RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 JMJD1CQ15652 2540 aa10.07□□□□□ -0.8
CHD4-210ENST00000544040 COL4A2P08572 1712 aa10.06□□□□□ -0.8
CHD4-210ENST00000544040 KRTAP10-11P60412 298 aa10.06□□□□□ -0.8
CHD4-210ENST00000544040 WWC2-AS2Q96NR7 200 aa10.06□□□□□ -0.8
CHD4-210ENST00000544040 ZNF575Q86XF7 245 aa10.04□□□□□ -0.8
CHD4-210ENST00000544040 ABCA12Q86UK0 2595 aa10.02□□□□□ -0.81
CHD4-210ENST00000544040 PRR34Q9NV39 138 aa10.02□□□□□ -0.81
CHD4-210ENST00000544040 TLN1Q9Y490 2541 aaKnown RBP10□□□□□ -0.81
CHD4-210ENST00000544040 A0A1W2PNM2 257 aa10□□□□□ -0.81
CHD4-210ENST00000544040 RBM12B-AS1Q9P1G2 102 aa10□□□□□ -0.81
CHD4-210ENST00000544040 WDR87Q6ZQQ6 2873 aa10□□□□□ -0.81
CHD4-210ENST00000544040 CASC10Q5T4H9 136 aa9.99□□□□□ -0.81
CHD4-210ENST00000544040 LUZP6Q538Z0 58 aa9.99□□□□□ -0.81
CHD4-210ENST00000544040 A0A087WTM6 91 aa9.98□□□□□ -0.81
CHD4-210ENST00000544040 K7EIL1 84 aa9.97□□□□□ -0.81
CHD4-210ENST00000544040 IGLV7-43P04211 117 aa9.97□□□□□ -0.81
CHD4-210ENST00000544040 PSORS1C2Q9UIG4 136 aa9.97□□□□□ -0.81
CHD4-210ENST00000544040 C9orf163Q8N9P6 203 aa9.96□□□□□ -0.82
CHD4-210ENST00000544040 SPANXA2-OT1Q8N9U9 137 aa9.95□□□□□ -0.82
CHD4-210ENST00000544040 PRR26Q8N8Z3 221 aa9.95□□□□□ -0.82
CHD4-210ENST00000544040 ZNF462Q96JM2 2506 aa9.95□□□□□ -0.82
CHD4-210ENST00000544040 TLN2Q9Y4G6 2542 aa9.95□□□□□ -0.82
CHD4-210ENST00000544040 KLK9Q2XQG4 91 aa9.95□□□□□ -0.82
CHD4-210ENST00000544040 SPRR4Q96PI1 79 aa9.94□□□□□ -0.82
CHD4-210ENST00000544040 PLA2G2DQ9UNK4 145 aa9.94□□□□□ -0.82
CHD4-210ENST00000544040 GIG44P09565 113 aaPredicted RBP9.93□□□□□ -0.82
CHD4-210ENST00000544040 TLX1NBP0CAT3 122 aa9.93□□□□□ -0.82
CHD4-210ENST00000544040 KRTAP10-3P60369 221 aa9.91□□□□□ -0.82
CHD4-210ENST00000544040 ZFYVE26Q68DK2 2539 aa9.9□□□□□ -0.82
CHD4-210ENST00000544040 Q1T7F1 81 aa9.89□□□□□ -0.83
CHD4-210ENST00000544040 C19orf73Q9NVV2 129 aa9.88□□□□□ -0.83
CHD4-210ENST00000544040 SETD2Q9BYW2 2564 aaPredicted RBP9.86□□□□□ -0.83
CHD4-210ENST00000544040 WIPF1O43516 503 aa9.85□□□□□ -0.83
CHD4-210ENST00000544040 USP9XQ93008 2570 aaPredicted RBP9.85□□□□□ -0.83
CHD4-210ENST00000544040 OCR1Q9BZK8 76 aa9.83□□□□□ -0.84
CHD4-210ENST00000544040 PKD1L2Q7Z442 2459 aa9.82□□□□□ -0.84
CHD4-210ENST00000544040 CAMK2N1Q7Z7J9 78 aa9.82□□□□□ -0.84
CHD4-210ENST00000544040 F8P00451 2351 aa9.81□□□□□ -0.84
CHD4-210ENST00000544040 LINC00612Q8N6U2 182 aa9.81□□□□□ -0.84
CHD4-210ENST00000544040 PCSK5Q92824 1860 aa9.81□□□□□ -0.84
CHD4-210ENST00000544040 A0A1B0GU33 70 aa9.81□□□□□ -0.84
CHD4-210ENST00000544040 FAM229BQ4G0N7 80 aa9.8□□□□□ -0.84
CHD4-210ENST00000544040 PRAC1Q96KF2 57 aa9.8□□□□□ -0.84
CHD4-210ENST00000544040 HRES1P13985 223 aa9.77□□□□□ -0.84
CHD4-210ENST00000544040 CNBPP62633 177 aaKnown RBP9.77□□□□□ -0.85
CHD4-210ENST00000544040 LINC00483Q53H64 154 aa9.76□□□□□ -0.85
CHD4-210ENST00000544040 Q6ZSA8 131 aa9.75□□□□□ -0.85
CHD4-210ENST00000544040 H3BS24 57 aa9.75□□□□□ -0.85
CHD4-210ENST00000544040 Q75L30 129 aa9.74□□□□□ -0.85
CHD4-210ENST00000544040 IGLV7-46A0A075B6I9 117 aa9.74□□□□□ -0.85
CHD4-210ENST00000544040 PIEZO1Q92508 2521 aa9.71□□□□□ -0.86
CHD4-210ENST00000544040 CENPFP49454 3210 aa9.7□□□□□ -0.86
CHD4-210ENST00000544040 Q5XG85 94 aa9.67□□□□□ -0.86
CHD4-210ENST00000544040 A0A096LNT2 108 aa9.66□□□□□ -0.86
CHD4-210ENST00000544040 M0R2T5 61 aa9.66□□□□□ -0.86
CHD4-210ENST00000544040 CSAG1Q6PB30 78 aa9.66□□□□□ -0.86
CHD4-210ENST00000544040 Q8N9P0 234 aaPredicted RBP9.66□□□□□ -0.86
CHD4-210ENST00000544040 CYSTM1Q9H1C7 97 aa9.64□□□□□ -0.87
CHD4-210ENST00000544040 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.64□□□□□ -0.87
CHD4-210ENST00000544040 USP9YO00507 2555 aaPredicted RBP9.64□□□□□ -0.87
CHD4-210ENST00000544040 TNP2Q05952 138 aa9.64□□□□□ -0.87
CHD4-210ENST00000544040 CR1P17927 2039 aa9.64□□□□□ -0.87
CHD4-210ENST00000544040 ACANP16112 2415 aa9.63□□□□□ -0.87
CHD4-210ENST00000544040 ANKRD17O75179 2603 aaKnown RBP9.62□□□□□ -0.87
CHD4-210ENST00000544040 LINC01558Q9Y6Z2 57 aa9.62□□□□□ -0.87
CHD4-210ENST00000544040 S4R3F8 94 aa9.6□□□□□ -0.87
CHD4-210ENST00000544040 FP248Q71RG6 208 aaPredicted RBP9.6□□□□□ -0.87
CHD4-210ENST00000544040 MMP24-AS1A0A0U1RRL7 71 aa9.59□□□□□ -0.87
CHD4-210ENST00000544040 SPINK7P58062 85 aa9.59□□□□□ -0.87
CHD4-210ENST00000544040 ANKRD11Q6UB99 2663 aaPredicted RBP9.59□□□□□ -0.87
CHD4-210ENST00000544040 MTORP42345 2549 aa9.59□□□□□ -0.87
CHD4-210ENST00000544040 DMAC1Q96GE9 116 aa9.58□□□□□ -0.88
CHD4-210ENST00000544040 Q5VV11 94 aa9.57□□□□□ -0.88
CHD4-210ENST00000544040 ZCCHC13Q8WW36 166 aaKnown RBP9.56□□□□□ -0.88
CHD4-210ENST00000544040 POLQO75417 2590 aa9.56□□□□□ -0.88
CHD4-210ENST00000544040 A0A0A0MQY5 61 aa9.56□□□□□ -0.88
CHD4-210ENST00000544040 Q5W150 140 aa9.51□□□□□ -0.89
CHD4-210ENST00000544040 Q8NDZ9 215 aa9.51□□□□□ -0.89
CHD4-210ENST00000544040 CEP295Q9C0D2 2601 aa9.5□□□□□ -0.89
CHD4-210ENST00000544040 EP400Q96L91 3159 aa9.49□□□□□ -0.89
CHD4-210ENST00000544040 CHD8Q9HCK8 2581 aa9.47□□□□□ -0.89
CHD4-210ENST00000544040 KRTAP1-3Q8IUG1 177 aa9.45□□□□□ -0.9
CHD4-210ENST00000544040 SPTBN4Q9H254 2564 aa9.45□□□□□ -0.9
CHD4-210ENST00000544040 R4GN34 69 aa9.45□□□□□ -0.9
CHD4-210ENST00000544040 KRTAP1-1Q07627 177 aa9.4□□□□□ -0.9
CHD4-210ENST00000544040 ROMO1P60602 79 aa9.39□□□□□ -0.91
CHD4-210ENST00000544040 LINC00472Q9H8W2 130 aa9.38□□□□□ -0.91
CHD4-210ENST00000544040 OXTP01178 125 aa9.37□□□□□ -0.91
CHD4-210ENST00000544040 PLAC8Q9NZF1 115 aa9.37□□□□□ -0.91
CHD4-210ENST00000544040 RPL37P61927 97 aaKnown RBP9.34□□□□□ -0.91
CHD4-210ENST00000544040 SPRR1AP35321 89 aa9.34□□□□□ -0.91
CHD4-210ENST00000544040 SPATA8Q6RVD6 105 aa9.31□□□□□ -0.92
CHD4-210ENST00000544040 M0QZ58 72 aa9.3□□□□□ -0.92
CHD4-210ENST00000544040 H1FX-AS1Q4G0G2 97 aa9.3□□□□□ -0.92
CHD4-210ENST00000544040 KRTAP26-1Q6PEX3 210 aa9.29□□□□□ -0.92
CHD4-210ENST00000544040 GOLGB1Q14789 3259 aaKnown RBP9.28□□□□□ -0.92
CHD4-210ENST00000544040 FASNP49327 2511 aaKnown RBP9.26□□□□□ -0.93
CHD4-210ENST00000544040 BPTFQ12830 3046 aa9.23□□□□□ -0.93
CHD4-210ENST00000544040 SPRR1BP22528 89 aa9.22□□□□□ -0.93
CHD4-210ENST00000544040 ADM2Q7Z4H4 148 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms