RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 ATOH7Q8N100 152 aa9.26□□□□□ -0.93
CCDC78-216ENST00000544996 LITAFQ99732 161 aa9.26□□□□□ -0.93
CCDC78-216ENST00000544996 TTTY13Q9BZ97 58 aa9.26□□□□□ -0.93
CCDC78-216ENST00000544996 EIF4EBP3O60516 100 aaPredicted RBP9.25□□□□□ -0.93
CCDC78-216ENST00000544996 IGLV6-57P01721 117 aa9.25□□□□□ -0.93
CCDC78-216ENST00000544996 KRTAP13-2Q52LG2 175 aa9.25□□□□□ -0.93
CCDC78-216ENST00000544996 SCGB1D4Q6XE38 83 aa9.25□□□□□ -0.93
CCDC78-216ENST00000544996 LINC00308Q8TCZ7 52 aa9.25□□□□□ -0.93
CCDC78-216ENST00000544996 SPANXCQ9NY87 97 aa9.25□□□□□ -0.93
CCDC78-216ENST00000544996 CBY1Q9Y3M2 126 aa9.25□□□□□ -0.93
CCDC78-216ENST00000544996 TSPAN13O95857 204 aa9.24□□□□□ -0.93
CCDC78-216ENST00000544996 SMCR5Q8TEV8 140 aa9.24□□□□□ -0.93
CCDC78-216ENST00000544996 SPRR4Q96PI1 79 aa9.24□□□□□ -0.93
CCDC78-216ENST00000544996 B5MCH6 92 aa9.23□□□□□ -0.93
CCDC78-216ENST00000544996 ANKRD39Q53RE8 183 aa9.23□□□□□ -0.93
CCDC78-216ENST00000544996 HIST1H2BLQ99880 126 aa9.23□□□□□ -0.93
CCDC78-216ENST00000544996 TRAV23DV6A0A075B6W5 121 aa9.22□□□□□ -0.93
CCDC78-216ENST00000544996 Q6ZRX8 168 aa9.21□□□□□ -0.94
CCDC78-216ENST00000544996 LINC00304Q8N9R0 145 aa9.21□□□□□ -0.94
CCDC78-216ENST00000544996 OR13C6PQ8NH95 151 aa9.21□□□□□ -0.94
CCDC78-216ENST00000544996 COPS9Q8WXC6 57 aa9.21□□□□□ -0.94
CCDC78-216ENST00000544996 ZNF73O43830 326 aaPredicted RBP9.2□□□□□ -0.94
CCDC78-216ENST00000544996 HINT1P49773 126 aaPredicted RBP9.2□□□□□ -0.94
CCDC78-216ENST00000544996 PRR4Q16378 134 aa9.19□□□□□ -0.94
CCDC78-216ENST00000544996 SPANXDQ9BXN6 97 aa9.19□□□□□ -0.94
CCDC78-216ENST00000544996 A0A1B0GV90 55 aa9.18□□□□□ -0.94
CCDC78-216ENST00000544996 HSBP1L1C9JCN9 74 aa9.18□□□□□ -0.94
CCDC78-216ENST00000544996 PCP2Q8IVA1 136 aa9.18□□□□□ -0.94
CCDC78-216ENST00000544996 Q6ZVH6 145 aa9.17□□□□□ -0.94
CCDC78-216ENST00000544996 C3orf22Q8N5N4 141 aa9.17□□□□□ -0.94
CCDC78-216ENST00000544996 Q9BRP9 147 aa9.17□□□□□ -0.94
CCDC78-216ENST00000544996 PPDPFQ9H3Y8 114 aa9.17□□□□□ -0.94
CCDC78-216ENST00000544996 IFITM1P13164 125 aa9.16□□□□□ -0.94
CCDC78-216ENST00000544996 GAGE2AQ6NT46 116 aa9.16□□□□□ -0.94
CCDC78-216ENST00000544996 UBR4Q5T4S7 5183 aa9.15□□□□□ -0.94
CCDC78-216ENST00000544996 ERC2-IT1O76042 136 aa9.15□□□□□ -0.94
CCDC78-216ENST00000544996 LINC00483Q53H64 154 aa9.14□□□□□ -0.95
CCDC78-216ENST00000544996 SPAG11AQ6PDA7 123 aa9.14□□□□□ -0.95
CCDC78-216ENST00000544996 C4orf48Q5BLP8 95 aa9.13□□□□□ -0.95
CCDC78-216ENST00000544996 LRP2P98164 4655 aa9.12□□□□□ -0.95
CCDC78-216ENST00000544996 SCGB1D1O95968 90 aa9.11□□□□□ -0.95
CCDC78-216ENST00000544996 MUSTN1Q8IVN3 82 aa9.11□□□□□ -0.95
CCDC78-216ENST00000544996 A6NDN8 102 aa9.1□□□□□ -0.95
CCDC78-216ENST00000544996 M0R143 59 aa9.1□□□□□ -0.95
CCDC78-216ENST00000544996 PRO1933Q9H354 126 aa9.1□□□□□ -0.95
CCDC78-216ENST00000544996 DHRS4-AS1Q9P1J3 65 aa9.1□□□□□ -0.95
CCDC78-216ENST00000544996 Q8NBF4 154 aa9.09□□□□□ -0.95
CCDC78-216ENST00000544996 IGLV9-49A0A0B4J1Y8 123 aa9.08□□□□□ -0.96
CCDC78-216ENST00000544996 COX7BP24311 80 aa9.08□□□□□ -0.96
CCDC78-216ENST00000544996 C6orf99Q4VX62 202 aa9.08□□□□□ -0.96
CCDC78-216ENST00000544996 RETNLBQ9BQ08 111 aa9.07□□□□□ -0.96
CCDC78-216ENST00000544996 TRAV13-2A0A0B4J235 113 aa9.06□□□□□ -0.96
CCDC78-216ENST00000544996 ELOF1P60002 83 aaKnown RBP9.06□□□□□ -0.96
CCDC78-216ENST00000544996 MOBPQ13875 183 aa9.06□□□□□ -0.96
CCDC78-216ENST00000544996 SSBP3-AS1Q7Z2R9 100 aa9.06□□□□□ -0.96
CCDC78-216ENST00000544996 ST20-AS1Q8NBB2 130 aa9.06□□□□□ -0.96
CCDC78-216ENST00000544996 SNHG12Q9BXW3 62 aa9.06□□□□□ -0.96
CCDC78-216ENST00000544996 TRBV7-6A0A0J9YX20 115 aa9.05□□□□□ -0.96
CCDC78-216ENST00000544996 SPINK1P00995 79 aa9.04□□□□□ -0.96
CCDC78-216ENST00000544996 DLEU1O43261 78 aa9.03□□□□□ -0.96
CCDC78-216ENST00000544996 SLC25A34Q6PIV7 304 aa9.03□□□□□ -0.96
CCDC78-216ENST00000544996 LPAP08519 4548 aa9.03□□□□□ -0.96
CCDC78-216ENST00000544996 A0A1B0GWB2 263 aa9.02□□□□□ -0.97
CCDC78-216ENST00000544996 C9orf153Q5TBE3 101 aa9.02□□□□□ -0.97
CCDC78-216ENST00000544996 IGLV7-46A0A075B6I9 117 aa9□□□□□ -0.97
CCDC78-216ENST00000544996 A4D1N5 150 aa9□□□□□ -0.97
CCDC78-216ENST00000544996 COX8AP10176 69 aa9□□□□□ -0.97
CCDC78-216ENST00000544996 SPRR1BP22528 89 aa9□□□□□ -0.97
CCDC78-216ENST00000544996 TAL2Q16559 108 aa8.99□□□□□ -0.97
CCDC78-216ENST00000544996 SMIM11BQ8TCY0 68 aa8.99□□□□□ -0.97
CCDC78-216ENST00000544996 HIST1H4GQ99525 98 aa8.99□□□□□ -0.97
CCDC78-216ENST00000544996 LAMTOR3Q9UHA4 124 aa8.99□□□□□ -0.97
CCDC78-216ENST00000544996 RPS29P62273 56 aaKnown RBP8.97□□□□□ -0.97
CCDC78-216ENST00000544996 VAMP3Q15836 100 aa8.97□□□□□ -0.97
CCDC78-216ENST00000544996 FP248Q71RG6 208 aaPredicted RBP8.97□□□□□ -0.97
CCDC78-216ENST00000544996 DEFB105AQ8NG35 78 aa8.97□□□□□ -0.97
CCDC78-216ENST00000544996 NHP2Q9NX24 153 aaKnown RBP8.97□□□□□ -0.97
CCDC78-216ENST00000544996 TEX49A0A1B0GTD5 131 aa8.96□□□□□ -0.98
CCDC78-216ENST00000544996 TPRXLQ17RH7 258 aa8.95□□□□□ -0.98
CCDC78-216ENST00000544996 COL5A1-AS1Q5SY13 56 aa8.95□□□□□ -0.98
CCDC78-216ENST00000544996 VAMP8Q9BV40 100 aa8.95□□□□□ -0.98
CCDC78-216ENST00000544996 CDIP1Q9H305 208 aa8.95□□□□□ -0.98
CCDC78-216ENST00000544996 PAM16Q9Y3D7 125 aa8.95□□□□□ -0.98
CCDC78-216ENST00000544996 SLC25A20O43772 301 aa8.94□□□□□ -0.98
CCDC78-216ENST00000544996 SPATA45Q537H7 98 aa8.94□□□□□ -0.98
CCDC78-216ENST00000544996 Q1RN00 199 aa8.92□□□□□ -0.98
CCDC78-216ENST00000544996 Q8N377 158 aa8.91□□□□□ -0.98
CCDC78-216ENST00000544996 RNF213Q63HN8 5207 aa8.9□□□□□ -0.98
CCDC78-216ENST00000544996 IGLV5-48A0A075B6I7 105 aa8.9□□□□□ -0.98
CCDC78-216ENST00000544996 HIGD1BQ9P298 99 aa8.9□□□□□ -0.98
CCDC78-216ENST00000544996 UQCR10Q9UDW1 63 aa8.9□□□□□ -0.98
CCDC78-216ENST00000544996 LINC00575Q6W349 94 aa8.88□□□□□ -0.99
CCDC78-216ENST00000544996 LINC01547P58512 204 aaPredicted RBP8.87□□□□□ -0.99
CCDC78-216ENST00000544996 BVES-AS1Q5T3Y7 98 aa8.87□□□□□ -0.99
CCDC78-216ENST00000544996 HRCT1Q6UXD1 115 aa8.87□□□□□ -0.99
CCDC78-216ENST00000544996 LIMD2Q9BT23 127 aa8.87□□□□□ -0.99
CCDC78-216ENST00000544996 hADV29S1A0JD25 119 aa8.86□□□□□ -0.99
CCDC78-216ENST00000544996 SMIM29Q86T20 159 aa8.86□□□□□ -0.99
CCDC78-216ENST00000544996 RAB37Q96AX2 223 aa8.86□□□□□ -0.99
CCDC78-216ENST00000544996 H7C2G1 150 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms