RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 DEFB105AQ8NG35 78 aa0.46□□□□□ -2.34
CCDC38-208ENST00000549876 CDKN2A-AS1Q9UH64 79 aa0.46□□□□□ -2.34
CCDC38-208ENST00000549876 ASXL1Q8IXJ9 1541 aa0.46□□□□□ -2.34
CCDC38-208ENST00000549876 DDX60LQ5H9U9 1706 aaKnown RBP0.46□□□□□ -2.34
CCDC38-208ENST00000549876 RICTORQ6R327 1708 aa0.46□□□□□ -2.34
CCDC38-208ENST00000549876 RALGAPBQ86X10 1494 aa0.46□□□□□ -2.34
CCDC38-208ENST00000549876 PIEZO2Q9H5I5 2752 aa0.45□□□□□ -2.34
CCDC38-208ENST00000549876 PKDREJQ9NTG1 2253 aa0.45□□□□□ -2.34
CCDC38-208ENST00000549876 THOC2Q8NI27 1593 aaKnown RBP0.45□□□□□ -2.34
CCDC38-208ENST00000549876 A0A087WWC5 75 aa0.45□□□□□ -2.34
CCDC38-208ENST00000549876 APLNQ9ULZ1 77 aa0.45□□□□□ -2.34
CCDC38-208ENST00000549876 HFM1A2PYH4 1435 aa0.45□□□□□ -2.34
CCDC38-208ENST00000549876 TPRP12270 2363 aaKnown RBP0.45□□□□□ -2.34
CCDC38-208ENST00000549876 CNOT1A5YKK6 2376 aaKnown RBP0.44□□□□□ -2.34
CCDC38-208ENST00000549876 MRPL33O75394 65 aaKnown RBP0.44□□□□□ -2.34
CCDC38-208ENST00000549876 CCDC180Q9P1Z9 1646 aa0.43□□□□□ -2.34
CCDC38-208ENST00000549876 ZNF292O60281 2723 aa0.43□□□□□ -2.34
CCDC38-208ENST00000549876 CHD9Q3L8U1 2897 aa0.43□□□□□ -2.34
CCDC38-208ENST00000549876 C3orf79P0CE67 100 aa0.43□□□□□ -2.34
CCDC38-208ENST00000549876 UBL5Q9BZL1 73 aa0.43□□□□□ -2.34
CCDC38-208ENST00000549876 FXYD6Q9H0Q3 95 aa0.43□□□□□ -2.34
CCDC38-208ENST00000549876 GNG13Q9P2W3 67 aa0.43□□□□□ -2.34
CCDC38-208ENST00000549876 U3KQA8 63 aa0.43□□□□□ -2.34
CCDC38-208ENST00000549876 SPTBN1Q01082 2364 aaKnown RBP0.43□□□□□ -2.34
CCDC38-208ENST00000549876 NRAPQ86VF7 1730 aa0.43□□□□□ -2.34
CCDC38-208ENST00000549876 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.43□□□□□ -2.34
CCDC38-208ENST00000549876 MADDQ8WXG6 1647 aa0.42□□□□□ -2.34
CCDC38-208ENST00000549876 ANK2Q01484 3957 aa0.42□□□□□ -2.34
CCDC38-208ENST00000549876 DIP2AQ14689 1571 aa0.42□□□□□ -2.34
CCDC38-208ENST00000549876 DEFB131BA0A096LNP1 70 aa0.42□□□□□ -2.34
CCDC38-208ENST00000549876 H1FX-AS1Q4G0G2 97 aa0.42□□□□□ -2.34
CCDC38-208ENST00000549876 S100ZQ8WXG8 99 aa0.42□□□□□ -2.34
CCDC38-208ENST00000549876 KCNQ1DNQ9H478 68 aa0.42□□□□□ -2.34
CCDC38-208ENST00000549876 HILPDAQ9Y5L2 63 aa0.42□□□□□ -2.34
CCDC38-208ENST00000549876 MUC5BQ9HC84 5762 aaPredicted RBP0.42□□□□□ -2.34
CCDC38-208ENST00000549876 TJP1Q07157 1748 aa0.41□□□□□ -2.34
CCDC38-208ENST00000549876 RNF17Q9BXT8 1623 aaKnown RBP0.41□□□□□ -2.34
CCDC38-208ENST00000549876 C4AP0C0L4 1744 aa0.41□□□□□ -2.34
CCDC38-208ENST00000549876 C4BP0C0L5 1744 aa0.41□□□□□ -2.34
CCDC38-208ENST00000549876 AKAP6Q13023 2319 aa0.41□□□□□ -2.34
CCDC38-208ENST00000549876 TIAM1Q13009 1591 aa0.4□□□□□ -2.34
CCDC38-208ENST00000549876 DEPDC5O75140 1603 aa0.4□□□□□ -2.35
CCDC38-208ENST00000549876 DEFB114Q30KQ6 69 aa0.4□□□□□ -2.35
CCDC38-208ENST00000549876 ENHOQ6UWT2 76 aa0.4□□□□□ -2.35
CCDC38-208ENST00000549876 PRO3102Q9H379 93 aa0.4□□□□□ -2.35
CCDC38-208ENST00000549876 PIEZO1Q92508 2521 aa0.39□□□□□ -2.35
CCDC38-208ENST00000549876 AHNAKQ09666 5890 aaKnown RBP0.39□□□□□ -2.35
CCDC38-208ENST00000549876 PHGR1C9JFL3 82 aa0.39□□□□□ -2.35
CCDC38-208ENST00000549876 NDUFA3O95167 84 aa0.39□□□□□ -2.35
CCDC38-208ENST00000549876 KLK9Q2XQG4 91 aa0.39□□□□□ -2.35
CCDC38-208ENST00000549876 KRTAP21-1Q3LI58 79 aa0.39□□□□□ -2.35
CCDC38-208ENST00000549876 WFDC13Q8IUB5 93 aa0.39□□□□□ -2.35
CCDC38-208ENST00000549876 PLXNC1O60486 1568 aa0.39□□□□□ -2.35
CCDC38-208ENST00000549876 MDN1Q9NU22 5596 aa0.39□□□□□ -2.35
CCDC38-208ENST00000549876 C3P01024 1663 aa0.38□□□□□ -2.35
CCDC38-208ENST00000549876 WNK2Q9Y3S1 2297 aa0.38□□□□□ -2.35
CCDC38-208ENST00000549876 GVINP1Q7Z2Y8 2422 aa0.37□□□□□ -2.35
CCDC38-208ENST00000549876 CSMD3Q7Z407 3707 aa0.37□□□□□ -2.35
CCDC38-208ENST00000549876 HUWE1Q7Z6Z7 4374 aaKnown RBP0.37□□□□□ -2.35
CCDC38-208ENST00000549876 ETDCA0A1B0GVM5 59 aa0.37□□□□□ -2.35
CCDC38-208ENST00000549876 LINC00158P58513 81 aa0.37□□□□□ -2.35
CCDC38-208ENST00000549876 SMIM5Q71RC9 77 aa0.37□□□□□ -2.35
CCDC38-208ENST00000549876 VWFP04275 2813 aa0.36□□□□□ -2.35
CCDC38-208ENST00000549876 ABCA6Q8N139 1617 aa0.36□□□□□ -2.35
CCDC38-208ENST00000549876 LINC01549A6NIU2 74 aa0.36□□□□□ -2.35
CCDC38-208ENST00000549876 LELP1Q5T871 98 aa0.36□□□□□ -2.35
CCDC38-208ENST00000549876 ABCA10Q8WWZ4 1543 aa0.36□□□□□ -2.35
CCDC38-208ENST00000549876 TENM4Q6N022 2769 aa0.36□□□□□ -2.35
CCDC38-208ENST00000549876 IGF2RP11717 2491 aa0.36□□□□□ -2.35
CCDC38-208ENST00000549876 LRP1Q07954 4544 aaKnown RBP0.35□□□□□ -2.35
CCDC38-208ENST00000549876 ABCC6O95255 1503 aa0.35□□□□□ -2.35
CCDC38-208ENST00000549876 CSPG4Q6UVK1 2322 aa0.35□□□□□ -2.35
CCDC38-208ENST00000549876 LYNX1G3V0Z9 82 aa0.35□□□□□ -2.35
CCDC38-208ENST00000549876 LY75O60449 1722 aa0.35□□□□□ -2.35
CCDC38-208ENST00000549876 OTOGQ6ZRI0 2925 aa0.34□□□□□ -2.35
CCDC38-208ENST00000549876 NCOR1O75376 2440 aa0.34□□□□□ -2.35
CCDC38-208ENST00000549876 BPTFQ12830 3046 aa0.34□□□□□ -2.35
CCDC38-208ENST00000549876 LOC730098B7Z3J9 87 aa0.34□□□□□ -2.36
CCDC38-208ENST00000549876 K7EMI3 77 aa0.34□□□□□ -2.36
CCDC38-208ENST00000549876 SFTA3P0C7M3 94 aa0.34□□□□□ -2.36
CCDC38-208ENST00000549876 PRKDCP78527 4128 aaKnown RBP0.34□□□□□ -2.36
CCDC38-208ENST00000549876 SERF2P84101 59 aa0.34□□□□□ -2.36
CCDC38-208ENST00000549876 MAST1Q9Y2H9 1570 aa0.34□□□□□ -2.36
CCDC38-208ENST00000549876 MYCBP2O75592 4640 aa0.34□□□□□ -2.36
CCDC38-208ENST00000549876 KIAA0586Q9BVV6 1533 aa0.33□□□□□ -2.36
CCDC38-208ENST00000549876 USP24Q9UPU5 2620 aa0.33□□□□□ -2.36
CCDC38-208ENST00000549876 FAT2Q9NYQ8 4349 aa0.33□□□□□ -2.36
CCDC38-208ENST00000549876 H0YAA0 97 aa0.33□□□□□ -2.36
CCDC38-208ENST00000549876 KIF1AQ12756 1690 aa0.33□□□□□ -2.36
CCDC38-208ENST00000549876 ALS2Q96Q42 1657 aa0.33□□□□□ -2.36
CCDC38-208ENST00000549876 SPTA1P02549 2419 aa0.33□□□□□ -2.36
CCDC38-208ENST00000549876 BSNQ9UPA5 3926 aa0.32□□□□□ -2.36
CCDC38-208ENST00000549876 M0R2T5 61 aa0.32□□□□□ -2.36
CCDC38-208ENST00000549876 CRIP1P50238 77 aa0.32□□□□□ -2.36
CCDC38-208ENST00000549876 NAV2Q8IVL1 2488 aa0.32□□□□□ -2.36
CCDC38-208ENST00000549876 ZFYVE26Q68DK2 2539 aa0.32□□□□□ -2.36
CCDC38-208ENST00000549876 KNL1Q8NG31 2342 aa0.32□□□□□ -2.36
CCDC38-208ENST00000549876 EEA1Q15075 1411 aa0.31□□□□□ -2.36
CCDC38-208ENST00000549876 SYNE1Q8NF91 8797 aaKnown RBP0.31□□□□□ -2.36
CCDC38-208ENST00000549876 UNC79Q9P2D8 2635 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms