RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 PRLHP81277 87 aa6.86□□□□□ -1.31
SMARCC2-209ENST00000550164 C22orf24Q9Y442 160 aa6.86□□□□□ -1.31
SMARCC2-209ENST00000550164 LINC00474Q9P2X8 69 aa6.85□□□□□ -1.31
SMARCC2-209ENST00000550164 DMDP11532 3685 aa6.85□□□□□ -1.31
SMARCC2-209ENST00000550164 HRNRQ86YZ3 2850 aaPredicted RBP6.85□□□□□ -1.31
SMARCC2-209ENST00000550164 Q6ZRP5 223 aa6.85□□□□□ -1.31
SMARCC2-209ENST00000550164 LINC00167Q96N53 147 aa6.85□□□□□ -1.31
SMARCC2-209ENST00000550164 HCG22E2RYF7 251 aa6.84□□□□□ -1.31
SMARCC2-209ENST00000550164 C14orf177Q52M58 125 aa6.84□□□□□ -1.31
SMARCC2-209ENST00000550164 GVQW2A0A096LPI5 108 aaPredicted RBP6.84□□□□□ -1.31
SMARCC2-209ENST00000550164 KLKP1Q107X0 134 aa6.84□□□□□ -1.31
SMARCC2-209ENST00000550164 ST20-AS1Q8NBB2 130 aa6.84□□□□□ -1.31
SMARCC2-209ENST00000550164 MAST4O15021 2626 aa6.84□□□□□ -1.31
SMARCC2-209ENST00000550164 A6NED7 52 aa6.83□□□□□ -1.32
SMARCC2-209ENST00000550164 IGLV9-49A0A0B4J1Y8 123 aa6.83□□□□□ -1.32
SMARCC2-209ENST00000550164 SETXQ7Z333 2677 aaKnown RBP6.83□□□□□ -1.32
SMARCC2-209ENST00000550164 Q9BRP9 147 aa6.82□□□□□ -1.32
SMARCC2-209ENST00000550164 HELZ2Q9BYK8 2649 aaKnown RBP6.82□□□□□ -1.32
SMARCC2-209ENST00000550164 LINC01556Q5JQF7 62 aa6.82□□□□□ -1.32
SMARCC2-209ENST00000550164 CASC2Q6XLA1 102 aa6.82□□□□□ -1.32
SMARCC2-209ENST00000550164 LINC00612Q8N6U2 182 aa6.82□□□□□ -1.32
SMARCC2-209ENST00000550164 LINC00528Q8N1L1 170 aa6.82□□□□□ -1.32
SMARCC2-209ENST00000550164 TRBV7-4A0A0J9YYF1 115 aa6.82□□□□□ -1.32
SMARCC2-209ENST00000550164 UBR5O95071 2799 aaPredicted RBP6.82□□□□□ -1.32
SMARCC2-209ENST00000550164 LAMA5O15230 3695 aa6.81□□□□□ -1.32
SMARCC2-209ENST00000550164 Q8NBF4 154 aa6.81□□□□□ -1.32
SMARCC2-209ENST00000550164 SPINK6Q6UWN8 80 aa6.81□□□□□ -1.32
SMARCC2-209ENST00000550164 Q6ZRX8 168 aa6.81□□□□□ -1.32
SMARCC2-209ENST00000550164 LINC00336Q6ZUF6 198 aa6.81□□□□□ -1.32
SMARCC2-209ENST00000550164 PRR34Q9NV39 138 aa6.81□□□□□ -1.32
SMARCC2-209ENST00000550164 F8WDY8 70 aa6.81□□□□□ -1.32
SMARCC2-209ENST00000550164 CR1P17927 2039 aa6.8□□□□□ -1.32
SMARCC2-209ENST00000550164 H0Y9P7 68 aa6.8□□□□□ -1.32
SMARCC2-209ENST00000550164 RELNP78509 3460 aa6.8□□□□□ -1.32
SMARCC2-209ENST00000550164 PCOTHQ58A44 107 aa6.79□□□□□ -1.32
SMARCC2-209ENST00000550164 PRR15LQ9BU68 103 aa6.79□□□□□ -1.32
SMARCC2-209ENST00000550164 PMAIP1Q13794 54 aa6.79□□□□□ -1.32
SMARCC2-209ENST00000550164 SERTAD4-AS1Q5TG53 156 aa6.79□□□□□ -1.32
SMARCC2-209ENST00000550164 FAM168BA1KXE4 195 aa6.78□□□□□ -1.32
SMARCC2-209ENST00000550164 LINC00476Q8WZB0 136 aa6.77□□□□□ -1.33
SMARCC2-209ENST00000550164 Q8NDZ9 215 aa6.77□□□□□ -1.33
SMARCC2-209ENST00000550164 UTP20O75691 2785 aaKnown RBP6.76□□□□□ -1.33
SMARCC2-209ENST00000550164 KRTAP10-3P60369 221 aa6.76□□□□□ -1.33
SMARCC2-209ENST00000550164 NOTCH1P46531 2555 aa6.76□□□□□ -1.33
SMARCC2-209ENST00000550164 K7EQZ3 153 aa6.76□□□□□ -1.33
SMARCC2-209ENST00000550164 Q8N377 158 aa6.76□□□□□ -1.33
SMARCC2-209ENST00000550164 KRTAP1-3Q8IUG1 177 aa6.75□□□□□ -1.33
SMARCC2-209ENST00000550164 C15orf56Q8N910 161 aa6.75□□□□□ -1.33
SMARCC2-209ENST00000550164 H3BNG1 76 aa6.75□□□□□ -1.33
SMARCC2-209ENST00000550164 NF1P21359 2839 aa6.75□□□□□ -1.33
SMARCC2-209ENST00000550164 FBN2P35556 2912 aa6.74□□□□□ -1.33
SMARCC2-209ENST00000550164 DCHS2Q6V1P9 2916 aa6.74□□□□□ -1.33
SMARCC2-209ENST00000550164 ERC2-IT1O76042 136 aa6.74□□□□□ -1.33
SMARCC2-209ENST00000550164 RPL37AP61513 92 aaKnown RBP6.74□□□□□ -1.33
SMARCC2-209ENST00000550164 KCNQ1DNQ9H478 68 aa6.74□□□□□ -1.33
SMARCC2-209ENST00000550164 A0A0G2JQZ4 141 aa6.74□□□□□ -1.33
SMARCC2-209ENST00000550164 A0A1W2PNN7 141 aa6.74□□□□□ -1.33
SMARCC2-209ENST00000550164 C1orf64Q8NEQ6 169 aa6.74□□□□□ -1.33
SMARCC2-209ENST00000550164 SMG1Q96Q15 3661 aaKnown RBP6.74□□□□□ -1.33
SMARCC2-209ENST00000550164 A0A1B0GW54 56 aa6.74□□□□□ -1.33
SMARCC2-209ENST00000550164 IGHV6-1A0A0B4J1U7 121 aa6.73□□□□□ -1.33
SMARCC2-209ENST00000550164 hDV103S1A0JD37 113 aa6.73□□□□□ -1.33
SMARCC2-209ENST00000550164 CSMD1Q96PZ7 3565 aa6.73□□□□□ -1.33
SMARCC2-209ENST00000550164 CRYBG3Q68DQ2 2970 aa6.73□□□□□ -1.33
SMARCC2-209ENST00000550164 TEP1Q99973 2627 aaKnown RBP6.73□□□□□ -1.33
SMARCC2-209ENST00000550164 LINC00588Q9Y4M8 146 aa6.7□□□□□ -1.34
SMARCC2-209ENST00000550164 IGLV1-50A0A075B6I6 118 aa6.7□□□□□ -1.34
SMARCC2-209ENST00000550164 CELSR2Q9HCU4 2923 aa6.69□□□□□ -1.34
SMARCC2-209ENST00000550164 A0A1W2PNM2 257 aa6.69□□□□□ -1.34
SMARCC2-209ENST00000550164 OXTP01178 125 aa6.69□□□□□ -1.34
SMARCC2-209ENST00000550164 KRTAP1-1Q07627 177 aa6.68□□□□□ -1.34
SMARCC2-209ENST00000550164 Q5XG85 94 aa6.68□□□□□ -1.34
SMARCC2-209ENST00000550164 PHF5AQ7RTV0 110 aaKnown RBP6.68□□□□□ -1.34
SMARCC2-209ENST00000550164 COL6A5A8TX70 2615 aa6.67□□□□□ -1.34
SMARCC2-209ENST00000550164 A8MUN3 132 aa6.67□□□□□ -1.34
SMARCC2-209ENST00000550164 CHTF8P0CG12 524 aa6.67□□□□□ -1.34
SMARCC2-209ENST00000550164 DNAH10OSP0CZ25 163 aa6.67□□□□□ -1.34
SMARCC2-209ENST00000550164 ZNF706Q9Y5V0 76 aaPredicted RBP6.66□□□□□ -1.34
SMARCC2-209ENST00000550164 IGFL1Q6UW32 110 aa6.65□□□□□ -1.34
SMARCC2-209ENST00000550164 OCR1Q9BZK8 76 aa6.65□□□□□ -1.34
SMARCC2-209ENST00000550164 NBEAL1Q6ZS30 2694 aa6.65□□□□□ -1.34
SMARCC2-209ENST00000550164 EPM2AB3EWF7 344 aa6.65□□□□□ -1.34
SMARCC2-209ENST00000550164 LIMD2Q9BT23 127 aa6.65□□□□□ -1.34
SMARCC2-209ENST00000550164 BAHCC1Q9P281 2608 aa6.64□□□□□ -1.35
SMARCC2-209ENST00000550164 C4orf48Q5BLP8 95 aa6.64□□□□□ -1.35
SMARCC2-209ENST00000550164 ITPR2Q14571 2701 aa6.64□□□□□ -1.35
SMARCC2-209ENST00000550164 CASC10Q5T4H9 136 aa6.64□□□□□ -1.35
SMARCC2-209ENST00000550164 CIRBP-AS1Q8TBR5 109 aa6.64□□□□□ -1.35
SMARCC2-209ENST00000550164 TRAV22A0A0B4J277 110 aa6.63□□□□□ -1.35
SMARCC2-209ENST00000550164 SEC61GP60059 68 aa6.63□□□□□ -1.35
SMARCC2-209ENST00000550164 MXRA5Q9NR99 2828 aa6.63□□□□□ -1.35
SMARCC2-209ENST00000550164 IGLV5-48A0A075B6I7 105 aa6.63□□□□□ -1.35
SMARCC2-209ENST00000550164 C16orf90A8MZG2 172 aa6.62□□□□□ -1.35
SMARCC2-209ENST00000550164 SPAG11AQ6PDA7 123 aa6.62□□□□□ -1.35
SMARCC2-209ENST00000550164 STAB1Q9NY15 2570 aa6.62□□□□□ -1.35
SMARCC2-209ENST00000550164 KRTAP10-11P60412 298 aa6.62□□□□□ -1.35
SMARCC2-209ENST00000550164 CELSR1Q9NYQ6 3014 aa6.62□□□□□ -1.35
SMARCC2-209ENST00000550164 RETNLBQ9BQ08 111 aa6.61□□□□□ -1.35
SMARCC2-209ENST00000550164 WIPF1O43516 503 aa6.61□□□□□ -1.35
SMARCC2-209ENST00000550164 FP248Q71RG6 208 aaPredicted RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms