RNA–Protein interactions for RNA: ENST00000545848.5

LDHC-209, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-209ENST00000545848 CKS1BP61024 79 aa3.7□□□□□ -1.82
LDHC-209ENST00000545848 PRLHP81277 87 aa3.7□□□□□ -1.82
LDHC-209ENST00000545848 C4orf26Q17RF5 130 aa3.7□□□□□ -1.82
LDHC-209ENST00000545848 DAND5Q8N907 189 aa3.7□□□□□ -1.82
LDHC-209ENST00000545848 IFI27L1Q96BM0 104 aa3.7□□□□□ -1.82
LDHC-209ENST00000545848 IGKV2-28A0A075B6P5 120 aa3.69□□□□□ -1.82
LDHC-209ENST00000545848 HIST1H2BKO60814 126 aa3.69□□□□□ -1.82
LDHC-209ENST00000545848 IGKV2D-28P01615 120 aa3.69□□□□□ -1.82
LDHC-209ENST00000545848 HIST1H2BJP06899 126 aa3.69□□□□□ -1.82
LDHC-209ENST00000545848 HIST1H2BOP23527 126 aa3.69□□□□□ -1.82
LDHC-209ENST00000545848 HIST1H2BBP33778 126 aa3.69□□□□□ -1.82
LDHC-209ENST00000545848 AKR1D1P51857 326 aa3.69□□□□□ -1.82
LDHC-209ENST00000545848 HIST1H2BDP58876 126 aa3.69□□□□□ -1.82
LDHC-209ENST00000545848 HIST1H2BCP62807 126 aa3.69□□□□□ -1.82
LDHC-209ENST00000545848 UBE2BP63146 152 aa3.69□□□□□ -1.82
LDHC-209ENST00000545848 HIST2H2BEQ16778 126 aa3.69□□□□□ -1.82
LDHC-209ENST00000545848 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.69□□□□□ -1.82
LDHC-209ENST00000545848 TMEM170BQ5T4T1 132 aa3.69□□□□□ -1.82
LDHC-209ENST00000545848 SOSTDC1Q6X4U4 206 aa3.69□□□□□ -1.82
LDHC-209ENST00000545848 MRPL55Q7Z7F7 128 aaKnown RBP3.69□□□□□ -1.82
LDHC-209ENST00000545848 HIST1H2BHQ93079 126 aa3.69□□□□□ -1.82
LDHC-209ENST00000545848 HIST1H2BNQ99877 126 aa3.69□□□□□ -1.82
LDHC-209ENST00000545848 HIST1H2BMQ99879 126 aa3.69□□□□□ -1.82
LDHC-209ENST00000545848 TTTY13Q9BZ97 58 aa3.69□□□□□ -1.82
LDHC-209ENST00000545848 TP73-AS1Q9UF72 201 aa3.69□□□□□ -1.82
LDHC-209ENST00000545848 ERG28Q9UKR5 140 aa3.69□□□□□ -1.82
LDHC-209ENST00000545848 K7ERU9 68 aa3.68□□□□□ -1.82
LDHC-209ENST00000545848 M0R378 163 aa3.68□□□□□ -1.82
LDHC-209ENST00000545848 SMIM13P0DJ93 91 aa3.68□□□□□ -1.82
LDHC-209ENST00000545848 FABP4P15090 132 aa3.68□□□□□ -1.82
LDHC-209ENST00000545848 C1orf195Q5TG92 126 aa3.68□□□□□ -1.82
LDHC-209ENST00000545848 CHCHD1Q96BP2 118 aaKnown RBP3.68□□□□□ -1.82
LDHC-209ENST00000545848 IGKV2D-26A0A0A0MRZ7 120 aa3.67□□□□□ -1.82
LDHC-209ENST00000545848 TRAV12-1A0A0B4J245 112 aa3.67□□□□□ -1.82
LDHC-209ENST00000545848 NCR3O14931 201 aa3.67□□□□□ -1.82
LDHC-209ENST00000545848 CXCL5P42830 114 aa3.67□□□□□ -1.82
LDHC-209ENST00000545848 SEC11AP67812 179 aa3.67□□□□□ -1.82
LDHC-209ENST00000545848 SS18L2Q9UHA2 77 aa3.67□□□□□ -1.82
LDHC-209ENST00000545848 MUC2Q02817 5179 aa3.67□□□□□ -1.82
LDHC-209ENST00000545848 IGLV1-50A0A075B6I6 118 aa3.66□□□□□ -1.82
LDHC-209ENST00000545848 ZNF861PO60384 105 aa3.66□□□□□ -1.82
LDHC-209ENST00000545848 PAPPA-AS1Q5QFB9 102 aa3.66□□□□□ -1.82
LDHC-209ENST00000545848 ADAMTSL4-AS1Q5T5F5 129 aa3.66□□□□□ -1.82
LDHC-209ENST00000545848 C3orf22Q8N5N4 141 aa3.66□□□□□ -1.82
LDHC-209ENST00000545848 A6NDN8 102 aa3.65□□□□□ -1.83
LDHC-209ENST00000545848 KRTAP4-16G5E9R7 235 aaPredicted RBP3.65□□□□□ -1.83
LDHC-209ENST00000545848 BCE1O60756 84 aa3.65□□□□□ -1.83
LDHC-209ENST00000545848 ERC2-IT1O76042 136 aa3.65□□□□□ -1.83
LDHC-209ENST00000545848 KRTAP10-5P60370 271 aa3.65□□□□□ -1.83
LDHC-209ENST00000545848 NPC2P61916 151 aa3.65□□□□□ -1.83
LDHC-209ENST00000545848 Q6ZVQ6 151 aa3.65□□□□□ -1.83
LDHC-209ENST00000545848 MIR7-3HGQ8N6C7 128 aa3.65□□□□□ -1.83
LDHC-209ENST00000545848 PLEKHB2Q96CS7 222 aa3.65□□□□□ -1.83
LDHC-209ENST00000545848 LITAFQ99732 161 aa3.65□□□□□ -1.83
LDHC-209ENST00000545848 KRTAP4-4Q9BYR3 166 aa3.65□□□□□ -1.83
LDHC-209ENST00000545848 TMEM126AQ9H061 195 aa3.65□□□□□ -1.83
LDHC-209ENST00000545848 FAM240AA0A1B0GVK7 77 aa3.64□□□□□ -1.83
LDHC-209ENST00000545848 H3BRM9 83 aa3.64□□□□□ -1.83
LDHC-209ENST00000545848 LEPROTL1O95214 131 aa3.64□□□□□ -1.83
LDHC-209ENST00000545848 REG3GQ6UW15 175 aa3.64□□□□□ -1.83
LDHC-209ENST00000545848 DIRC1Q969H9 104 aa3.64□□□□□ -1.83
LDHC-209ENST00000545848 RETNLBQ9BQ08 111 aa3.64□□□□□ -1.83
LDHC-209ENST00000545848 PPDPFQ9H3Y8 114 aa3.64□□□□□ -1.83
LDHC-209ENST00000545848 PKIGQ9Y2B9 76 aa3.64□□□□□ -1.83
LDHC-209ENST00000545848 LINC00158P58513 81 aa3.63□□□□□ -1.83
LDHC-209ENST00000545848 NDUFA12Q9UI09 145 aa3.63□□□□□ -1.83
LDHC-209ENST00000545848 TRBV10-3A0A0K0K1G6 114 aa3.62□□□□□ -1.83
LDHC-209ENST00000545848 A0A0U1RQV1 116 aa3.62□□□□□ -1.83
LDHC-209ENST00000545848 LINC01549A6NIU2 74 aa3.62□□□□□ -1.83
LDHC-209ENST00000545848 LEPROTO15243 131 aa3.62□□□□□ -1.83
LDHC-209ENST00000545848 C3orf79P0CE67 100 aa3.62□□□□□ -1.83
LDHC-209ENST00000545848 SPRR1AP35321 89 aa3.62□□□□□ -1.83
LDHC-209ENST00000545848 SMCR5Q8TEV8 140 aa3.62□□□□□ -1.83
LDHC-209ENST00000545848 Q9BRP9 147 aa3.62□□□□□ -1.83
LDHC-209ENST00000545848 HSPB8Q9UJY1 196 aa3.62□□□□□ -1.83
LDHC-209ENST00000545848 A0A0J9YXY3 114 aa3.61□□□□□ -1.83
LDHC-209ENST00000545848 C20orf202A1L168 122 aa3.61□□□□□ -1.83
LDHC-209ENST00000545848 SYS1-DBNDD2H3BUS1 97 aa3.61□□□□□ -1.83
LDHC-209ENST00000545848 J3QQQ9 107 aa3.61□□□□□ -1.83
LDHC-209ENST00000545848 IGKCP01834 107 aa3.61□□□□□ -1.83
LDHC-209ENST00000545848 DDTP30046 118 aa3.61□□□□□ -1.83
LDHC-209ENST00000545848 RPS28P62857 69 aaKnown RBP3.61□□□□□ -1.83
LDHC-209ENST00000545848 LINC01545Q5VT33 79 aa3.61□□□□□ -1.83
LDHC-209ENST00000545848 ATOH7Q8N100 152 aa3.61□□□□□ -1.83
LDHC-209ENST00000545848 NKAPP1Q8N9T2 125 aa3.61□□□□□ -1.83
LDHC-209ENST00000545848 DPM2O94777 84 aa3.6□□□□□ -1.83
LDHC-209ENST00000545848 COA6Q5JTJ3 125 aaKnown RBP3.6□□□□□ -1.83
LDHC-209ENST00000545848 FAT4Q6V0I7 4981 aa3.6□□□□□ -1.83
LDHC-209ENST00000545848 A0A1B0GX51 115 aa3.59□□□□□ -1.83
LDHC-209ENST00000545848 E9PLD3 99 aa3.59□□□□□ -1.83
LDHC-209ENST00000545848 UBE2AP49459 152 aa3.59□□□□□ -1.83
LDHC-209ENST00000545848 COX17Q14061 63 aa3.59□□□□□ -1.83
LDHC-209ENST00000545848 BATFQ16520 125 aa3.59□□□□□ -1.83
LDHC-209ENST00000545848 OCIAD2Q56VL3 154 aa3.59□□□□□ -1.83
LDHC-209ENST00000545848 MEIG1Q5JSS6 88 aa3.59□□□□□ -1.83
LDHC-209ENST00000545848 SPRR4Q96PI1 79 aa3.59□□□□□ -1.83
LDHC-209ENST00000545848 LOC107984156A0A0G2JMH3 177 aa3.58□□□□□ -1.84
LDHC-209ENST00000545848 J3KT08 172 aa3.58□□□□□ -1.84
LDHC-209ENST00000545848 M0R143 59 aa3.58□□□□□ -1.84
LDHC-209ENST00000545848 RPL28P46779 137 aaKnown RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms