RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.21□□□□□ -1.74
CDCA3-209ENST00000544610 TRAV13-2A0A0B4J235 113 aa4.21□□□□□ -1.74
CDCA3-209ENST00000544610 LECT2O14960 151 aa4.21□□□□□ -1.74
CDCA3-209ENST00000544610 SLPIP03973 132 aa4.21□□□□□ -1.74
CDCA3-209ENST00000544610 C10orf25Q5T742 122 aa4.21□□□□□ -1.74
CDCA3-209ENST00000544610 SND1-IT1Q9HBX3 110 aa4.21□□□□□ -1.74
CDCA3-209ENST00000544610 IGLV5-37A0A075B6J1 123 aa4.2□□□□□ -1.74
CDCA3-209ENST00000544610 OXTP01178 125 aa4.2□□□□□ -1.74
CDCA3-209ENST00000544610 PFN2P35080 140 aa4.2□□□□□ -1.74
CDCA3-209ENST00000544610 LINC01620Q4KN68 170 aa4.2□□□□□ -1.74
CDCA3-209ENST00000544610 COL5A1-AS1Q5SY13 56 aa4.2□□□□□ -1.74
CDCA3-209ENST00000544610 MUSTN1Q8IVN3 82 aa4.2□□□□□ -1.74
CDCA3-209ENST00000544610 RNF213Q63HN8 5207 aa4.2□□□□□ -1.74
CDCA3-209ENST00000544610 PCP4L1A6NKN8 68 aa4.19□□□□□ -1.74
CDCA3-209ENST00000544610 FXYD2P54710 66 aa4.19□□□□□ -1.74
CDCA3-209ENST00000544610 SEC61BP60468 96 aaKnown RBP4.19□□□□□ -1.74
CDCA3-209ENST00000544610 SDIM1Q6ZPB5 146 aa4.19□□□□□ -1.74
CDCA3-209ENST00000544610 Q6ZRP5 223 aa4.19□□□□□ -1.74
CDCA3-209ENST00000544610 CIRBP-AS1Q8TBR5 109 aa4.19□□□□□ -1.74
CDCA3-209ENST00000544610 SNHG12Q9BXW3 62 aa4.19□□□□□ -1.74
CDCA3-209ENST00000544610 CFC1BP0CG36 223 aa4.18□□□□□ -1.74
CDCA3-209ENST00000544610 CFC1P0CG37 223 aa4.18□□□□□ -1.74
CDCA3-209ENST00000544610 C9orf116Q5BN46 136 aaPredicted RBP4.18□□□□□ -1.74
CDCA3-209ENST00000544610 SOSTDC1Q6X4U4 206 aa4.18□□□□□ -1.74
CDCA3-209ENST00000544610 LINC00526Q96FQ7 95 aa4.18□□□□□ -1.74
CDCA3-209ENST00000544610 KRTAP3-1Q9BYR8 98 aa4.18□□□□□ -1.74
CDCA3-209ENST00000544610 TMEM126AQ9H061 195 aa4.18□□□□□ -1.74
CDCA3-209ENST00000544610 PRO1854Q9UHT4 67 aa4.18□□□□□ -1.74
CDCA3-209ENST00000544610 HINT1P49773 126 aaPredicted RBP4.17□□□□□ -1.74
CDCA3-209ENST00000544610 M0R378 163 aa4.16□□□□□ -1.74
CDCA3-209ENST00000544610 IGLV6-57P01721 117 aa4.16□□□□□ -1.74
CDCA3-209ENST00000544610 LYRM7Q5U5X0 104 aa4.16□□□□□ -1.74
CDCA3-209ENST00000544610 DAND5Q8N907 189 aa4.16□□□□□ -1.74
CDCA3-209ENST00000544610 RAB37Q96AX2 223 aa4.16□□□□□ -1.74
CDCA3-209ENST00000544610 NHP2Q9NX24 153 aaKnown RBP4.16□□□□□ -1.74
CDCA3-209ENST00000544610 LRP2P98164 4655 aa4.16□□□□□ -1.74
CDCA3-209ENST00000544610 IGKV2-28A0A075B6P5 120 aa4.15□□□□□ -1.75
CDCA3-209ENST00000544610 TRBV7-6A0A0J9YX20 115 aa4.15□□□□□ -1.75
CDCA3-209ENST00000544610 A0A0U1RRA0 63 aa4.15□□□□□ -1.75
CDCA3-209ENST00000544610 IGKV2D-28P01615 120 aa4.15□□□□□ -1.75
CDCA3-209ENST00000544610 RPL37AP61513 92 aaKnown RBP4.15□□□□□ -1.75
CDCA3-209ENST00000544610 RPL18AQ02543 176 aaKnown RBP4.15□□□□□ -1.75
CDCA3-209ENST00000544610 C9orf129Q5T035 196 aaKnown RBP4.15□□□□□ -1.75
CDCA3-209ENST00000544610 Q75L30 129 aa4.15□□□□□ -1.75
CDCA3-209ENST00000544610 TNXBP22105 4242 aa4.15□□□□□ -1.75
CDCA3-209ENST00000544610 COX6CP09669 75 aa4.14□□□□□ -1.75
CDCA3-209ENST00000544610 RPL28P46779 137 aaKnown RBP4.14□□□□□ -1.75
CDCA3-209ENST00000544610 LINC00337Q8N6G1 96 aa4.14□□□□□ -1.75
CDCA3-209ENST00000544610 SPACA4Q8TDM5 124 aa4.14□□□□□ -1.75
CDCA3-209ENST00000544610 KCNQ1DNQ9H478 68 aa4.14□□□□□ -1.75
CDCA3-209ENST00000544610 XAGE1AQ9HD64 81 aa4.14□□□□□ -1.75
CDCA3-209ENST00000544610 TRBV20-1A0A075B6N2 111 aa4.13□□□□□ -1.75
CDCA3-209ENST00000544610 A0A096LNI7 61 aa4.13□□□□□ -1.75
CDCA3-209ENST00000544610 A0A1B0GX51 115 aa4.13□□□□□ -1.75
CDCA3-209ENST00000544610 H0YGX0 51 aa4.13□□□□□ -1.75
CDCA3-209ENST00000544610 TAX1BP3O14907 124 aa4.13□□□□□ -1.75
CDCA3-209ENST00000544610 MT1HL1P0DM35 61 aa4.13□□□□□ -1.75
CDCA3-209ENST00000544610 NKAPP1Q8N9T2 125 aa4.13□□□□□ -1.75
CDCA3-209ENST00000544610 PLAC8Q9NZF1 115 aa4.13□□□□□ -1.75
CDCA3-209ENST00000544610 NPC2P61916 151 aa4.12□□□□□ -1.75
CDCA3-209ENST00000544610 VAMP3Q15836 100 aa4.12□□□□□ -1.75
CDCA3-209ENST00000544610 BATFQ16520 125 aa4.12□□□□□ -1.75
CDCA3-209ENST00000544610 S100A7L2Q5SY68 101 aa4.12□□□□□ -1.75
CDCA3-209ENST00000544610 MRPL55Q7Z7F7 128 aaKnown RBP4.12□□□□□ -1.75
CDCA3-209ENST00000544610 IGLV1-50A0A075B6I6 118 aa4.11□□□□□ -1.75
CDCA3-209ENST00000544610 H0Y9J4 135 aa4.11□□□□□ -1.75
CDCA3-209ENST00000544610 H3BQ85 93 aa4.11□□□□□ -1.75
CDCA3-209ENST00000544610 PANO1I0J062 215 aa4.11□□□□□ -1.75
CDCA3-209ENST00000544610 SNCGO76070 127 aa4.11□□□□□ -1.75
CDCA3-209ENST00000544610 TSPAN13O95857 204 aa4.11□□□□□ -1.75
CDCA3-209ENST00000544610 SPRR1AP35321 89 aa4.11□□□□□ -1.75
CDCA3-209ENST00000544610 RPL13AP40429 203 aaKnown RBP4.11□□□□□ -1.75
CDCA3-209ENST00000544610 C22orf24Q9Y442 160 aa4.11□□□□□ -1.75
CDCA3-209ENST00000544610 TRAV23DV6A0A075B6W5 121 aa4.1□□□□□ -1.75
CDCA3-209ENST00000544610 A0A1W2PPM0 123 aa4.1□□□□□ -1.75
CDCA3-209ENST00000544610 M0QXV9 152 aa4.1□□□□□ -1.75
CDCA3-209ENST00000544610 FABP2P12104 132 aa4.1□□□□□ -1.75
CDCA3-209ENST00000544610 KRTAP7-1Q8IUC3 87 aa4.1□□□□□ -1.75
CDCA3-209ENST00000544610 Q8NDZ9 215 aa4.1□□□□□ -1.75
CDCA3-209ENST00000544610 OR13C6PQ8NH95 151 aa4.1□□□□□ -1.75
CDCA3-209ENST00000544610 MPLKIPQ8TAP9 179 aa4.1□□□□□ -1.75
CDCA3-209ENST00000544610 C7orf33Q8WU49 177 aa4.1□□□□□ -1.75
CDCA3-209ENST00000544610 A0A087WYN8 130 aa4.09□□□□□ -1.75
CDCA3-209ENST00000544610 IGKV2-24A0A0C4DH68 120 aa4.09□□□□□ -1.75
CDCA3-209ENST00000544610 TRBV10-3A0A0K0K1G6 114 aa4.09□□□□□ -1.75
CDCA3-209ENST00000544610 A0A1W2PNN7 141 aa4.09□□□□□ -1.75
CDCA3-209ENST00000544610 K7ERJ3 54 aa4.09□□□□□ -1.75
CDCA3-209ENST00000544610 ZNF73O43830 326 aaPredicted RBP4.09□□□□□ -1.75
CDCA3-209ENST00000544610 Q1RN00 199 aa4.09□□□□□ -1.75
CDCA3-209ENST00000544610 SMIM11BQ8TCY0 68 aa4.09□□□□□ -1.75
CDCA3-209ENST00000544610 DIRC1Q969H9 104 aa4.09□□□□□ -1.75
CDCA3-209ENST00000544610 KRTAP4-16G5E9R7 235 aaPredicted RBP4.08□□□□□ -1.76
CDCA3-209ENST00000544610 H3BUT2 72 aa4.08□□□□□ -1.76
CDCA3-209ENST00000544610 NCR3O14931 201 aa4.08□□□□□ -1.76
CDCA3-209ENST00000544610 TRACP01848 142 aa4.08□□□□□ -1.76
CDCA3-209ENST00000544610 PSMB2P49721 201 aa4.08□□□□□ -1.76
CDCA3-209ENST00000544610 PRR3P79522 188 aaKnown RBP4.08□□□□□ -1.76
CDCA3-209ENST00000544610 GTF2H5Q6ZYL4 71 aa4.08□□□□□ -1.76
CDCA3-209ENST00000544610 LINC01600Q96MT4 127 aa4.08□□□□□ -1.76
CDCA3-209ENST00000544610 LINC00167Q96N53 147 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms