RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 SMIM20Q8N5G0 67 aa5.81□□□□□ -1.48
TMEM116-209ENST00000550020 VWFP04275 2813 aa5.81□□□□□ -1.48
TMEM116-209ENST00000550020 NBEAL2Q6ZNJ1 2754 aa5.8□□□□□ -1.48
TMEM116-209ENST00000550020 SPRR1AP35321 89 aa5.8□□□□□ -1.48
TMEM116-209ENST00000550020 C9orf153Q5TBE3 101 aa5.8□□□□□ -1.48
TMEM116-209ENST00000550020 Q6ZVQ6 151 aa5.79□□□□□ -1.48
TMEM116-209ENST00000550020 SERP2Q8N6R1 65 aa5.79□□□□□ -1.48
TMEM116-209ENST00000550020 APLNQ9ULZ1 77 aa5.79□□□□□ -1.48
TMEM116-209ENST00000550020 C16orf90A8MZG2 172 aa5.78□□□□□ -1.48
TMEM116-209ENST00000550020 FUSP35637 526 aaKnown RBP eCLIP5.78□□□□□ -1.48
TMEM116-209ENST00000550020 LINC01547P58512 204 aaPredicted RBP5.78□□□□□ -1.48
TMEM116-209ENST00000550020 HAMPP81172 84 aa5.78□□□□□ -1.48
TMEM116-209ENST00000550020 CASC10Q5T4H9 136 aa5.77□□□□□ -1.49
TMEM116-209ENST00000550020 REG3GQ6UW15 175 aa5.77□□□□□ -1.49
TMEM116-209ENST00000550020 FAM19A5Q7Z5A7 132 aaPredicted RBP5.77□□□□□ -1.49
TMEM116-209ENST00000550020 LINC00474Q9P2X8 69 aa5.77□□□□□ -1.49
TMEM116-209ENST00000550020 IGLV5-48A0A075B6I7 105 aa5.76□□□□□ -1.49
TMEM116-209ENST00000550020 RPL37AP8A6NKH3 93 aa5.76□□□□□ -1.49
TMEM116-209ENST00000550020 KRTAP4-16G5E9R7 235 aaPredicted RBP5.76□□□□□ -1.49
TMEM116-209ENST00000550020 CRYGAP11844 174 aa5.76□□□□□ -1.49
TMEM116-209ENST00000550020 F8WEM9 126 aa5.75□□□□□ -1.49
TMEM116-209ENST00000550020 UBE2BP63146 152 aa5.75□□□□□ -1.49
TMEM116-209ENST00000550020 DEFB105AQ8NG35 78 aa5.75□□□□□ -1.49
TMEM116-209ENST00000550020 A0A087WVE0 104 aa5.74□□□□□ -1.49
TMEM116-209ENST00000550020 FAM168BA1KXE4 195 aa5.74□□□□□ -1.49
TMEM116-209ENST00000550020 NREPQ16612 68 aa5.74□□□□□ -1.49
TMEM116-209ENST00000550020 Q8N377 158 aa5.74□□□□□ -1.49
TMEM116-209ENST00000550020 NBDYA0A0U1RRE5 68 aa5.73□□□□□ -1.49
TMEM116-209ENST00000550020 FAM19A1Q7Z5A9 133 aa5.73□□□□□ -1.49
TMEM116-209ENST00000550020 Q9BRP9 147 aa5.72□□□□□ -1.49
TMEM116-209ENST00000550020 SS18L2Q9UHA2 77 aa5.72□□□□□ -1.49
TMEM116-209ENST00000550020 TRAV7A0A075B6U4 112 aa5.71□□□□□ -1.5
TMEM116-209ENST00000550020 A0A096LNI7 61 aa5.71□□□□□ -1.5
TMEM116-209ENST00000550020 H0Y9J4 135 aa5.71□□□□□ -1.5
TMEM116-209ENST00000550020 C1orf137Q5JT78 98 aa5.71□□□□□ -1.5
TMEM116-209ENST00000550020 MDFIQ99750 246 aa5.71□□□□□ -1.5
TMEM116-209ENST00000550020 IGKV2-24A0A0C4DH68 120 aa5.7□□□□□ -1.5
TMEM116-209ENST00000550020 M0R2N4 97 aa5.7□□□□□ -1.5
TMEM116-209ENST00000550020 BPY2O14599 106 aa5.7□□□□□ -1.5
TMEM116-209ENST00000550020 KRTAP7-1Q8IUC3 87 aa5.7□□□□□ -1.5
TMEM116-209ENST00000550020 C9orf163Q8N9P6 203 aa5.7□□□□□ -1.5
TMEM116-209ENST00000550020 KRTAP1-5Q9BYS1 174 aa5.7□□□□□ -1.5
TMEM116-209ENST00000550020 TNP2Q05952 138 aa5.69□□□□□ -1.5
TMEM116-209ENST00000550020 Q8NBF4 154 aa5.69□□□□□ -1.5
TMEM116-209ENST00000550020 FBN1P35555 2871 aaKnown RBP5.68□□□□□ -1.5
TMEM116-209ENST00000550020 TMEM258P61165 79 aa5.68□□□□□ -1.5
TMEM116-209ENST00000550020 BAHCC1Q9P281 2608 aa5.67□□□□□ -1.5
TMEM116-209ENST00000550020 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.67□□□□□ -1.5
TMEM116-209ENST00000550020 SPRR4Q96PI1 79 aa5.67□□□□□ -1.5
TMEM116-209ENST00000550020 MAST4O15021 2626 aa5.67□□□□□ -1.5
TMEM116-209ENST00000550020 LRCOL1A6NCL2 159 aa5.66□□□□□ -1.5
TMEM116-209ENST00000550020 ST20-AS1Q8NBB2 130 aa5.66□□□□□ -1.5
TMEM116-209ENST00000550020 IGLV8-61A0A075B6I0 122 aa5.65□□□□□ -1.5
TMEM116-209ENST00000550020 A0A1W2PNN7 141 aa5.65□□□□□ -1.5
TMEM116-209ENST00000550020 C3orf84H3BNL1 204 aa5.65□□□□□ -1.5
TMEM116-209ENST00000550020 ERC2-IT1O76042 136 aa5.65□□□□□ -1.5
TMEM116-209ENST00000550020 UBE2AP49459 152 aa5.65□□□□□ -1.5
TMEM116-209ENST00000550020 DPH3Q96FX2 82 aa5.65□□□□□ -1.5
TMEM116-209ENST00000550020 STAB1Q9NY15 2570 aa5.64□□□□□ -1.51
TMEM116-209ENST00000550020 A0A1W2PNM2 257 aa5.64□□□□□ -1.51
TMEM116-209ENST00000550020 NDUFC1O43677 76 aa5.64□□□□□ -1.51
TMEM116-209ENST00000550020 SPRR1BP22528 89 aa5.64□□□□□ -1.51
TMEM116-209ENST00000550020 SCXQ7RTU7 201 aa5.64□□□□□ -1.51
TMEM116-209ENST00000550020 HIGD2AQ9BW72 106 aa5.64□□□□□ -1.51
TMEM116-209ENST00000550020 RPS28P62857 69 aaKnown RBP5.63□□□□□ -1.51
TMEM116-209ENST00000550020 PRLHP81277 87 aa5.63□□□□□ -1.51
TMEM116-209ENST00000550020 Q6ZRN7 208 aaPredicted RBP5.63□□□□□ -1.51
TMEM116-209ENST00000550020 LINC00476Q8WZB0 136 aa5.63□□□□□ -1.51
TMEM116-209ENST00000550020 FLNBO75369 2602 aaKnown RBP5.63□□□□□ -1.51
TMEM116-209ENST00000550020 J3KT08 172 aa5.62□□□□□ -1.51
TMEM116-209ENST00000550020 IGKV4-1P06312 121 aa5.62□□□□□ -1.51
TMEM116-209ENST00000550020 PHF5AQ7RTV0 110 aaKnown RBP5.62□□□□□ -1.51
TMEM116-209ENST00000550020 SMIM29Q86T20 159 aa5.62□□□□□ -1.51
TMEM116-209ENST00000550020 EPM2AB3EWF7 344 aa5.61□□□□□ -1.51
TMEM116-209ENST00000550020 KLKP1Q107X0 134 aa5.61□□□□□ -1.51
TMEM116-209ENST00000550020 C20orf197Q8N268 126 aa5.61□□□□□ -1.51
TMEM116-209ENST00000550020 TENM3Q9P273 2699 aa5.61□□□□□ -1.51
TMEM116-209ENST00000550020 ZNF706Q9Y5V0 76 aaPredicted RBP5.61□□□□□ -1.51
TMEM116-209ENST00000550020 A0A087WTM6 91 aa5.6□□□□□ -1.51
TMEM116-209ENST00000550020 CHTF8P0CG12 524 aa5.6□□□□□ -1.51
TMEM116-209ENST00000550020 IGFL1Q6UW32 110 aa5.59□□□□□ -1.51
TMEM116-209ENST00000550020 SPACA4Q8TDM5 124 aa5.59□□□□□ -1.51
TMEM116-209ENST00000550020 ATP5EP56381 51 aaPredicted RBP5.58□□□□□ -1.52
TMEM116-209ENST00000550020 RPL37AP61513 92 aaKnown RBP5.58□□□□□ -1.52
TMEM116-209ENST00000550020 COL6A5A8TX70 2615 aa5.57□□□□□ -1.52
TMEM116-209ENST00000550020 TRRAPQ9Y4A5 3859 aa5.57□□□□□ -1.52
TMEM116-209ENST00000550020 RTL8CO15255 209 aa5.56□□□□□ -1.52
TMEM116-209ENST00000550020 C1orf134Q5TEV5 83 aa5.56□□□□□ -1.52
TMEM116-209ENST00000550020 Q6ZR54 194 aa5.56□□□□□ -1.52
TMEM116-209ENST00000550020 Q8N9L7 120 aa5.56□□□□□ -1.52
TMEM116-209ENST00000550020 PKD1L1Q8TDX9 2849 aa5.55□□□□□ -1.52
TMEM116-209ENST00000550020 FAM236DA0A1B0GTK5 79 aa5.55□□□□□ -1.52
TMEM116-209ENST00000550020 FAM236CP0DP71 79 aa5.55□□□□□ -1.52
TMEM116-209ENST00000550020 TMEM254Q8TBM7 123 aa5.55□□□□□ -1.52
TMEM116-209ENST00000550020 A0A087WSZ3 146 aa5.54□□□□□ -1.52
TMEM116-209ENST00000550020 HCG22E2RYF7 251 aa5.54□□□□□ -1.52
TMEM116-209ENST00000550020 KRTAP13-1Q8IUC0 172 aa5.54□□□□□ -1.52
TMEM116-209ENST00000550020 OCR1Q9BZK8 76 aa5.54□□□□□ -1.52
TMEM116-209ENST00000550020 NOTCH1P46531 2555 aa5.54□□□□□ -1.52
TMEM116-209ENST00000550020 IGLV5-52A0A0A0MRZ9 124 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms