RNA–Protein interactions for RNA: ENST00000544754.1

LMO3-231, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 555 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-231ENST00000544754 UBE2BP63146 152 aa7.79□□□□□ -1.16
LMO3-231ENST00000544754 PRYO14603 147 aa7.78□□□□□ -1.16
LMO3-231ENST00000544754 RPL28P46779 137 aaKnown RBP7.78□□□□□ -1.16
LMO3-231ENST00000544754 XGP55808 180 aa7.78□□□□□ -1.16
LMO3-231ENST00000544754 NAA38Q9BRA0 125 aaKnown RBP7.78□□□□□ -1.16
LMO3-231ENST00000544754 KCNQ1DNQ9H478 68 aa7.78□□□□□ -1.16
LMO3-231ENST00000544754 CBY1Q9Y3M2 126 aa7.77□□□□□ -1.17
LMO3-231ENST00000544754 ZNF73O43830 326 aaPredicted RBP7.76□□□□□ -1.17
LMO3-231ENST00000544754 C6orf99Q4VX62 202 aa7.76□□□□□ -1.17
LMO3-231ENST00000544754 C9orf118A6NHY6 69 aa7.75□□□□□ -1.17
LMO3-231ENST00000544754 TRIAP1O43715 76 aa7.75□□□□□ -1.17
LMO3-231ENST00000544754 SPRR1AP35321 89 aa7.75□□□□□ -1.17
LMO3-231ENST00000544754 PSMB2P49721 201 aa7.75□□□□□ -1.17
LMO3-231ENST00000544754 REG3GQ6UW15 175 aa7.75□□□□□ -1.17
LMO3-231ENST00000544754 DIRC1Q969H9 104 aa7.75□□□□□ -1.17
LMO3-231ENST00000544754 DNAH8Q96JB1 4490 aa7.74□□□□□ -1.17
LMO3-231ENST00000544754 PKHD1P08F94 4074 aa7.74□□□□□ -1.17
LMO3-231ENST00000544754 H3BUT2 72 aa7.74□□□□□ -1.17
LMO3-231ENST00000544754 DYNC1H1Q14204 4646 aaKnown RBP7.73□□□□□ -1.17
LMO3-231ENST00000544754 KRTAP4-16G5E9R7 235 aaPredicted RBP7.73□□□□□ -1.17
LMO3-231ENST00000544754 PSORS1C2Q9UIG4 136 aa7.73□□□□□ -1.17
LMO3-231ENST00000544754 ETDCA0A1B0GVM5 59 aa7.71□□□□□ -1.18
LMO3-231ENST00000544754 COX7BP24311 80 aa7.71□□□□□ -1.18
LMO3-231ENST00000544754 LRP1BQ9NZR2 4599 aa7.7□□□□□ -1.18
LMO3-231ENST00000544754 TRBV7-6A0A0J9YX20 115 aa7.7□□□□□ -1.18
LMO3-231ENST00000544754 A0A1W2PPM0 123 aa7.7□□□□□ -1.18
LMO3-231ENST00000544754 B5MCH6 92 aa7.7□□□□□ -1.18
LMO3-231ENST00000544754 CDK2AP2O75956 126 aa7.7□□□□□ -1.18
LMO3-231ENST00000544754 COX6CP09669 75 aa7.7□□□□□ -1.18
LMO3-231ENST00000544754 ELOF1P60002 83 aaKnown RBP7.7□□□□□ -1.18
LMO3-231ENST00000544754 BCE1O60756 84 aa7.69□□□□□ -1.18
LMO3-231ENST00000544754 SMR3BP02814 79 aaPredicted RBP7.69□□□□□ -1.18
LMO3-231ENST00000544754 SCGB1C2P0DMR2 95 aa7.69□□□□□ -1.18
LMO3-231ENST00000544754 VAMP3Q15836 100 aa7.69□□□□□ -1.18
LMO3-231ENST00000544754 C1orf137Q5JT78 98 aa7.69□□□□□ -1.18
LMO3-231ENST00000544754 FAM19A1Q7Z5A9 133 aa7.69□□□□□ -1.18
LMO3-231ENST00000544754 CLEC2BQ92478 149 aa7.69□□□□□ -1.18
LMO3-231ENST00000544754 H0YGX0 51 aa7.68□□□□□ -1.18
LMO3-231ENST00000544754 PRLHP81277 87 aa7.68□□□□□ -1.18
LMO3-231ENST00000544754 Q6ZRX8 168 aa7.68□□□□□ -1.18
LMO3-231ENST00000544754 FABP2P12104 132 aa7.67□□□□□ -1.18
LMO3-231ENST00000544754 LYRM7Q5U5X0 104 aa7.67□□□□□ -1.18
LMO3-231ENST00000544754 FAM218AQ96MZ4 157 aa7.67□□□□□ -1.18
LMO3-231ENST00000544754 UBE2AP49459 152 aa7.66□□□□□ -1.18
LMO3-231ENST00000544754 LINC00575Q6W349 94 aa7.66□□□□□ -1.18
LMO3-231ENST00000544754 KRTAP13-1Q8IUC0 172 aa7.66□□□□□ -1.18
LMO3-231ENST00000544754 H0Y9J4 135 aa7.65□□□□□ -1.18
LMO3-231ENST00000544754 TCL1BO95988 128 aa7.65□□□□□ -1.18
LMO3-231ENST00000544754 Q9BRP9 147 aa7.65□□□□□ -1.18
LMO3-231ENST00000544754 LST1O00453 97 aa7.64□□□□□ -1.19
LMO3-231ENST00000544754 IGLV7-43P04211 117 aa7.64□□□□□ -1.19
LMO3-231ENST00000544754 RPL37AP61513 92 aaKnown RBP7.64□□□□□ -1.19
LMO3-231ENST00000544754 INAFM2P0DMQ5 153 aa7.63□□□□□ -1.19
LMO3-231ENST00000544754 SMCR5Q8TEV8 140 aa7.63□□□□□ -1.19
LMO3-231ENST00000544754 DHRS4-AS1Q9P1J3 65 aa7.63□□□□□ -1.19
LMO3-231ENST00000544754 SPCS1Q9Y6A9 102 aa7.63□□□□□ -1.19
LMO3-231ENST00000544754 TRBV20-1A0A075B6N2 111 aa7.62□□□□□ -1.19
LMO3-231ENST00000544754 A0A1B0GV90 55 aa7.62□□□□□ -1.19
LMO3-231ENST00000544754 A0A1B0GX51 115 aa7.62□□□□□ -1.19
LMO3-231ENST00000544754 hADV29S1A0JD25 119 aa7.62□□□□□ -1.19
LMO3-231ENST00000544754 SLC25A20O43772 301 aa7.62□□□□□ -1.19
LMO3-231ENST00000544754 ZNF861PO60384 105 aa7.62□□□□□ -1.19
LMO3-231ENST00000544754 ERC2-IT1O76042 136 aa7.62□□□□□ -1.19
LMO3-231ENST00000544754 HIGD2AQ9BW72 106 aa7.62□□□□□ -1.19
LMO3-231ENST00000544754 APOBP04114 4563 aaKnown RBP7.61□□□□□ -1.19
LMO3-231ENST00000544754 ATXN8Q156A1 80 aa7.61□□□□□ -1.19
LMO3-231ENST00000544754 EPPK1P58107 5090 aaKnown RBP7.6□□□□□ -1.19
LMO3-231ENST00000544754 K7EP34 96 aa7.6□□□□□ -1.19
LMO3-231ENST00000544754 TRACP01848 142 aa7.6□□□□□ -1.19
LMO3-231ENST00000544754 KRTAP10-4P60372 401 aaPredicted RBP7.6□□□□□ -1.19
LMO3-231ENST00000544754 H3BMG7 143 aa7.58□□□□□ -1.2
LMO3-231ENST00000544754 SNCGO76070 127 aa7.58□□□□□ -1.2
LMO3-231ENST00000544754 Q6ZQY7 126 aa7.58□□□□□ -1.2
LMO3-231ENST00000544754 DNAL4O96015 105 aa7.57□□□□□ -1.2
LMO3-231ENST00000544754 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.57□□□□□ -1.2
LMO3-231ENST00000544754 GTF2H5Q6ZYL4 71 aa7.57□□□□□ -1.2
LMO3-231ENST00000544754 ST20-AS1Q8NBB2 130 aa7.57□□□□□ -1.2
LMO3-231ENST00000544754 KRTAP17-1Q9BYP8 105 aa7.57□□□□□ -1.2
LMO3-231ENST00000544754 PLA2G1BP04054 148 aaKnown RBP7.56□□□□□ -1.2
LMO3-231ENST00000544754 C9JAW5 83 aa7.55□□□□□ -1.2
LMO3-231ENST00000544754 Q5VSD8 79 aa7.55□□□□□ -1.2
LMO3-231ENST00000544754 LINC01547P58512 204 aaPredicted RBP7.54□□□□□ -1.2
LMO3-231ENST00000544754 Q8N1X5 172 aa7.54□□□□□ -1.2
LMO3-231ENST00000544754 MTURNQ8N3F0 131 aa7.54□□□□□ -1.2
LMO3-231ENST00000544754 IGLV5-48A0A075B6I7 105 aa7.53□□□□□ -1.2
LMO3-231ENST00000544754 OCIAD2Q56VL3 154 aa7.53□□□□□ -1.2
LMO3-231ENST00000544754 DEFB105AQ8NG35 78 aa7.53□□□□□ -1.2
LMO3-231ENST00000544754 SPRR4Q96PI1 79 aa7.53□□□□□ -1.2
LMO3-231ENST00000544754 ORMDL1Q9P0S3 153 aa7.53□□□□□ -1.2
LMO3-231ENST00000544754 SRRM2Q9UQ35 2752 aaKnown RBP7.53□□□□□ -1.2
LMO3-231ENST00000544754 RYR1P21817 5038 aa7.52□□□□□ -1.21
LMO3-231ENST00000544754 SPINK6Q6UWN8 80 aa7.52□□□□□ -1.21
LMO3-231ENST00000544754 BAALC-AS2P0C853 105 aa7.51□□□□□ -1.21
LMO3-231ENST00000544754 UBE2V1Q13404 147 aa7.51□□□□□ -1.21
LMO3-231ENST00000544754 GAGE2AQ6NT46 116 aa7.51□□□□□ -1.21
LMO3-231ENST00000544754 Q8N377 158 aa7.51□□□□□ -1.21
LMO3-231ENST00000544754 PRO0461Q9UI25 63 aa7.51□□□□□ -1.21
LMO3-231ENST00000544754 ZNF706Q9Y5V0 76 aaPredicted RBP7.51□□□□□ -1.21
LMO3-231ENST00000544754 KIAA1109Q2LD37 5005 aa7.5□□□□□ -1.21
LMO3-231ENST00000544754 SPRR1BP22528 89 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms