RNA–Protein interactions for RNA: ENST00000548560.1

SP1-203, Transcript of Sp1 transcription factor, humanhuman

TSL 2

Gene SP1, Length 1,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-203ENST00000548560 KRTAP4-11Q9BYQ6 195 aa5.3□□□□□ -1.56
SP1-203ENST00000548560 NPC2P61916 151 aa5.29□□□□□ -1.56
SP1-203ENST00000548560 SCGB1D4Q6XE38 83 aa5.29□□□□□ -1.56
SP1-203ENST00000548560 FAM19A1Q7Z5A9 133 aa5.29□□□□□ -1.56
SP1-203ENST00000548560 Q8NDZ9 215 aa5.29□□□□□ -1.56
SP1-203ENST00000548560 LINC01600Q96MT4 127 aa5.29□□□□□ -1.56
SP1-203ENST00000548560 HMCN2Q8NDA2 5059 aa5.29□□□□□ -1.56
SP1-203ENST00000548560 LOC107984156A0A0G2JMH3 177 aa5.28□□□□□ -1.56
SP1-203ENST00000548560 TMEM238C9JI98 176 aa5.28□□□□□ -1.56
SP1-203ENST00000548560 TIMM17BO60830 172 aa5.28□□□□□ -1.56
SP1-203ENST00000548560 ARL17AQ8IVW1 177 aa5.28□□□□□ -1.56
SP1-203ENST00000548560 MPLKIPQ8TAP9 179 aa5.28□□□□□ -1.56
SP1-203ENST00000548560 TMEM126AQ9H061 195 aa5.28□□□□□ -1.56
SP1-203ENST00000548560 SPANXB1Q9NS25 103 aaPredicted RBP5.28□□□□□ -1.56
SP1-203ENST00000548560 TRBV10-2A0A0K0K1G8 114 aa5.27□□□□□ -1.57
SP1-203ENST00000548560 C5orf52A6NGY3 159 aa5.27□□□□□ -1.57
SP1-203ENST00000548560 NDUFC2O95298 119 aa5.27□□□□□ -1.57
SP1-203ENST00000548560 S100A7L2Q5SY68 101 aa5.27□□□□□ -1.57
SP1-203ENST00000548560 FAT3Q8TDW7 4589 aa5.27□□□□□ -1.57
SP1-203ENST00000548560 COPS9Q8WXC6 57 aa5.27□□□□□ -1.57
SP1-203ENST00000548560 TTTY13Q9BZ97 58 aa5.27□□□□□ -1.57
SP1-203ENST00000548560 MT1HL1P0DM35 61 aa5.26□□□□□ -1.57
SP1-203ENST00000548560 DDTP30046 118 aa5.26□□□□□ -1.57
SP1-203ENST00000548560 PRLHP81277 87 aa5.26□□□□□ -1.57
SP1-203ENST00000548560 ADAMTSL4-AS1Q5T5F5 129 aa5.26□□□□□ -1.57
SP1-203ENST00000548560 TRBV10-3A0A0K0K1G6 114 aa5.25□□□□□ -1.57
SP1-203ENST00000548560 ETDCA0A1B0GVM5 59 aa5.25□□□□□ -1.57
SP1-203ENST00000548560 SOSTDC1Q6X4U4 206 aa5.25□□□□□ -1.57
SP1-203ENST00000548560 LINC00308Q8TCZ7 52 aa5.25□□□□□ -1.57
SP1-203ENST00000548560 LITAFQ99732 161 aa5.25□□□□□ -1.57
SP1-203ENST00000548560 SPANXCQ9NY87 97 aa5.25□□□□□ -1.57
SP1-203ENST00000548560 CBY1Q9Y3M2 126 aa5.25□□□□□ -1.57
SP1-203ENST00000548560 UBR4Q5T4S7 5183 aa5.25□□□□□ -1.57
SP1-203ENST00000548560 RPL13AP40429 203 aaKnown RBP5.24□□□□□ -1.57
SP1-203ENST00000548560 UBE2V1Q13404 147 aa5.24□□□□□ -1.57
SP1-203ENST00000548560 PCP2Q8IVA1 136 aa5.24□□□□□ -1.57
SP1-203ENST00000548560 SPANXDQ9BXN6 97 aa5.24□□□□□ -1.57
SP1-203ENST00000548560 KCNQ1DNQ9H478 68 aa5.24□□□□□ -1.57
SP1-203ENST00000548560 Q6ZVH6 145 aa5.23□□□□□ -1.57
SP1-203ENST00000548560 KRTAP13-1Q8IUC0 172 aa5.23□□□□□ -1.57
SP1-203ENST00000548560 LINC00337Q8N6G1 96 aa5.23□□□□□ -1.57
SP1-203ENST00000548560 PRR26Q8N8Z3 221 aa5.23□□□□□ -1.57
SP1-203ENST00000548560 HIGD2AQ9BW72 106 aa5.23□□□□□ -1.57
SP1-203ENST00000548560 TRAV23DV6A0A075B6W5 121 aa5.22□□□□□ -1.57
SP1-203ENST00000548560 KRTAP1-4P0C5Y4 121 aa5.22□□□□□ -1.57
SP1-203ENST00000548560 IFITM1P13164 125 aa5.22□□□□□ -1.57
SP1-203ENST00000548560 SPRR1AP35321 89 aa5.22□□□□□ -1.57
SP1-203ENST00000548560 LINC00518Q8N0U6 118 aa5.22□□□□□ -1.57
SP1-203ENST00000548560 OR13C6PQ8NH95 151 aa5.22□□□□□ -1.57
SP1-203ENST00000548560 IGLV6-57P01721 117 aa5.21□□□□□ -1.58
SP1-203ENST00000548560 HINT1P49773 126 aaPredicted RBP5.21□□□□□ -1.58
SP1-203ENST00000548560 KRTAP10-8P60410 259 aa5.21□□□□□ -1.58
SP1-203ENST00000548560 SEC61BP60468 96 aaKnown RBP5.21□□□□□ -1.58
SP1-203ENST00000548560 LCE5AQ5TCM9 118 aa5.21□□□□□ -1.58
SP1-203ENST00000548560 ZNF706Q9Y5V0 76 aaPredicted RBP5.21□□□□□ -1.58
SP1-203ENST00000548560 CRYGAP11844 174 aa5.2□□□□□ -1.58
SP1-203ENST00000548560 GAGE2AQ6NT46 116 aa5.2□□□□□ -1.58
SP1-203ENST00000548560 TNXBP22105 4242 aa5.19□□□□□ -1.58
SP1-203ENST00000548560 ZNF73O43830 326 aaPredicted RBP5.19□□□□□ -1.58
SP1-203ENST00000548560 JOSD1Q15040 202 aaPredicted RBP5.19□□□□□ -1.58
SP1-203ENST00000548560 FAM229BQ4G0N7 80 aa5.19□□□□□ -1.58
SP1-203ENST00000548560 VAMP8Q9BV40 100 aa5.19□□□□□ -1.58
SP1-203ENST00000548560 PPDPFQ9H3Y8 114 aa5.19□□□□□ -1.58
SP1-203ENST00000548560 KRTAP4-16G5E9R7 235 aaPredicted RBP5.18□□□□□ -1.58
SP1-203ENST00000548560 Q6ZRX8 168 aa5.18□□□□□ -1.58
SP1-203ENST00000548560 MUSTN1Q8IVN3 82 aa5.18□□□□□ -1.58
SP1-203ENST00000548560 TYMSOSQ8TAI1 123 aa5.18□□□□□ -1.58
SP1-203ENST00000548560 A0A087X002 238 aa5.17□□□□□ -1.58
SP1-203ENST00000548560 A4D1N5 150 aa5.17□□□□□ -1.58
SP1-203ENST00000548560 A6NDN8 102 aa5.17□□□□□ -1.58
SP1-203ENST00000548560 COX8AP10176 69 aa5.17□□□□□ -1.58
SP1-203ENST00000548560 SPATA45Q537H7 98 aa5.17□□□□□ -1.58
SP1-203ENST00000548560 SMCR5Q8TEV8 140 aa5.17□□□□□ -1.58
SP1-203ENST00000548560 TRAV13-2A0A0B4J235 113 aa5.16□□□□□ -1.58
SP1-203ENST00000548560 SPRR4Q96PI1 79 aa5.16□□□□□ -1.58
SP1-203ENST00000548560 KRTAP9-3Q9BYQ3 159 aa5.16□□□□□ -1.58
SP1-203ENST00000548560 ANAPC11Q9NYG5 84 aa5.16□□□□□ -1.58
SP1-203ENST00000548560 DLEU1O43261 78 aa5.15□□□□□ -1.59
SP1-203ENST00000548560 HIST1H4GQ99525 98 aa5.15□□□□□ -1.59
SP1-203ENST00000548560 C6orf99Q4VX62 202 aa5.14□□□□□ -1.59
SP1-203ENST00000548560 SLC25A34Q6PIV7 304 aa5.14□□□□□ -1.59
SP1-203ENST00000548560 C14orf144Q96I85 54 aa5.14□□□□□ -1.59
SP1-203ENST00000548560 Q9BRP9 147 aa5.14□□□□□ -1.59
SP1-203ENST00000548560 DHRS4-AS1Q9P1J3 65 aa5.14□□□□□ -1.59
SP1-203ENST00000548560 COX7BP24311 80 aa5.13□□□□□ -1.59
SP1-203ENST00000548560 KRTAP13-2Q52LG2 175 aa5.13□□□□□ -1.59
SP1-203ENST00000548560 A0A1B0GWB2 263 aa5.12□□□□□ -1.59
SP1-203ENST00000548560 ERC2-IT1O76042 136 aa5.12□□□□□ -1.59
SP1-203ENST00000548560 ELOF1P60002 83 aaKnown RBP5.12□□□□□ -1.59
SP1-203ENST00000548560 LINC00304Q8N9R0 145 aa5.12□□□□□ -1.59
SP1-203ENST00000548560 HIGD1BQ9P298 99 aa5.12□□□□□ -1.59
SP1-203ENST00000548560 TRBV7-6A0A0J9YX20 115 aa5.11□□□□□ -1.59
SP1-203ENST00000548560 LINC00483Q53H64 154 aa5.11□□□□□ -1.59
SP1-203ENST00000548560 PYY3Q5JQD4 70 aa5.11□□□□□ -1.59
SP1-203ENST00000548560 C3orf22Q8N5N4 141 aa5.11□□□□□ -1.59
SP1-203ENST00000548560 TSPAN13O95857 204 aa5.1□□□□□ -1.59
SP1-203ENST00000548560 VAMP3Q15836 100 aa5.1□□□□□ -1.59
SP1-203ENST00000548560 SMIM11BQ8TCY0 68 aa5.1□□□□□ -1.59
SP1-203ENST00000548560 C12orf57Q99622 126 aa5.1□□□□□ -1.59
SP1-203ENST00000548560 NHP2Q9NX24 153 aaKnown RBP5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms