RNA–Protein interactions for RNA: ENST00000551079.1

GPN3-209, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 833 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-209ENST00000551079 GCN1Q92616 2671 aaKnown RBP-1.09□□□□□ -2.58
GPN3-209ENST00000551079 FAM135AQ9P2D6 1515 aa-1.09□□□□□ -2.58
GPN3-209ENST00000551079 RAPGEF2Q9Y4G8 1499 aa-1.09□□□□□ -2.58
GPN3-209ENST00000551079 F8WEM9 126 aa-1.09□□□□□ -2.58
GPN3-209ENST00000551079 S100A10P60903 97 aa-1.09□□□□□ -2.58
GPN3-209ENST00000551079 MRPS10P82664 201 aaKnown RBP-1.09□□□□□ -2.58
GPN3-209ENST00000551079 FAM186AA6NE01 2351 aa-1.1□□□□□ -2.58
GPN3-209ENST00000551079 APOBP04114 4563 aaKnown RBP-1.1□□□□□ -2.58
GPN3-209ENST00000551079 CLTCQ00610 1675 aaKnown RBP-1.1□□□□□ -2.58
GPN3-209ENST00000551079 NDUFC1O43677 76 aa-1.1□□□□□ -2.59
GPN3-209ENST00000551079 CLIP1P30622 1438 aa-1.1□□□□□ -2.59
GPN3-209ENST00000551079 VPS13BQ7Z7G8 4022 aa-1.11□□□□□ -2.59
GPN3-209ENST00000551079 LAMA1P25391 3075 aa-1.11□□□□□ -2.59
GPN3-209ENST00000551079 DNAH11Q96DT5 4516 aa-1.11□□□□□ -2.59
GPN3-209ENST00000551079 ANK3Q12955 4377 aaKnown RBP-1.11□□□□□ -2.59
GPN3-209ENST00000551079 DSPP15924 2871 aaKnown RBP-1.11□□□□□ -2.59
GPN3-209ENST00000551079 H0YGG7 62 aa-1.11□□□□□ -2.59
GPN3-209ENST00000551079 KALRNO60229 2985 aa-1.11□□□□□ -2.59
GPN3-209ENST00000551079 SERP2Q8N6R1 65 aa-1.11□□□□□ -2.59
GPN3-209ENST00000551079 C14orf144Q96I85 54 aa-1.11□□□□□ -2.59
GPN3-209ENST00000551079 MAGI2Q86UL8 1455 aa-1.12□□□□□ -2.59
GPN3-209ENST00000551079 MTORP42345 2549 aa-1.12□□□□□ -2.59
GPN3-209ENST00000551079 TMEM218A2RU14 115 aa-1.12□□□□□ -2.59
GPN3-209ENST00000551079 MPC2O95563 127 aa-1.12□□□□□ -2.59
GPN3-209ENST00000551079 MT1AP04731 61 aa-1.12□□□□□ -2.59
GPN3-209ENST00000551079 ETDBQ3ZM63 59 aa-1.12□□□□□ -2.59
GPN3-209ENST00000551079 ANKRD11Q6UB99 2663 aaPredicted RBP-1.12□□□□□ -2.59
GPN3-209ENST00000551079 SUPT6HQ7KZ85 1726 aaKnown RBP-1.12□□□□□ -2.59
GPN3-209ENST00000551079 PKD1L2Q7Z442 2459 aa-1.13□□□□□ -2.59
GPN3-209ENST00000551079 D6R8Y8 96 aa-1.13□□□□□ -2.59
GPN3-209ENST00000551079 ATOX1O00244 68 aa-1.13□□□□□ -2.59
GPN3-209ENST00000551079 NDUFA3O95167 84 aa-1.13□□□□□ -2.59
GPN3-209ENST00000551079 MUSTN1Q8IVN3 82 aa-1.13□□□□□ -2.59
GPN3-209ENST00000551079 TNRC6CQ9HCJ0 1690 aaKnown RBP-1.13□□□□□ -2.59
GPN3-209ENST00000551079 ABCC2Q92887 1545 aa-1.14□□□□□ -2.59
GPN3-209ENST00000551079 RNF213Q63HN8 5207 aa-1.14□□□□□ -2.59
GPN3-209ENST00000551079 ALKQ9UM73 1620 aa-1.14□□□□□ -2.59
GPN3-209ENST00000551079 ATP6V1G2-DDX39BF2Z307 99 aa-1.14□□□□□ -2.59
GPN3-209ENST00000551079 H3BNG1 76 aa-1.14□□□□□ -2.59
GPN3-209ENST00000551079 LEPROTL1O95214 131 aa-1.14□□□□□ -2.59
GPN3-209ENST00000551079 FAUP35544 74 aaKnown RBP-1.14□□□□□ -2.59
GPN3-209ENST00000551079 AP4S1Q9Y587 144 aa-1.14□□□□□ -2.59
GPN3-209ENST00000551079 LRRC7Q96NW7 1537 aa-1.15□□□□□ -2.59
GPN3-209ENST00000551079 BIRC6Q9NR09 4857 aa-1.15□□□□□ -2.59
GPN3-209ENST00000551079 RGPD3A6NKT7 1758 aaPredicted RBP-1.15□□□□□ -2.59
GPN3-209ENST00000551079 RGPD4Q7Z3J3 1758 aa-1.15□□□□□ -2.59
GPN3-209ENST00000551079 COL5A1-AS1Q5SY13 56 aa-1.15□□□□□ -2.59
GPN3-209ENST00000551079 UBE2D4Q9Y2X8 147 aa-1.15□□□□□ -2.59
GPN3-209ENST00000551079 RYR2Q92736 4967 aa-1.16□□□□□ -2.59
GPN3-209ENST00000551079 COX7BP24311 80 aa-1.16□□□□□ -2.6
GPN3-209ENST00000551079 SARNPP82979 210 aaKnown RBP-1.16□□□□□ -2.6
GPN3-209ENST00000551079 POLR1AO95602 1720 aaPredicted RBP-1.16□□□□□ -2.6
GPN3-209ENST00000551079 ANKRD26Q9UPS8 1709 aa-1.16□□□□□ -2.6
GPN3-209ENST00000551079 CEP290O15078 2479 aa-1.16□□□□□ -2.6
GPN3-209ENST00000551079 MGAM2Q2M2H8 2515 aa-1.17□□□□□ -2.6
GPN3-209ENST00000551079 FYCO1Q9BQS8 1478 aa-1.17□□□□□ -2.6
GPN3-209ENST00000551079 ZNF831Q5JPB2 1677 aa-1.17□□□□□ -2.6
GPN3-209ENST00000551079 TIAM2Q8IVF5 1701 aa-1.18□□□□□ -2.6
GPN3-209ENST00000551079 DOT1LQ8TEK3 1739 aa-1.18□□□□□ -2.6
GPN3-209ENST00000551079 RGPD8O14715 1765 aaPredicted RBP-1.18□□□□□ -2.6
GPN3-209ENST00000551079 AKAP12Q02952 1782 aa-1.18□□□□□ -2.6
GPN3-209ENST00000551079 RGPD5Q99666 1765 aa-1.18□□□□□ -2.6
GPN3-209ENST00000551079 LAMA2P24043 3122 aaKnown RBP-1.18□□□□□ -2.6
GPN3-209ENST00000551079 UQCRHLA0A096LP55 91 aa-1.18□□□□□ -2.6
GPN3-209ENST00000551079 NCMAPQ5T1S8 102 aa-1.18□□□□□ -2.6
GPN3-209ENST00000551079 CNTLNQ9NXG0 1405 aa-1.18□□□□□ -2.6
GPN3-209ENST00000551079 A0A0C4DFX4 3053 aa-1.19□□□□□ -2.6
GPN3-209ENST00000551079 S100PP25815 95 aa-1.19□□□□□ -2.6
GPN3-209ENST00000551079 ZNF720Q7Z2F6 126 aa-1.19□□□□□ -2.6
GPN3-209ENST00000551079 LTN1O94822 1766 aa-1.19□□□□□ -2.6
GPN3-209ENST00000551079 UTP20O75691 2785 aaKnown RBP-1.2□□□□□ -2.6
GPN3-209ENST00000551079 HMGN3Q15651 99 aa-1.2□□□□□ -2.6
GPN3-209ENST00000551079 TEX14Q8IWB6 1497 aa-1.2□□□□□ -2.6
GPN3-209ENST00000551079 DNAH2Q9P225 4427 aa-1.22□□□□□ -2.6
GPN3-209ENST00000551079 MYO3AQ8NEV4 1616 aa-1.22□□□□□ -2.6
GPN3-209ENST00000551079 USP32Q8NFA0 1604 aa-1.22□□□□□ -2.6
GPN3-209ENST00000551079 NBEAQ8NFP9 2946 aa-1.22□□□□□ -2.6
GPN3-209ENST00000551079 NBEAL2Q6ZNJ1 2754 aa-1.22□□□□□ -2.6
GPN3-209ENST00000551079 USP9XQ93008 2570 aaPredicted RBP-1.22□□□□□ -2.6
GPN3-209ENST00000551079 LRRC9Q6ZRR7 1453 aa-1.22□□□□□ -2.6
GPN3-209ENST00000551079 RBP2P50120 134 aa-1.22□□□□□ -2.6
GPN3-209ENST00000551079 NMSQ5H8A3 153 aa-1.22□□□□□ -2.6
GPN3-209ENST00000551079 NESP48681 1621 aa-1.22□□□□□ -2.61
GPN3-209ENST00000551079 NEXMIFQ5QGS0 1516 aa-1.23□□□□□ -2.61
GPN3-209ENST00000551079 IQCF6A8MYZ5 107 aa-1.23□□□□□ -2.61
GPN3-209ENST00000551079 ALKAL2Q6UX46 152 aa-1.23□□□□□ -2.61
GPN3-209ENST00000551079 GAFA1Q96PS6 74 aa-1.23□□□□□ -2.61
GPN3-209ENST00000551079 C20orf78Q9BR46 151 aa-1.23□□□□□ -2.61
GPN3-209ENST00000551079 DPY30Q9C005 99 aa-1.23□□□□□ -2.61
GPN3-209ENST00000551079 PEG3Q9GZU2 1588 aa-1.23□□□□□ -2.61
GPN3-209ENST00000551079 ACACBO00763 2458 aa-1.23□□□□□ -2.61
GPN3-209ENST00000551079 DNAH1Q9P2D7 4330 aa-1.23□□□□□ -2.61
GPN3-209ENST00000551079 WDR87Q6ZQQ6 2873 aa-1.23□□□□□ -2.61
GPN3-209ENST00000551079 ATP7BP35670 1465 aa-1.24□□□□□ -2.61
GPN3-209ENST00000551079 TMEM131LA2VDJ0 1609 aa-1.24□□□□□ -2.61
GPN3-209ENST00000551079 FANCAO15360 1455 aa-1.24□□□□□ -2.61
GPN3-209ENST00000551079 ABCC10Q5T3U5 1492 aa-1.24□□□□□ -2.61
GPN3-209ENST00000551079 EPRSP07814 1512 aaKnown RBP-1.25□□□□□ -2.61
GPN3-209ENST00000551079 TCEAL7Q9BRU2 100 aa-1.25□□□□□ -2.61
GPN3-209ENST00000551079 ATP10BO94823 1461 aa-1.25□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 162.2 ms