RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 COPS9Q8WXC6 57 aa5.03□□□□□ -1.6
TROAP-208ENST00000548817 GEMIN7Q9H840 131 aaKnown RBP5.03□□□□□ -1.6
TROAP-208ENST00000548817 XAGE1AQ9HD64 81 aa5.03□□□□□ -1.6
TROAP-208ENST00000548817 TMEM238C9JI98 176 aa5.02□□□□□ -1.61
TROAP-208ENST00000548817 J3QQQ9 107 aa5.02□□□□□ -1.61
TROAP-208ENST00000548817 HERVK_113P63121 156 aa5.02□□□□□ -1.61
TROAP-208ENST00000548817 Q8IZM0 81 aa5.02□□□□□ -1.61
TROAP-208ENST00000548817 TYMSOSQ8TAI1 123 aa5.02□□□□□ -1.61
TROAP-208ENST00000548817 BCE1O60756 84 aa5.01□□□□□ -1.61
TROAP-208ENST00000548817 CXCL5P42830 114 aa5.01□□□□□ -1.61
TROAP-208ENST00000548817 MRPL55Q7Z7F7 128 aaKnown RBP5.01□□□□□ -1.61
TROAP-208ENST00000548817 TMEM223A0PJW6 202 aa5□□□□□ -1.61
TROAP-208ENST00000548817 PCP4P48539 62 aa5□□□□□ -1.61
TROAP-208ENST00000548817 AMELXQ99217 191 aa5□□□□□ -1.61
TROAP-208ENST00000548817 TTTY13Q9BZ97 58 aa5□□□□□ -1.61
TROAP-208ENST00000548817 TINCRA0A1B0GVN0 87 aa4.99□□□□□ -1.61
TROAP-208ENST00000548817 UBE2AP49459 152 aa4.99□□□□□ -1.61
TROAP-208ENST00000548817 NKAPP1Q8N9T2 125 aa4.99□□□□□ -1.61
TROAP-208ENST00000548817 LINC00167Q96N53 147 aa4.99□□□□□ -1.61
TROAP-208ENST00000548817 CDKN2A-AS1Q9UH64 79 aa4.99□□□□□ -1.61
TROAP-208ENST00000548817 PRO1854Q9UHT4 67 aa4.99□□□□□ -1.61
TROAP-208ENST00000548817 A0A0B4J2C4 111 aa4.98□□□□□ -1.61
TROAP-208ENST00000548817 RPL37AP8A6NKH3 93 aa4.98□□□□□ -1.61
TROAP-208ENST00000548817 TIMM17BO60830 172 aa4.98□□□□□ -1.61
TROAP-208ENST00000548817 COX6CP09669 75 aa4.98□□□□□ -1.61
TROAP-208ENST00000548817 SCGB1C2P0DMR2 95 aa4.98□□□□□ -1.61
TROAP-208ENST00000548817 IFITM1P13164 125 aa4.98□□□□□ -1.61
TROAP-208ENST00000548817 FAM19A3Q7Z5A8 133 aa4.98□□□□□ -1.61
TROAP-208ENST00000548817 CDIP1Q9H305 208 aa4.98□□□□□ -1.61
TROAP-208ENST00000548817 ERG28Q9UKR5 140 aa4.98□□□□□ -1.61
TROAP-208ENST00000548817 A0A087X002 238 aa4.97□□□□□ -1.61
TROAP-208ENST00000548817 LOC107984156A0A0G2JMH3 177 aa4.97□□□□□ -1.61
TROAP-208ENST00000548817 A0A0J9YXY3 114 aa4.97□□□□□ -1.61
TROAP-208ENST00000548817 K7ERJ3 54 aa4.97□□□□□ -1.61
TROAP-208ENST00000548817 ZNF22P17026 224 aaPredicted RBP4.97□□□□□ -1.61
TROAP-208ENST00000548817 TPRXLQ17RH7 258 aa4.97□□□□□ -1.61
TROAP-208ENST00000548817 ARL17AQ8IVW1 177 aa4.97□□□□□ -1.61
TROAP-208ENST00000548817 COX7B2Q8TF08 81 aa4.97□□□□□ -1.61
TROAP-208ENST00000548817 NAA38Q9BRA0 125 aaKnown RBP4.97□□□□□ -1.61
TROAP-208ENST00000548817 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.96□□□□□ -1.62
TROAP-208ENST00000548817 H3BMG7 143 aa4.96□□□□□ -1.62
TROAP-208ENST00000548817 SCGB1A1P11684 91 aa4.96□□□□□ -1.62
TROAP-208ENST00000548817 PSMB2P49721 201 aa4.96□□□□□ -1.62
TROAP-208ENST00000548817 FAM229BQ4G0N7 80 aa4.96□□□□□ -1.62
TROAP-208ENST00000548817 LINC00304Q8N9R0 145 aa4.96□□□□□ -1.62
TROAP-208ENST00000548817 SPANXDQ9BXN6 97 aa4.96□□□□□ -1.62
TROAP-208ENST00000548817 SPANXCQ9NY87 97 aa4.96□□□□□ -1.62
TROAP-208ENST00000548817 ANAPC11Q9NYG5 84 aa4.95□□□□□ -1.62
TROAP-208ENST00000548817 NDUFA12Q9UI09 145 aa4.95□□□□□ -1.62
TROAP-208ENST00000548817 CFC1BP0CG36 223 aa4.94□□□□□ -1.62
TROAP-208ENST00000548817 CFC1P0CG37 223 aa4.94□□□□□ -1.62
TROAP-208ENST00000548817 HERV-K104P63124 156 aa4.94□□□□□ -1.62
TROAP-208ENST00000548817 ATXN8Q156A1 80 aa4.94□□□□□ -1.62
TROAP-208ENST00000548817 Q1RN00 199 aa4.94□□□□□ -1.62
TROAP-208ENST00000548817 SFTA2Q6UW10 78 aa4.94□□□□□ -1.62
TROAP-208ENST00000548817 SIGMAR1Q99720 223 aa4.94□□□□□ -1.62
TROAP-208ENST00000548817 RETNLBQ9BQ08 111 aa4.94□□□□□ -1.62
TROAP-208ENST00000548817 PPDPFQ9H3Y8 114 aa4.94□□□□□ -1.62
TROAP-208ENST00000548817 IGLV7-46A0A075B6I9 117 aa4.93□□□□□ -1.62
TROAP-208ENST00000548817 IGLV5-37A0A075B6J1 123 aa4.93□□□□□ -1.62
TROAP-208ENST00000548817 IGKV2-28A0A075B6P5 120 aa4.93□□□□□ -1.62
TROAP-208ENST00000548817 SMIM1B2RUZ4 78 aa4.93□□□□□ -1.62
TROAP-208ENST00000548817 IGKV2D-28P01615 120 aa4.93□□□□□ -1.62
TROAP-208ENST00000548817 FAM19A1Q7Z5A9 133 aa4.93□□□□□ -1.62
TROAP-208ENST00000548817 PPDPFLQ8WWR9 84 aa4.93□□□□□ -1.62
TROAP-208ENST00000548817 IGLV5-45A0A087WSX0 123 aa4.92□□□□□ -1.62
TROAP-208ENST00000548817 A4D1N5 150 aa4.92□□□□□ -1.62
TROAP-208ENST00000548817 SPINK8P0C7L1 97 aa4.92□□□□□ -1.62
TROAP-208ENST00000548817 TSPEAR-AS2P59090 65 aa4.92□□□□□ -1.62
TROAP-208ENST00000548817 KRTAP13-2Q52LG2 175 aa4.92□□□□□ -1.62
TROAP-208ENST00000548817 MUSTN1Q8IVN3 82 aa4.92□□□□□ -1.62
TROAP-208ENST00000548817 MTURNQ8N3F0 131 aa4.92□□□□□ -1.62
TROAP-208ENST00000548817 PFN2P35080 140 aa4.91□□□□□ -1.62
TROAP-208ENST00000548817 ETDBQ3ZM63 59 aa4.91□□□□□ -1.62
TROAP-208ENST00000548817 C4orf48Q5BLP8 95 aa4.91□□□□□ -1.62
TROAP-208ENST00000548817 TEN1Q86WV5 123 aa4.91□□□□□ -1.62
TROAP-208ENST00000548817 PRLHP81277 87 aa4.9□□□□□ -1.63
TROAP-208ENST00000548817 KRTAP13-1Q8IUC0 172 aa4.9□□□□□ -1.63
TROAP-208ENST00000548817 PRO0461Q9UI25 63 aa4.9□□□□□ -1.63
TROAP-208ENST00000548817 IGLV5-39A0A0G2JS06 123 aa4.89□□□□□ -1.63
TROAP-208ENST00000548817 SPAG11AQ6PDA7 123 aa4.89□□□□□ -1.63
TROAP-208ENST00000548817 LINC00337Q8N6G1 96 aa4.89□□□□□ -1.63
TROAP-208ENST00000548817 TMEM126AQ9H061 195 aa4.89□□□□□ -1.63
TROAP-208ENST00000548817 H3BT86 120 aa4.88□□□□□ -1.63
TROAP-208ENST00000548817 SLC25A20O43772 301 aa4.88□□□□□ -1.63
TROAP-208ENST00000548817 TCL1BO95988 128 aa4.88□□□□□ -1.63
TROAP-208ENST00000548817 COX17Q14061 63 aa4.88□□□□□ -1.63
TROAP-208ENST00000548817 SND1-IT1Q9HBX3 110 aa4.88□□□□□ -1.63
TROAP-208ENST00000548817 TRAV13-2A0A0B4J235 113 aa4.87□□□□□ -1.63
TROAP-208ENST00000548817 TRBV10-2A0A0K0K1G8 114 aa4.87□□□□□ -1.63
TROAP-208ENST00000548817 C9JAW5 83 aa4.87□□□□□ -1.63
TROAP-208ENST00000548817 ASB16-AS1Q495Z4 193 aa4.87□□□□□ -1.63
TROAP-208ENST00000548817 MEIG1Q5JSS6 88 aa4.87□□□□□ -1.63
TROAP-208ENST00000548817 ANKRD29Q8N6D5 301 aa4.87□□□□□ -1.63
TROAP-208ENST00000548817 HIGD2AQ9BW72 106 aa4.87□□□□□ -1.63
TROAP-208ENST00000548817 ZNF706Q9Y5V0 76 aaPredicted RBP4.87□□□□□ -1.63
TROAP-208ENST00000548817 H7C2G1 150 aa4.86□□□□□ -1.63
TROAP-208ENST00000548817 VPREB1P12018 145 aa4.86□□□□□ -1.63
TROAP-208ENST00000548817 FP248Q71RG6 208 aaPredicted RBP4.86□□□□□ -1.63
TROAP-208ENST00000548817 C3orf22Q8N5N4 141 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms