q6ZVQ6 151 aa6.76□□□□□ -1.33
RFX4-210ENST00000552773 C16orf90A8MZG2 172 aa6.75□□□□□ -1.33
RFX4-210ENST00000552773 PRB2P02812 416 aaPredicted RBP6.75□□□□□ -1.33
RFX4-210ENST00000552773 HAMPP81172 84 aa6.75□□□□□ -1.33
RFX4-210ENST00000552773 LINC01547P58512 204 aaPredicted RBP6.74□□□□□ -1.33
RFX4-210ENST00000552773 LINC00474Q9P2X8 69 aa6.74□□□□□ -1.33
RFX4-210ENST00000552773 IGLV5-48A0A075B6I7 105 aa6.74□□□□□ -1.33
RFX4-210ENST00000552773 REG3GQ6UW15 175 aa6.74□□□□□ -1.33
RFX4-210ENST00000552773 APLNQ9ULZ1 77 aa6.73□□□□□ -1.33
RFX4-210ENST00000552773 RPL37AP8A6NKH3 93 aa6.72□□□□□ -1.33
RFX4-210ENST00000552773 F8WEM9 126 aa6.72□□□□□ -1.33
RFX4-210ENST00000552773 KRTAP4-16G5E9R7 235 aaPredicted RBP6.72□□□□□ -1.33
RFX4-210ENST00000552773 NREPQ16612 68 aa6.72□□□□□ -1.33
RFX4-210ENST00000552773 UBE2BP63146 152 aa6.71□□□□□ -1.34
RFX4-210ENST00000552773 FAM19A5Q7Z5A7 132 aaPredicted RBP6.71□□□□□ -1.34
RFX4-210ENST00000552773 Q8N377 158 aa6.7□□□□□ -1.34
RFX4-210ENST00000552773 TRAV7A0A075B6U4 112 aa6.69□□□□□ -1.34
RFX4-210ENST00000552773 A0A087WVE0 104 aa6.69□□□□□ -1.34
RFX4-210ENST00000552773 DEFB105AQ8NG35 78 aa6.69□□□□□ -1.34
RFX4-210ENST00000552773 SS18L2Q9UHA2 77 aa6.69□□□□□ -1.34
RFX4-210ENST00000552773 CASC10Q5T4H9 136 aa6.68□□□□□ -1.34
RFX4-210ENST00000552773 H0Y9J4 135 aa6.68□□□□□ -1.34
RFX4-210ENST00000552773 TMEM258P61165 79 aa6.68□□□□□ -1.34
RFX4-210ENST00000552773 FAM19A1Q7Z5A9 133 aa6.68□□□□□ -1.34
RFX4-210ENST00000552773 BPY2O14599 106 aa6.67□□□□□ -1.34
RFX4-210ENST00000552773 C1orf137Q5JT78 98 aa6.67□□□□□ -1.34
RFX4-210ENST00000552773 MAST4O15021 2626 aa6.66□□□□□ -1.34
RFX4-210ENST00000552773 NBDYA0A0U1RRE5 68 aa6.66□□□□□ -1.34
RFX4-210ENST00000552773 FAM168BA1KXE4 195 aa6.66□□□□□ -1.34
RFX4-210ENST00000552773 Q9BRP9 147 aa6.66□□□□□ -1.34
RFX4-210ENST00000552773 STAB1Q9NY15 2570 aa6.66□□□□□ -1.34
RFX4-210ENST00000552773 TRRAPQ9Y4A5 3859 aa6.66□□□□□ -1.34
RFX4-210ENST00000552773 FLNBO75369 2602 aaKnown RBP6.66□□□□□ -1.34
RFX4-210ENST00000552773 Q8NBF4 154 aa6.65□□□□□ -1.34
RFX4-210ENST00000552773 C9orf163Q8N9P6 203 aa6.65□□□□□ -1.35
RFX4-210ENST00000552773 A0A096LNI7 61 aa6.64□□□□□ -1.35
RFX4-210ENST00000552773 NDUFC1O43677 76 aa6.64□□□□□ -1.35
RFX4-210ENST00000552773 SPRR4Q96PI1 79 aa6.64□□□□□ -1.35
RFX4-210ENST00000552773 BAHCC1Q9P281 2608 aa6.63□□□□□ -1.35
RFX4-210ENST00000552773 M0R2N4 97 aa6.63□□□□□ -1.35
RFX4-210ENST00000552773 IGKV2-24A0A0C4DH68 120 aa6.62□□□□□ -1.35
RFX4-210ENST00000552773 ERC2-IT1O76042 136 aa6.62□□□□□ -1.35
RFX4-210ENST00000552773 RPS28P62857 69 aaKnown RBP6.62□□□□□ -1.35
RFX4-210ENST00000552773 MDFIQ99750 246 aa6.62□□□□□ -1.35
RFX4-210ENST00000552773 FBN1P35555 2871 aaKnown RBP6.62□□□□□ -1.35
RFX4-210ENST00000552773 KRTAP7-1Q8IUC3 87 aa6.61□□□□□ -1.35
RFX4-210ENST00000552773 KRTAP1-5Q9BYS1 174 aa6.61□□□□□ -1.35
RFX4-210ENST00000552773 IGLV8-61A0A075B6I0 122 aa6.61□□□□□ -1.35
RFX4-210ENST00000552773 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.59□□□□□ -1.35
RFX4-210ENST00000552773 J3KT08 172 aa6.59□□□□□ -1.35
RFX4-210ENST00000552773 TENM3Q9P273 2699 aa6.59□□□□□ -1.35
RFX4-210ENST00000552773 LRCOL1A6NCL2 159 aa6.58□□□□□ -1.36
RFX4-210ENST00000552773 C3orf84H3BNL1 204 aa6.58□□□□□ -1.36
RFX4-210ENST00000552773 SPRR1BP22528 89 aa6.58□□□□□ -1.36
RFX4-210ENST00000552773 UBE2AP49459 152 aa6.58□□□□□ -1.36
RFX4-210ENST00000552773 ST20-AS1Q8NBB2 130 aa6.58□□□□□ -1.36
RFX4-210ENST00000552773 COL6A5A8TX70 2615 aa6.58□□□□□ -1.36
RFX4-210ENST00000552773 A0A1W2PNN7 141 aa6.58□□□□□ -1.36
RFX4-210ENST00000552773 KLKP1Q107X0 134 aa6.58□□□□□ -1.36
RFX4-210ENST00000552773 DNAH3Q8TD57 4116 aa6.57□□□□□ -1.36
RFX4-210ENST00000552773 A0A1W2PNM2 257 aa6.57□□□□□ -1.36
RFX4-210ENST00000552773 ATP5EP56381 51 aaPredicted RBP6.57□□□□□ -1.36
RFX4-210ENST00000552773 DPH3Q96FX2 82 aa6.57□□□□□ -1.36
RFX4-210ENST00000552773 HIGD2AQ9BW72 106 aa6.57□□□□□ -1.36
RFX4-210ENST00000552773 IGKV4-1P06312 121 aa6.56□□□□□ -1.36
RFX4-210ENST00000552773 C20orf197Q8N268 126 aa6.56□□□□□ -1.36
RFX4-210ENST00000552773 LINC00476Q8WZB0 136 aa6.56□□□□□ -1.36
RFX4-210ENST00000552773 RPL37AP61513 92 aaKnown RBP6.55□□□□□ -1.36
RFX4-210ENST00000552773 SCXQ7RTU7 201 aa6.55□□□□□ -1.36
RFX4-210ENST00000552773 ZNF706Q9Y5V0 76 aaPredicted RBP6.55□□□□□ -1.36
RFX4-210ENST00000552773 SMIM29Q86T20 159 aa6.55□□□□□ -1.36
RFX4-210ENST00000552773 NOTCH1P46531 2555 aa6.54□□□□□ -1.36
RFX4-210ENST00000552773 PRLHP81277 87 aa6.54□□□□□ -1.36
RFX4-210ENST00000552773 Q6ZRN7 208 aaPredicted RBP6.54□□□□□ -1.36
RFX4-210ENST00000552773 PKD1L1Q8TDX9 2849 aa6.54□□□□□ -1.36
RFX4-210ENST00000552773 EPM2AB3EWF7 344 aa6.53□□□□□ -1.36
RFX4-210ENST00000552773 IGFL1Q6UW32 110 aa6.52□□□□□ -1.37
RFX4-210ENST00000552773 PHF5AQ7RTV0 110 aaKnown RBP6.52□□□□□ -1.37
RFX4-210ENST00000552773 A0A087WTM6 91 aa6.51□□□□□ -1.37
RFX4-210ENST00000552773 FAM236DA0A1B0GTK5 79 aa6.51□□□□□ -1.37
RFX4-210ENST00000552773 FAM236CP0DP71 79 aa6.51□□□□□ -1.37
RFX4-210ENST00000552773 SPACA4Q8TDM5 124 aa6.51□□□□□ -1.37
RFX4-210ENST00000552773 CMYA5Q8N3K9 4069 aa6.49□□□□□ -1.37
RFX4-210ENST00000552773 CHTF8P0CG12 524 aa6.49□□□□□ -1.37
RFX4-210ENST00000552773 TMEM254Q8TBM7 123 aa6.49□□□□□ -1.37
RFX4-210ENST00000552773 OCR1Q9BZK8 76 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms