RNA–Protein interactions for RNA: ENST00000550155.5

CNOT2-222, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 2

Gene CNOT2, Length 842 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-222	ENST00000550155	MAST1	Q9Y2H9	1570 aa		0.65	□□□□□ -2.31
CNOT2-222	ENST00000550155	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	0.65	□□□□□ -2.31
CNOT2-222	ENST00000550155	AKAP6	Q13023	2319 aa		0.65	□□□□□ -2.31
CNOT2-222	ENST00000550155	LMO7	Q8WWI1	1683 aa		0.65	□□□□□ -2.31
CNOT2-222	ENST00000550155	ARFGEF2	Q9Y6D5	1785 aa		0.65	□□□□□ -2.31
CNOT2-222	ENST00000550155	MAP1B	P46821	2468 aa	Known RBP	0.64	□□□□□ -2.31
CNOT2-222	ENST00000550155	ERICH3	Q5RHP9	1530 aa		0.64	□□□□□ -2.31
CNOT2-222	ENST00000550155	ABCA10	Q8WWZ4	1543 aa		0.64	□□□□□ -2.31
CNOT2-222	ENST00000550155	PIK3C2B	O00750	1634 aa		0.64	□□□□□ -2.31
CNOT2-222	ENST00000550155	USF3	Q68DE3	2245 aa		0.64	□□□□□ -2.31
CNOT2-222	ENST00000550155	LCE6A	A0A183	80 aa		0.64	□□□□□ -2.31
CNOT2-222	ENST00000550155	NREP	Q16612	68 aa		0.64	□□□□□ -2.31
CNOT2-222	ENST00000550155	HEPN1	Q6WQI6	88 aa		0.64	□□□□□ -2.31
CNOT2-222	ENST00000550155	BCOR	Q6W2J9	1755 aa		0.64	□□□□□ -2.31
CNOT2-222	ENST00000550155	PKDREJ	Q9NTG1	2253 aa		0.64	□□□□□ -2.31
CNOT2-222	ENST00000550155	WDR87	Q6ZQQ6	2873 aa		0.64	□□□□□ -2.31
CNOT2-222	ENST00000550155	C4B	P0C0L5	1744 aa		0.64	□□□□□ -2.31
CNOT2-222	ENST00000550155	IQGAP3	Q86VI3	1631 aa		0.64	□□□□□ -2.31
CNOT2-222	ENST00000550155	ATP7A	Q04656	1500 aa		0.64	□□□□□ -2.31
CNOT2-222	ENST00000550155	SYCP2	Q9BX26	1530 aa		0.64	□□□□□ -2.31
CNOT2-222	ENST00000550155	UGGT2	Q9NYU1	1516 aa		0.64	□□□□□ -2.31
CNOT2-222	ENST00000550155	MROH2B	Q7Z745	1585 aa		0.63	□□□□□ -2.31
CNOT2-222	ENST00000550155	INO80	Q9ULG1	1556 aa	Predicted RBP	0.63	□□□□□ -2.31
CNOT2-222	ENST00000550155	NCOR1	O75376	2440 aa		0.63	□□□□□ -2.31
CNOT2-222	ENST00000550155	MRPL33	O75394	65 aa	Known RBP	0.63	□□□□□ -2.31
CNOT2-222	ENST00000550155	SPRR1B	P22528	89 aa		0.63	□□□□□ -2.31
CNOT2-222	ENST00000550155	DEFB109B	Q30KR1	87 aa		0.63	□□□□□ -2.31
CNOT2-222	ENST00000550155	CDKN2A-AS1	Q9UH64	79 aa		0.63	□□□□□ -2.31
CNOT2-222	ENST00000550155	ANKRD36	A6QL64	1941 aa		0.63	□□□□□ -2.31
CNOT2-222	ENST00000550155	QSER1	Q2KHR3	1735 aa		0.63	□□□□□ -2.31
CNOT2-222	ENST00000550155	NRAP	Q86VF7	1730 aa		0.63	□□□□□ -2.31
CNOT2-222	ENST00000550155	CLTCL1	P53675	1640 aa		0.63	□□□□□ -2.31
CNOT2-222	ENST00000550155	TRPM2	O94759	1503 aa		0.63	□□□□□ -2.31
CNOT2-222	ENST00000550155	CLASP1	Q7Z460	1538 aa		0.63	□□□□□ -2.31
CNOT2-222	ENST00000550155	ZNF469	Q96JG9	3925 aa	Predicted RBP	0.63	□□□□□ -2.31
CNOT2-222	ENST00000550155	CHD9	Q3L8U1	2897 aa		0.63	□□□□□ -2.31
CNOT2-222	ENST00000550155		A0A1B0GUL6	1792 aa		0.62	□□□□□ -2.31
CNOT2-222	ENST00000550155	COL14A1	Q05707	1796 aa	Known RBP	0.62	□□□□□ -2.31
CNOT2-222	ENST00000550155	TIAM1	Q13009	1591 aa		0.62	□□□□□ -2.31
CNOT2-222	ENST00000550155	UGGT1	Q9NYU2	1555 aa		0.62	□□□□□ -2.31
CNOT2-222	ENST00000550155	EP400	Q96L91	3159 aa		0.62	□□□□□ -2.31
CNOT2-222	ENST00000550155	LY75	O60449	1722 aa		0.62	□□□□□ -2.31
CNOT2-222	ENST00000550155	CEP250	Q9BV73	2442 aa		0.62	□□□□□ -2.31
CNOT2-222	ENST00000550155		H3BVH4	76 aa		0.62	□□□□□ -2.31
CNOT2-222	ENST00000550155	SPRR1A	P35321	89 aa		0.62	□□□□□ -2.31
CNOT2-222	ENST00000550155	ATXN8	Q156A1	80 aa		0.62	□□□□□ -2.31
CNOT2-222	ENST00000550155	KRTAP19-3	Q7Z4W3	81 aa		0.62	□□□□□ -2.31
CNOT2-222	ENST00000550155	DEPDC5	O75140	1603 aa		0.62	□□□□□ -2.31
CNOT2-222	ENST00000550155	USP32	Q8NFA0	1604 aa		0.62	□□□□□ -2.31
CNOT2-222	ENST00000550155	CPS1	P31327	1500 aa		0.62	□□□□□ -2.31
CNOT2-222	ENST00000550155	EEA1	Q15075	1411 aa		0.62	□□□□□ -2.31
CNOT2-222	ENST00000550155	NHS	Q6T4R5	1651 aa		0.62	□□□□□ -2.31
CNOT2-222	ENST00000550155	PLXNC1	O60486	1568 aa		0.62	□□□□□ -2.31
CNOT2-222	ENST00000550155	DIP2A	Q14689	1571 aa		0.62	□□□□□ -2.31
CNOT2-222	ENST00000550155	GOLGB1	Q14789	3259 aa	Known RBP	0.62	□□□□□ -2.31
CNOT2-222	ENST00000550155	TJP1	Q07157	1748 aa		0.61	□□□□□ -2.31
CNOT2-222	ENST00000550155	MROH1	Q8NDA8	1641 aa		0.61	□□□□□ -2.31
CNOT2-222	ENST00000550155	EFCAB6	Q5THR3	1501 aa		0.61	□□□□□ -2.31
CNOT2-222	ENST00000550155	DEFB105A	Q8NG35	78 aa		0.61	□□□□□ -2.31
CNOT2-222	ENST00000550155	GVINP1	Q7Z2Y8	2422 aa		0.61	□□□□□ -2.31
CNOT2-222	ENST00000550155	GLI2	P10070	1586 aa		0.61	□□□□□ -2.31
CNOT2-222	ENST00000550155	SAMD9L	Q8IVG5	1584 aa		0.61	□□□□□ -2.31
CNOT2-222	ENST00000550155	CELSR2	Q9HCU4	2923 aa		0.61	□□□□□ -2.31
CNOT2-222	ENST00000550155	ZNF831	Q5JPB2	1677 aa		0.6	□□□□□ -2.31
CNOT2-222	ENST00000550155	CNOT1	A5YKK6	2376 aa	Known RBP	0.6	□□□□□ -2.31
CNOT2-222	ENST00000550155		A0A087WWC5	75 aa		0.6	□□□□□ -2.31
CNOT2-222	ENST00000550155	NDUFA4	O00483	81 aa		0.6	□□□□□ -2.31
CNOT2-222	ENST00000550155	C3orf79	P0CE67	100 aa		0.6	□□□□□ -2.31
CNOT2-222	ENST00000550155	GNG13	Q9P2W3	67 aa		0.6	□□□□□ -2.31
CNOT2-222	ENST00000550155	NWD1	Q149M9	1564 aa		0.6	□□□□□ -2.31
CNOT2-222	ENST00000550155	RALGAPB	Q86X10	1494 aa		0.6	□□□□□ -2.31
CNOT2-222	ENST00000550155	PRX	Q9BXM0	1461 aa		0.6	□□□□□ -2.31
CNOT2-222	ENST00000550155	CD163L1	Q9NR16	1453 aa		0.6	□□□□□ -2.31
CNOT2-222	ENST00000550155	TNC	P24821	2201 aa		0.6	□□□□□ -2.31
CNOT2-222	ENST00000550155	ZFYVE26	Q68DK2	2539 aa		0.6	□□□□□ -2.31
CNOT2-222	ENST00000550155	PCNT	O95613	3336 aa		0.59	□□□□□ -2.31
CNOT2-222	ENST00000550155	AGL	P35573	1532 aa		0.59	□□□□□ -2.31
CNOT2-222	ENST00000550155	PTPN13	Q12923	2485 aa		0.59	□□□□□ -2.31
CNOT2-222	ENST00000550155	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	0.59	□□□□□ -2.31	2e-6	■■■□□ 14.9
CNOT2-222	ENST00000550155	MUC5AC	P98088	5654 aa		0.59	□□□□□ -2.31
CNOT2-222	ENST00000550155	HFM1	A2PYH4	1435 aa		0.59	□□□□□ -2.31
CNOT2-222	ENST00000550155	S100Z	Q8WXG8	99 aa		0.59	□□□□□ -2.31
CNOT2-222	ENST00000550155	UBL5	Q9BZL1	73 aa		0.59	□□□□□ -2.31
CNOT2-222	ENST00000550155	FXYD6	Q9H0Q3	95 aa		0.59	□□□□□ -2.31
CNOT2-222	ENST00000550155	APLN	Q9ULZ1	77 aa		0.59	□□□□□ -2.31
CNOT2-222	ENST00000550155	SPTA1	P02549	2419 aa		0.59	□□□□□ -2.32
CNOT2-222	ENST00000550155	UTRN	P46939	3433 aa		0.59	□□□□□ -2.32
CNOT2-222	ENST00000550155	APC2	O95996	2303 aa		0.59	□□□□□ -2.32
CNOT2-222	ENST00000550155	KNL1	Q8NG31	2342 aa		0.59	□□□□□ -2.32
CNOT2-222	ENST00000550155	CACNA1A	O00555	2505 aa		0.59	□□□□□ -2.32
CNOT2-222	ENST00000550155	LMTK2	Q8IWU2	1503 aa		0.59	□□□□□ -2.32
CNOT2-222	ENST00000550155	ASXL1	Q8IXJ9	1541 aa		0.59	□□□□□ -2.32
CNOT2-222	ENST00000550155	SPTBN4	Q9H254	2564 aa		0.58	□□□□□ -2.32
CNOT2-222	ENST00000550155	DUOX1	Q9NRD9	1551 aa		0.58	□□□□□ -2.32
CNOT2-222	ENST00000550155	CENPF	P49454	3210 aa		0.58	□□□□□ -2.32
CNOT2-222	ENST00000550155	CIC	Q96RK0	1608 aa	Predicted RBP	0.58	□□□□□ -2.32
CNOT2-222	ENST00000550155	NRXN3	Q9Y4C0	1643 aa		0.58	□□□□□ -2.32
CNOT2-222	ENST00000550155	PRH1	P02810	166 aa		0.58	□□□□□ -2.32
CNOT2-222	ENST00000550155	SMR3A	Q99954	134 aa		0.58	□□□□□ -2.32
CNOT2-222	ENST00000550155		U3KQA8	63 aa		0.58	□□□□□ -2.32

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