RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 HAMPP81172 84 aa9.85□□□□□ -0.83
TRAFD1-203ENST00000547063 ETDCA0A1B0GVM5 59 aa9.84□□□□□ -0.83
TRAFD1-203ENST00000547063 SPRR1AP35321 89 aa9.84□□□□□ -0.83
TRAFD1-203ENST00000547063 C6orf99Q4VX62 202 aa9.84□□□□□ -0.83
TRAFD1-203ENST00000547063 TAX1BP3O14907 124 aa9.83□□□□□ -0.84
TRAFD1-203ENST00000547063 LYRM7Q5U5X0 104 aa9.83□□□□□ -0.84
TRAFD1-203ENST00000547063 C9orf118A6NHY6 69 aa9.82□□□□□ -0.84
TRAFD1-203ENST00000547063 H0YGX0 51 aa9.82□□□□□ -0.84
TRAFD1-203ENST00000547063 PSORS1C2Q9UIG4 136 aa9.82□□□□□ -0.84
TRAFD1-203ENST00000547063 TRIAP1O43715 76 aa9.81□□□□□ -0.84
TRAFD1-203ENST00000547063 BCE1O60756 84 aa9.81□□□□□ -0.84
TRAFD1-203ENST00000547063 COX7BP24311 80 aa9.81□□□□□ -0.84
TRAFD1-203ENST00000547063 KRTAP11-1Q8IUC1 163 aa9.81□□□□□ -0.84
TRAFD1-203ENST00000547063 KRTAP4-16G5E9R7 235 aaPredicted RBP9.8□□□□□ -0.84
TRAFD1-203ENST00000547063 SNCGO76070 127 aa9.8□□□□□ -0.84
TRAFD1-203ENST00000547063 SCGB1C2P0DMR2 95 aa9.8□□□□□ -0.84
TRAFD1-203ENST00000547063 FAM19A1Q7Z5A9 133 aa9.8□□□□□ -0.84
TRAFD1-203ENST00000547063 H0Y9J4 135 aa9.79□□□□□ -0.84
TRAFD1-203ENST00000547063 H3BUT2 72 aa9.79□□□□□ -0.84
TRAFD1-203ENST00000547063 ELOF1P60002 83 aaKnown RBP9.79□□□□□ -0.84
TRAFD1-203ENST00000547063 C1orf137Q5JT78 98 aa9.79□□□□□ -0.84
TRAFD1-203ENST00000547063 LINC00528Q8N1L1 170 aa9.79□□□□□ -0.84
TRAFD1-203ENST00000547063 DNAH5Q8TE73 4624 aa9.79□□□□□ -0.84
TRAFD1-203ENST00000547063 B5MCH6 92 aa9.78□□□□□ -0.84
TRAFD1-203ENST00000547063 UBE2AP49459 152 aa9.78□□□□□ -0.84
TRAFD1-203ENST00000547063 Q6ZRX8 168 aa9.78□□□□□ -0.84
TRAFD1-203ENST00000547063 SLC25A20O43772 301 aa9.77□□□□□ -0.85
TRAFD1-203ENST00000547063 INAFM2P0DMQ5 153 aa9.77□□□□□ -0.85
TRAFD1-203ENST00000547063 DHRS4-AS1Q9P1J3 65 aa9.77□□□□□ -0.85
TRAFD1-203ENST00000547063 RPL37AP61513 92 aaKnown RBP9.76□□□□□ -0.85
TRAFD1-203ENST00000547063 NAA38Q9BRA0 125 aaKnown RBP9.76□□□□□ -0.85
TRAFD1-203ENST00000547063 PKHD1P08F94 4074 aa9.76□□□□□ -0.85
TRAFD1-203ENST00000547063 A0A1W2PPM0 123 aa9.75□□□□□ -0.85
TRAFD1-203ENST00000547063 SMR3BP02814 79 aaPredicted RBP9.75□□□□□ -0.85
TRAFD1-203ENST00000547063 FABP2P12104 132 aa9.75□□□□□ -0.85
TRAFD1-203ENST00000547063 A0A1B0GX51 115 aa9.74□□□□□ -0.85
TRAFD1-203ENST00000547063 FAM229AH3BQW9 127 aa9.74□□□□□ -0.85
TRAFD1-203ENST00000547063 IGLV7-43P04211 117 aa9.74□□□□□ -0.85
TRAFD1-203ENST00000547063 TRBV20-1A0A075B6N2 111 aa9.73□□□□□ -0.85
TRAFD1-203ENST00000547063 PLA2G1BP04054 148 aaKnown RBP9.73□□□□□ -0.85
TRAFD1-203ENST00000547063 PRLHP81277 87 aa9.73□□□□□ -0.85
TRAFD1-203ENST00000547063 LINC00575Q6W349 94 aa9.73□□□□□ -0.85
TRAFD1-203ENST00000547063 ZNF861PO60384 105 aa9.72□□□□□ -0.85
TRAFD1-203ENST00000547063 hADV29S1A0JD25 119 aa9.71□□□□□ -0.86
TRAFD1-203ENST00000547063 KRTAP13-1Q8IUC0 172 aa9.71□□□□□ -0.86
TRAFD1-203ENST00000547063 ATXN8Q156A1 80 aa9.7□□□□□ -0.86
TRAFD1-203ENST00000547063 CLEC2BQ92478 149 aa9.7□□□□□ -0.86
TRAFD1-203ENST00000547063 HIGD2AQ9BW72 106 aa9.7□□□□□ -0.86
TRAFD1-203ENST00000547063 Q9BRP9 147 aa9.69□□□□□ -0.86
TRAFD1-203ENST00000547063 DYNC1H1Q14204 4646 aaKnown RBP9.69□□□□□ -0.86
TRAFD1-203ENST00000547063 LRP1BQ9NZR2 4599 aa9.68□□□□□ -0.86
TRAFD1-203ENST00000547063 LST1O00453 97 aa9.68□□□□□ -0.86
TRAFD1-203ENST00000547063 DNAL4O96015 105 aa9.68□□□□□ -0.86
TRAFD1-203ENST00000547063 GHRHP01286 108 aa9.68□□□□□ -0.86
TRAFD1-203ENST00000547063 TRACP01848 142 aa9.68□□□□□ -0.86
TRAFD1-203ENST00000547063 SMCR5Q8TEV8 140 aa9.68□□□□□ -0.86
TRAFD1-203ENST00000547063 TCL1BO95988 128 aa9.67□□□□□ -0.86
TRAFD1-203ENST00000547063 FAM218AQ96MZ4 157 aa9.67□□□□□ -0.86
TRAFD1-203ENST00000547063 SPCS1Q9Y6A9 102 aa9.67□□□□□ -0.86
TRAFD1-203ENST00000547063 DNAH8Q96JB1 4490 aa9.67□□□□□ -0.86
TRAFD1-203ENST00000547063 LCE2BO14633 110 aa9.66□□□□□ -0.86
TRAFD1-203ENST00000547063 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.66□□□□□ -0.86
TRAFD1-203ENST00000547063 OCIAD2Q56VL3 154 aa9.65□□□□□ -0.86
TRAFD1-203ENST00000547063 GTF2H5Q6ZYL4 71 aa9.65□□□□□ -0.86
TRAFD1-203ENST00000547063 Q8N1X5 172 aa9.65□□□□□ -0.86
TRAFD1-203ENST00000547063 ZNF706Q9Y5V0 76 aaPredicted RBP9.65□□□□□ -0.86
TRAFD1-203ENST00000547063 H3BQ85 93 aa9.64□□□□□ -0.87
TRAFD1-203ENST00000547063 Q5VSD8 79 aa9.64□□□□□ -0.87
TRAFD1-203ENST00000547063 SPINK6Q6UWN8 80 aa9.64□□□□□ -0.87
TRAFD1-203ENST00000547063 K7EP34 96 aa9.62□□□□□ -0.87
TRAFD1-203ENST00000547063 ERC2-IT1O76042 136 aa9.62□□□□□ -0.87
TRAFD1-203ENST00000547063 Q6ZQY7 126 aa9.62□□□□□ -0.87
TRAFD1-203ENST00000547063 KRTAP10-4P60372 401 aaPredicted RBP9.61□□□□□ -0.87
TRAFD1-203ENST00000547063 ORMDL1Q9P0S3 153 aa9.61□□□□□ -0.87
TRAFD1-203ENST00000547063 PPDPFLQ8WWR9 84 aa9.6□□□□□ -0.87
TRAFD1-203ENST00000547063 H3BMG7 143 aa9.59□□□□□ -0.87
TRAFD1-203ENST00000547063 EPPK1P58107 5090 aaKnown RBP9.57□□□□□ -0.88
TRAFD1-203ENST00000547063 IGLV5-48A0A075B6I7 105 aa9.57□□□□□ -0.88
TRAFD1-203ENST00000547063 TEX49A0A1B0GTD5 131 aa9.57□□□□□ -0.88
TRAFD1-203ENST00000547063 SPRR4Q96PI1 79 aa9.57□□□□□ -0.88
TRAFD1-203ENST00000547063 C9JAW5 83 aa9.56□□□□□ -0.88
TRAFD1-203ENST00000547063 TMEM256-PLSCR3K7ERE1 68 aa9.56□□□□□ -0.88
TRAFD1-203ENST00000547063 ST20-AS1Q8NBB2 130 aa9.56□□□□□ -0.88
TRAFD1-203ENST00000547063 DEFB105AQ8NG35 78 aa9.56□□□□□ -0.88
TRAFD1-203ENST00000547063 APOBP04114 4563 aaKnown RBP9.55□□□□□ -0.88
TRAFD1-203ENST00000547063 A0A1B0GV90 55 aa9.55□□□□□ -0.88
TRAFD1-203ENST00000547063 SPRR1BP22528 89 aa9.55□□□□□ -0.88
TRAFD1-203ENST00000547063 GAGE2AQ6NT46 116 aa9.55□□□□□ -0.88
TRAFD1-203ENST00000547063 BAALC-AS2P0C853 105 aa9.54□□□□□ -0.88
TRAFD1-203ENST00000547063 H3BT86 120 aa9.53□□□□□ -0.88
TRAFD1-203ENST00000547063 LINC00483Q53H64 154 aa9.53□□□□□ -0.88
TRAFD1-203ENST00000547063 LINC01547P58512 204 aaPredicted RBP9.52□□□□□ -0.89
TRAFD1-203ENST00000547063 Q8N377 158 aa9.52□□□□□ -0.89
TRAFD1-203ENST00000547063 LAMTOR3Q9UHA4 124 aa9.51□□□□□ -0.89
TRAFD1-203ENST00000547063 UBE2V1Q13404 147 aa9.5□□□□□ -0.89
TRAFD1-203ENST00000547063 FAM229BQ4G0N7 80 aa9.5□□□□□ -0.89
TRAFD1-203ENST00000547063 F8W1H4 67 aa9.49□□□□□ -0.89
TRAFD1-203ENST00000547063 ANKRD29Q8N6D5 301 aa9.49□□□□□ -0.89
TRAFD1-203ENST00000547063 F8WEM9 126 aa9.48□□□□□ -0.89
TRAFD1-203ENST00000547063 NDUFV3P56181 108 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms