RNA–Protein interactions for RNA: ENST00000547194.1

HCFC2-203, Transcript of host cell factor C2, humanhuman

TSL 3

Gene HCFC2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-203ENST00000547194 NCR3O14931 201 aa1.67□□□□□ -2.14
HCFC2-203ENST00000547194 CCL18P55774 89 aa1.67□□□□□ -2.14
HCFC2-203ENST00000547194 KRTAP13-2Q52LG2 175 aa1.67□□□□□ -2.14
HCFC2-203ENST00000547194 Q8IZM0 81 aa1.67□□□□□ -2.14
HCFC2-203ENST00000547194 SPACA4Q8TDM5 124 aa1.67□□□□□ -2.14
HCFC2-203ENST00000547194 LEAP2Q969E1 77 aa1.67□□□□□ -2.14
HCFC2-203ENST00000547194 FAM186AA6NE01 2351 aa1.67□□□□□ -2.14
HCFC2-203ENST00000547194 GPR179Q6PRD1 2367 aa1.67□□□□□ -2.14
HCFC2-203ENST00000547194 SDK1Q7Z5N4 2213 aa1.67□□□□□ -2.14
HCFC2-203ENST00000547194 MED13LQ71F56 2210 aa1.66□□□□□ -2.14
HCFC2-203ENST00000547194 SORL1Q92673 2214 aa1.66□□□□□ -2.14
HCFC2-203ENST00000547194 TRGV2A0A075B6R0 118 aa1.66□□□□□ -2.14
HCFC2-203ENST00000547194 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.66□□□□□ -2.14
HCFC2-203ENST00000547194 ETDCA0A1B0GVM5 59 aa1.66□□□□□ -2.14
HCFC2-203ENST00000547194 MGPP08493 103 aa1.66□□□□□ -2.14
HCFC2-203ENST00000547194 RPL37AP61513 92 aaKnown RBP1.66□□□□□ -2.14
HCFC2-203ENST00000547194 USMG5Q96IX5 58 aa1.66□□□□□ -2.14
HCFC2-203ENST00000547194 SPRR4Q96PI1 79 aa1.66□□□□□ -2.14
HCFC2-203ENST00000547194 U3KQA8 63 aa1.66□□□□□ -2.14
HCFC2-203ENST00000547194 CCL3L1P16619 93 aa1.65□□□□□ -2.15
HCFC2-203ENST00000547194 DEFB103AP81534 67 aa1.65□□□□□ -2.15
HCFC2-203ENST00000547194 COX6A2Q02221 97 aa1.65□□□□□ -2.15
HCFC2-203ENST00000547194 LINC00304Q8N9R0 145 aa1.65□□□□□ -2.15
HCFC2-203ENST00000547194 GVQW2A0A096LPI5 108 aaPredicted RBP1.64□□□□□ -2.15
HCFC2-203ENST00000547194 HAMPP81172 84 aa1.64□□□□□ -2.15
HCFC2-203ENST00000547194 DEFB133Q30KQ1 61 aa1.64□□□□□ -2.15
HCFC2-203ENST00000547194 LINC00208Q96KT6 92 aa1.64□□□□□ -2.15
HCFC2-203ENST00000547194 SPTBN1Q01082 2364 aaKnown RBP1.63□□□□□ -2.15
HCFC2-203ENST00000547194 INE1O15225 51 aa1.63□□□□□ -2.15
HCFC2-203ENST00000547194 WFDC9Q8NEX5 89 aa1.63□□□□□ -2.15
HCFC2-203ENST00000547194 DEFB131BA0A096LNP1 70 aa1.62□□□□□ -2.15
HCFC2-203ENST00000547194 M0R2N4 97 aa1.62□□□□□ -2.15
HCFC2-203ENST00000547194 SPATA8Q6RVD6 105 aa1.62□□□□□ -2.15
HCFC2-203ENST00000547194 KMT2BQ9UMN6 2715 aaPredicted RBP1.61□□□□□ -2.15
HCFC2-203ENST00000547194 UQCR11O14957 56 aa1.61□□□□□ -2.15
HCFC2-203ENST00000547194 LINC00158P58513 81 aa1.61□□□□□ -2.15
HCFC2-203ENST00000547194 IGKV3OR2-268A0A0C4DH90 116 aa1.6□□□□□ -2.15
HCFC2-203ENST00000547194 Q6ZQY7 126 aa1.6□□□□□ -2.15
HCFC2-203ENST00000547194 C5orf56Q8N8D9 126 aa1.6□□□□□ -2.15
HCFC2-203ENST00000547194 DEFB108BQ8NET1 73 aa1.6□□□□□ -2.15
HCFC2-203ENST00000547194 PRR15LQ9BU68 103 aa1.6□□□□□ -2.15
HCFC2-203ENST00000547194 RHPN1-AS1Q9BWJ2 59 aa1.6□□□□□ -2.15
HCFC2-203ENST00000547194 TP53AIP1Q9HCN2 124 aa1.6□□□□□ -2.15
HCFC2-203ENST00000547194 WDR87Q6ZQQ6 2873 aa1.6□□□□□ -2.15
HCFC2-203ENST00000547194 APC2O95996 2303 aa1.6□□□□□ -2.15
HCFC2-203ENST00000547194 PCNX1Q96RV3 2341 aa1.6□□□□□ -2.15
HCFC2-203ENST00000547194 SPTBN2O15020 2390 aa1.59□□□□□ -2.15
HCFC2-203ENST00000547194 LINC00959A0A1B0GUT2 108 aa1.59□□□□□ -2.15
HCFC2-203ENST00000547194 LYNX1G3V0Z9 82 aa1.59□□□□□ -2.15
HCFC2-203ENST00000547194 DEFB132Q7Z7B7 95 aa1.59□□□□□ -2.15
HCFC2-203ENST00000547194 CENPFP49454 3210 aa1.59□□□□□ -2.16
HCFC2-203ENST00000547194 SRCAPQ6ZRS2 3230 aa1.59□□□□□ -2.16
HCFC2-203ENST00000547194 CEP350Q5VT06 3117 aa1.59□□□□□ -2.16
HCFC2-203ENST00000547194 PKDREJQ9NTG1 2253 aa1.59□□□□□ -2.16
HCFC2-203ENST00000547194 ZFHX3Q15911 3703 aa1.58□□□□□ -2.16
HCFC2-203ENST00000547194 GOLGB1Q14789 3259 aaKnown RBP1.58□□□□□ -2.16
HCFC2-203ENST00000547194 HMCN1Q96RW7 5635 aa1.58□□□□□ -2.16
HCFC2-203ENST00000547194 NBDYA0A0U1RRE5 68 aa1.58□□□□□ -2.16
HCFC2-203ENST00000547194 APELAP0DMC3 54 aa1.58□□□□□ -2.16
HCFC2-203ENST00000547194 SPRR1AP35321 89 aa1.58□□□□□ -2.16
HCFC2-203ENST00000547194 H0Y9P7 68 aa1.57□□□□□ -2.16
HCFC2-203ENST00000547194 H3BUX3 64 aa1.57□□□□□ -2.16
HCFC2-203ENST00000547194 ACYP2P14621 99 aa1.57□□□□□ -2.16
HCFC2-203ENST00000547194 CRCT1Q9UGL9 99 aa1.57□□□□□ -2.16
HCFC2-203ENST00000547194 COL6A6A6NMZ7 2263 aa1.57□□□□□ -2.16
HCFC2-203ENST00000547194 FN1P02751 2386 aaKnown RBP1.57□□□□□ -2.16
HCFC2-203ENST00000547194 EP300Q09472 2414 aaPredicted RBP1.57□□□□□ -2.16
HCFC2-203ENST00000547194 DNAH12Q6ZR08 3092 aa1.56□□□□□ -2.16
HCFC2-203ENST00000547194 CNOT1A5YKK6 2376 aaKnown RBP1.56□□□□□ -2.16
HCFC2-203ENST00000547194 TPRP12270 2363 aaKnown RBP1.56□□□□□ -2.16
HCFC2-203ENST00000547194 DEFB112Q30KQ8 113 aa1.56□□□□□ -2.16
HCFC2-203ENST00000547194 Q6ZRN7 208 aaPredicted RBP1.56□□□□□ -2.16
HCFC2-203ENST00000547194 WNK1Q9H4A3 2382 aa1.56□□□□□ -2.16
HCFC2-203ENST00000547194 ROS1P08922 2347 aa1.55□□□□□ -2.16
HCFC2-203ENST00000547194 CEP250Q9BV73 2442 aa1.55□□□□□ -2.16
HCFC2-203ENST00000547194 TRGV1A0A0A0MS02 117 aa1.55□□□□□ -2.16
HCFC2-203ENST00000547194 K7EQZ3 153 aa1.55□□□□□ -2.16
HCFC2-203ENST00000547194 SPINK7P58062 85 aa1.55□□□□□ -2.16
HCFC2-203ENST00000547194 DEFB131AP59861 70 aa1.55□□□□□ -2.16
HCFC2-203ENST00000547194 SPINK13Q1W4C9 94 aa1.55□□□□□ -2.16
HCFC2-203ENST00000547194 DEFB119Q8N690 84 aa1.55□□□□□ -2.16
HCFC2-203ENST00000547194 FDCSPQ8NFU4 85 aa1.55□□□□□ -2.16
HCFC2-203ENST00000547194 CCL19Q99731 98 aa1.55□□□□□ -2.16
HCFC2-203ENST00000547194 KRTAP4-1Q9BYQ7 146 aa1.55□□□□□ -2.16
HCFC2-203ENST00000547194 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.55□□□□□ -2.16
HCFC2-203ENST00000547194 COL6A3P12111 3177 aa1.55□□□□□ -2.16
HCFC2-203ENST00000547194 EP400Q96L91 3159 aa1.54□□□□□ -2.16
HCFC2-203ENST00000547194 G3V318 75 aa1.54□□□□□ -2.16
HCFC2-203ENST00000547194 SPRR1BP22528 89 aa1.54□□□□□ -2.16
HCFC2-203ENST00000547194 BRD3OSQ6XYD6 125 aa1.54□□□□□ -2.16
HCFC2-203ENST00000547194 TOMM7Q9P0U1 55 aa1.54□□□□□ -2.16
HCFC2-203ENST00000547194 TNRC18O15417 2968 aaPredicted RBP1.54□□□□□ -2.16
HCFC2-203ENST00000547194 PTPRZ1P23471 2315 aaPredicted RBP1.54□□□□□ -2.16
HCFC2-203ENST00000547194 MAP1BP46821 2468 aaKnown RBP1.54□□□□□ -2.16
HCFC2-203ENST00000547194 A0A087WTM6 91 aa1.53□□□□□ -2.16
HCFC2-203ENST00000547194 RANBP2P49792 3224 aaKnown RBP1.53□□□□□ -2.16
HCFC2-203ENST00000547194 DEFB1P60022 68 aa1.53□□□□□ -2.16
HCFC2-203ENST00000547194 ACACAQ13085 2346 aa1.53□□□□□ -2.16
HCFC2-203ENST00000547194 DEFB109BQ30KR1 87 aa1.53□□□□□ -2.16
HCFC2-203ENST00000547194 Q6ZRX8 168 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms