RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 ZNF292O60281 2723 aa3.81□□□□□ -1.8
VPS50-220ENST00000544910 PLA2G2DQ9UNK4 145 aa3.81□□□□□ -1.8
VPS50-220ENST00000544910 ST20-AS1Q8NBB2 130 aa3.81□□□□□ -1.8
VPS50-220ENST00000544910 C16orf90A8MZG2 172 aa3.81□□□□□ -1.8
VPS50-220ENST00000544910 TLX1NBP0CAT3 122 aa3.81□□□□□ -1.8
VPS50-220ENST00000544910 MGAQ8IWI9 3026 aa3.8□□□□□ -1.8
VPS50-220ENST00000544910 MOBPQ13875 183 aa3.8□□□□□ -1.8
VPS50-220ENST00000544910 ACACBO00763 2458 aa3.8□□□□□ -1.8
VPS50-220ENST00000544910 SPINK1P00995 79 aa3.79□□□□□ -1.8
VPS50-220ENST00000544910 FRYLO94915 3013 aa3.79□□□□□ -1.8
VPS50-220ENST00000544910 PKD1L2Q7Z442 2459 aa3.79□□□□□ -1.8
VPS50-220ENST00000544910 UQCR11O14957 56 aa3.79□□□□□ -1.8
VPS50-220ENST00000544910 CIRBP-AS1Q8TBR5 109 aa3.79□□□□□ -1.8
VPS50-220ENST00000544910 LINC00476Q8WZB0 136 aa3.79□□□□□ -1.8
VPS50-220ENST00000544910 Q1T7F1 81 aa3.79□□□□□ -1.8
VPS50-220ENST00000544910 SPANXA2-OT1Q8N9U9 137 aa3.78□□□□□ -1.8
VPS50-220ENST00000544910 MDFIQ99750 246 aa3.78□□□□□ -1.8
VPS50-220ENST00000544910 A8MWP4 228 aa3.78□□□□□ -1.8
VPS50-220ENST00000544910 WDFY4Q6ZS81 3184 aa3.78□□□□□ -1.8
VPS50-220ENST00000544910 IGLV5-52A0A0A0MRZ9 124 aa3.78□□□□□ -1.8
VPS50-220ENST00000544910 PHF5AQ7RTV0 110 aaKnown RBP3.78□□□□□ -1.8
VPS50-220ENST00000544910 ZNF462Q96JM2 2506 aa3.78□□□□□ -1.81
VPS50-220ENST00000544910 CDC42SE1Q9NRR8 79 aa3.77□□□□□ -1.81
VPS50-220ENST00000544910 K7EIL1 84 aa3.77□□□□□ -1.81
VPS50-220ENST00000544910 Q8NDZ9 215 aa3.77□□□□□ -1.81
VPS50-220ENST00000544910 Q8N377 158 aa3.77□□□□□ -1.81
VPS50-220ENST00000544910 IGLV5-37A0A075B6J1 123 aa3.76□□□□□ -1.81
VPS50-220ENST00000544910 EPM2AB3EWF7 344 aa3.76□□□□□ -1.81
VPS50-220ENST00000544910 K7EQZ3 153 aa3.76□□□□□ -1.81
VPS50-220ENST00000544910 LY6G6CO95867 125 aa3.76□□□□□ -1.81
VPS50-220ENST00000544910 SPINT4Q6UDR6 99 aa3.76□□□□□ -1.81
VPS50-220ENST00000544910 NBDYA0A0U1RRE5 68 aa3.76□□□□□ -1.81
VPS50-220ENST00000544910 CHD8Q9HCK8 2581 aa3.75□□□□□ -1.81
VPS50-220ENST00000544910 CASC10Q5T4H9 136 aa3.75□□□□□ -1.81
VPS50-220ENST00000544910 Q5XG85 94 aa3.75□□□□□ -1.81
VPS50-220ENST00000544910 IGKV2D-30A0A075B6S6 120 aa3.75□□□□□ -1.81
VPS50-220ENST00000544910 IGKV2-30P06310 120 aa3.75□□□□□ -1.81
VPS50-220ENST00000544910 MIR22HGQ0VDD5 57 aa3.75□□□□□ -1.81
VPS50-220ENST00000544910 SPTBN4Q9H254 2564 aa3.75□□□□□ -1.81
VPS50-220ENST00000544910 DSPP15924 2871 aaKnown RBP3.74□□□□□ -1.81
VPS50-220ENST00000544910 C1orf134Q5TEV5 83 aa3.74□□□□□ -1.81
VPS50-220ENST00000544910 CACNA1AO00555 2505 aa3.74□□□□□ -1.81
VPS50-220ENST00000544910 CHTF8P0CG12 524 aa3.73□□□□□ -1.81
VPS50-220ENST00000544910 C2CD3Q4AC94 2353 aa3.73□□□□□ -1.81
VPS50-220ENST00000544910 FAM229AH3BQW9 127 aa3.73□□□□□ -1.81
VPS50-220ENST00000544910 IGFL1Q6UW32 110 aa3.73□□□□□ -1.81
VPS50-220ENST00000544910 MRPL34Q9BQ48 92 aaKnown RBP3.73□□□□□ -1.81
VPS50-220ENST00000544910 RTL8CO15255 209 aa3.72□□□□□ -1.81
VPS50-220ENST00000544910 RPL37AP61513 92 aaKnown RBP3.72□□□□□ -1.81
VPS50-220ENST00000544910 CNBPP62633 177 aaKnown RBP3.72□□□□□ -1.81
VPS50-220ENST00000544910 IGLV5-48A0A075B6I7 105 aa3.71□□□□□ -1.81
VPS50-220ENST00000544910 KRTAP26-1Q6PEX3 210 aa3.71□□□□□ -1.81
VPS50-220ENST00000544910 RBM12B-AS1Q9P1G2 102 aa3.71□□□□□ -1.81
VPS50-220ENST00000544910 LINC00313P59037 77 aa3.71□□□□□ -1.82
VPS50-220ENST00000544910 APLNQ9ULZ1 77 aa3.71□□□□□ -1.82
VPS50-220ENST00000544910 BSNQ9UPA5 3926 aa3.71□□□□□ -1.82
VPS50-220ENST00000544910 OCR1Q9BZK8 76 aa3.71□□□□□ -1.82
VPS50-220ENST00000544910 SONP18583 2426 aaKnown RBP3.71□□□□□ -1.82
VPS50-220ENST00000544910 A0A1W2PNN7 141 aa3.71□□□□□ -1.82
VPS50-220ENST00000544910 A0A1W2PNM2 257 aa3.7□□□□□ -1.82
VPS50-220ENST00000544910 SSBP3-AS1Q7Z2R9 100 aa3.7□□□□□ -1.82
VPS50-220ENST00000544910 ZZEF1O43149 2961 aa3.7□□□□□ -1.82
VPS50-220ENST00000544910 BOD1L1Q8NFC6 3051 aa3.7□□□□□ -1.82
VPS50-220ENST00000544910 PTPN13Q12923 2485 aa3.7□□□□□ -1.82
VPS50-220ENST00000544910 ZFHX4Q86UP3 3567 aa3.7□□□□□ -1.82
VPS50-220ENST00000544910 FRYQ5TBA9 3013 aa3.7□□□□□ -1.82
VPS50-220ENST00000544910 Q75L30 129 aa3.7□□□□□ -1.82
VPS50-220ENST00000544910 POLQO75417 2590 aa3.69□□□□□ -1.82
VPS50-220ENST00000544910 MYO18BQ8IUG5 2567 aa3.69□□□□□ -1.82
VPS50-220ENST00000544910 LRBAP50851 2863 aa3.69□□□□□ -1.82
VPS50-220ENST00000544910 C8orf17Q9NRJ1 99 aa3.69□□□□□ -1.82
VPS50-220ENST00000544910 ASPMQ8IZT6 3477 aa3.69□□□□□ -1.82
VPS50-220ENST00000544910 LOC400499M0QZD8 3231 aa3.69□□□□□ -1.82
VPS50-220ENST00000544910 DMXL1Q9Y485 3027 aa3.69□□□□□ -1.82
VPS50-220ENST00000544910 CCDC168Q8NDH2 2452 aa3.68□□□□□ -1.82
VPS50-220ENST00000544910 IGLV8-61A0A075B6I0 122 aa3.68□□□□□ -1.82
VPS50-220ENST00000544910 SPENQ96T58 3664 aaKnown RBP3.68□□□□□ -1.82
VPS50-220ENST00000544910 FP248Q71RG6 208 aaPredicted RBP3.68□□□□□ -1.82
VPS50-220ENST00000544910 A0A0G2JQZ4 141 aa3.67□□□□□ -1.82
VPS50-220ENST00000544910 C9orf163Q8N9P6 203 aa3.67□□□□□ -1.82
VPS50-220ENST00000544910 CRIPTQ9P021 101 aa3.67□□□□□ -1.82
VPS50-220ENST00000544910 USP9XQ93008 2570 aaPredicted RBP3.67□□□□□ -1.82
VPS50-220ENST00000544910 HRNRQ86YZ3 2850 aaPredicted RBP3.67□□□□□ -1.82
VPS50-220ENST00000544910 SPRR1AP35321 89 aa3.67□□□□□ -1.82
VPS50-220ENST00000544910 SPRR4Q96PI1 79 aa3.67□□□□□ -1.82
VPS50-220ENST00000544910 A0A1B0GVX0 72 aa3.66□□□□□ -1.82
VPS50-220ENST00000544910 NBEAQ8NFP9 2946 aa3.66□□□□□ -1.82
VPS50-220ENST00000544910 LINC01554Q52M75 96 aa3.66□□□□□ -1.82
VPS50-220ENST00000544910 CYSTM1Q9H1C7 97 aa3.65□□□□□ -1.82
VPS50-220ENST00000544910 SMG1Q96Q15 3661 aaKnown RBP3.65□□□□□ -1.82
VPS50-220ENST00000544910 USP9YO00507 2555 aaPredicted RBP3.65□□□□□ -1.82
VPS50-220ENST00000544910 A0A087WTM6 91 aa3.65□□□□□ -1.83
VPS50-220ENST00000544910 IGLV7-46A0A075B6I9 117 aa3.64□□□□□ -1.83
VPS50-220ENST00000544910 H3BS24 57 aa3.64□□□□□ -1.83
VPS50-220ENST00000544910 ADGRG4Q8IZF6 3080 aa3.64□□□□□ -1.83
VPS50-220ENST00000544910 DSCR10P59022 87 aa3.64□□□□□ -1.83
VPS50-220ENST00000544910 LINC01558Q9Y6Z2 57 aa3.64□□□□□ -1.83
VPS50-220ENST00000544910 DMXL2Q8TDJ6 3036 aa3.64□□□□□ -1.83
VPS50-220ENST00000544910 ATMQ13315 3056 aa3.63□□□□□ -1.83
VPS50-220ENST00000544910 TLN2Q9Y4G6 2542 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms