RNA–Protein interactions for RNA: ENST00000542381.1

SRGAP1-204, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 360 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-204ENST00000542381 SMG1Q96Q15 3661 aaKnown RBP0.82□□□□□ -2.28
SRGAP1-204ENST00000542381 TNRC6CQ9HCJ0 1690 aaKnown RBP0.82□□□□□ -2.28
SRGAP1-204ENST00000542381 QSER1Q2KHR3 1735 aa0.82□□□□□ -2.28
SRGAP1-204ENST00000542381 CHD9Q3L8U1 2897 aa0.82□□□□□ -2.28
SRGAP1-204ENST00000542381 MYO15AQ9UKN7 3530 aa0.82□□□□□ -2.28
SRGAP1-204ENST00000542381 TSC2P49815 1807 aa0.82□□□□□ -2.28
SRGAP1-204ENST00000542381 CDH23Q9H251 3354 aa0.82□□□□□ -2.28
SRGAP1-204ENST00000542381 NRXN3Q9Y4C0 1643 aa0.82□□□□□ -2.28
SRGAP1-204ENST00000542381 ZNF831Q5JPB2 1677 aa0.81□□□□□ -2.28
SRGAP1-204ENST00000542381 EEA1Q15075 1411 aa0.81□□□□□ -2.28
SRGAP1-204ENST00000542381 PARP4Q9UKK3 1724 aaKnown RBP0.81□□□□□ -2.28
SRGAP1-204ENST00000542381 PKDREJQ9NTG1 2253 aa0.81□□□□□ -2.28
SRGAP1-204ENST00000542381 NEXMIFQ5QGS0 1516 aa0.81□□□□□ -2.28
SRGAP1-204ENST00000542381 ASXL1Q8IXJ9 1541 aa0.81□□□□□ -2.28
SRGAP1-204ENST00000542381 I3L2K1 104 aa0.81□□□□□ -2.28
SRGAP1-204ENST00000542381 PIGYQ3MUY2 71 aa0.81□□□□□ -2.28
SRGAP1-204ENST00000542381 LINC00846Q9NV44 126 aa0.81□□□□□ -2.28
SRGAP1-204ENST00000542381 RABAC1Q9UI14 185 aa0.81□□□□□ -2.28
SRGAP1-204ENST00000542381 EP300Q09472 2414 aaPredicted RBP0.81□□□□□ -2.28
SRGAP1-204ENST00000542381 SAMD9LQ8IVG5 1584 aa0.81□□□□□ -2.28
SRGAP1-204ENST00000542381 UBR5O95071 2799 aaPredicted RBP0.81□□□□□ -2.28
SRGAP1-204ENST00000542381 ABCA9Q8IUA7 1624 aa0.81□□□□□ -2.28
SRGAP1-204ENST00000542381 SETD2Q9BYW2 2564 aaPredicted RBP0.81□□□□□ -2.28
SRGAP1-204ENST00000542381 MROH2AA6NES4 1674 aa0.81□□□□□ -2.28
SRGAP1-204ENST00000542381 ATRQ13535 2644 aa0.81□□□□□ -2.28
SRGAP1-204ENST00000542381 TIAM2Q8IVF5 1701 aa0.81□□□□□ -2.28
SRGAP1-204ENST00000542381 CFAP46Q8IYW2 2715 aa0.8□□□□□ -2.28
SRGAP1-204ENST00000542381 ATP7AQ04656 1500 aa0.8□□□□□ -2.28
SRGAP1-204ENST00000542381 LMTK2Q8IWU2 1503 aa0.8□□□□□ -2.28
SRGAP1-204ENST00000542381 UBR3Q6ZT12 1888 aa0.8□□□□□ -2.28
SRGAP1-204ENST00000542381 UGGT1Q9NYU2 1555 aa0.8□□□□□ -2.28
SRGAP1-204ENST00000542381 ETDBQ3ZM63 59 aa0.8□□□□□ -2.28
SRGAP1-204ENST00000542381 DEFB107AQ8IZN7 70 aa0.8□□□□□ -2.28
SRGAP1-204ENST00000542381 S100A13Q99584 98 aa0.8□□□□□ -2.28
SRGAP1-204ENST00000542381 PLCH1Q4KWH8 1693 aa0.8□□□□□ -2.28
SRGAP1-204ENST00000542381 SPTA1P02549 2419 aa0.8□□□□□ -2.28
SRGAP1-204ENST00000542381 LRRK2Q5S007 2527 aa0.8□□□□□ -2.28
SRGAP1-204ENST00000542381 FRYQ5TBA9 3013 aa0.8□□□□□ -2.28
SRGAP1-204ENST00000542381 NCOA2Q15596 1464 aa0.8□□□□□ -2.28
SRGAP1-204ENST00000542381 LOC400499M0QZD8 3231 aa0.79□□□□□ -2.28
SRGAP1-204ENST00000542381 TOP2AP11388 1531 aaKnown RBP0.79□□□□□ -2.28
SRGAP1-204ENST00000542381 AGLP35573 1532 aa0.79□□□□□ -2.28
SRGAP1-204ENST00000542381 DNHD1Q96M86 4753 aa0.79□□□□□ -2.28
SRGAP1-204ENST00000542381 ABCA6Q8N139 1617 aa0.79□□□□□ -2.28
SRGAP1-204ENST00000542381 MROH1Q8NDA8 1641 aa0.79□□□□□ -2.28
SRGAP1-204ENST00000542381 BOD1L1Q8NFC6 3051 aa0.79□□□□□ -2.28
SRGAP1-204ENST00000542381 A0A0G2JMZ2 1700 aa0.79□□□□□ -2.28
SRGAP1-204ENST00000542381 F8WEM9 126 aa0.79□□□□□ -2.28
SRGAP1-204ENST00000542381 WFDC2Q14508 124 aa0.79□□□□□ -2.28
SRGAP1-204ENST00000542381 ZNF720Q7Z2F6 126 aa0.79□□□□□ -2.28
SRGAP1-204ENST00000542381 PSENENQ9NZ42 101 aa0.79□□□□□ -2.28
SRGAP1-204ENST00000542381 DMXL1Q9Y485 3027 aa0.79□□□□□ -2.28
SRGAP1-204ENST00000542381 PIK3C2BO00750 1634 aa0.78□□□□□ -2.28
SRGAP1-204ENST00000542381 FRYLO94915 3013 aa0.78□□□□□ -2.28
SRGAP1-204ENST00000542381 NRAPQ86VF7 1730 aa0.78□□□□□ -2.28
SRGAP1-204ENST00000542381 FREM2Q5SZK8 3169 aa0.78□□□□□ -2.28
SRGAP1-204ENST00000542381 TEX15Q9BXT5 2789 aa0.78□□□□□ -2.28
SRGAP1-204ENST00000542381 TRBV7-4A0A0J9YYF1 115 aa0.78□□□□□ -2.28
SRGAP1-204ENST00000542381 NMSQ5H8A3 153 aa0.78□□□□□ -2.28
SRGAP1-204ENST00000542381 ALKAL2Q6UX46 152 aa0.78□□□□□ -2.28
SRGAP1-204ENST00000542381 COL12A1Q99715 3063 aa0.78□□□□□ -2.28
SRGAP1-204ENST00000542381 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.78□□□□□ -2.28
SRGAP1-204ENST00000542381 WDFY3Q8IZQ1 3526 aa0.78□□□□□ -2.28
SRGAP1-204ENST00000542381 ANKHD1Q8IWZ3 2542 aaKnown RBP0.78□□□□□ -2.28
SRGAP1-204ENST00000542381 NBEAL2Q6ZNJ1 2754 aa0.78□□□□□ -2.29
SRGAP1-204ENST00000542381 PDZD2O15018 2839 aa0.78□□□□□ -2.29
SRGAP1-204ENST00000542381 CSMD1Q96PZ7 3565 aa0.77□□□□□ -2.29
SRGAP1-204ENST00000542381 ARMS2P0C7Q2 107 aa0.77□□□□□ -2.29
SRGAP1-204ENST00000542381 SNRPFP62306 86 aaKnown RBP0.77□□□□□ -2.29
SRGAP1-204ENST00000542381 ST20Q9HBF5 79 aa0.77□□□□□ -2.29
SRGAP1-204ENST00000542381 ABCA10Q8WWZ4 1543 aa0.77□□□□□ -2.29
SRGAP1-204ENST00000542381 COL6A5A8TX70 2615 aa0.77□□□□□ -2.29
SRGAP1-204ENST00000542381 FLNCQ14315 2725 aa0.77□□□□□ -2.29
SRGAP1-204ENST00000542381 TENM4Q6N022 2769 aa0.77□□□□□ -2.29
SRGAP1-204ENST00000542381 VPS13AQ96RL7 3174 aa0.77□□□□□ -2.29
SRGAP1-204ENST00000542381 SPENQ96T58 3664 aaKnown RBP0.77□□□□□ -2.29
SRGAP1-204ENST00000542381 CELSR1Q9NYQ6 3014 aa0.76□□□□□ -2.29
SRGAP1-204ENST00000542381 WDR87Q6ZQQ6 2873 aa0.76□□□□□ -2.29
SRGAP1-204ENST00000542381 DOT1LQ8TEK3 1739 aa0.76□□□□□ -2.29
SRGAP1-204ENST00000542381 UGGT2Q9NYU1 1516 aa0.76□□□□□ -2.29
SRGAP1-204ENST00000542381 NKTRP30414 1462 aaKnown RBP0.76□□□□□ -2.29
SRGAP1-204ENST00000542381 CCDC141Q6ZP82 1450 aa0.76□□□□□ -2.29
SRGAP1-204ENST00000542381 LINC00959A0A1B0GUT2 108 aa0.76□□□□□ -2.29
SRGAP1-204ENST00000542381 H0Y9P7 68 aa0.76□□□□□ -2.29
SRGAP1-204ENST00000542381 HMGN2P05204 90 aaKnown RBP0.76□□□□□ -2.29
SRGAP1-204ENST00000542381 GNGT1P63211 74 aa0.76□□□□□ -2.29
SRGAP1-204ENST00000542381 HMGN3Q15651 99 aa0.76□□□□□ -2.29
SRGAP1-204ENST00000542381 ADIRFQ15847 76 aa0.76□□□□□ -2.29
SRGAP1-204ENST00000542381 Q5BKY6 102 aa0.76□□□□□ -2.29
SRGAP1-204ENST00000542381 NBEAL1Q6ZS30 2694 aa0.76□□□□□ -2.29
SRGAP1-204ENST00000542381 TLN1Q9Y490 2541 aaKnown RBP0.76□□□□□ -2.29
SRGAP1-204ENST00000542381 LAMA5O15230 3695 aa0.76□□□□□ -2.29
SRGAP1-204ENST00000542381 NBEAQ8NFP9 2946 aa0.75□□□□□ -2.29
SRGAP1-204ENST00000542381 PKD1L1Q8TDX9 2849 aa0.75□□□□□ -2.29
SRGAP1-204ENST00000542381 FLNAP21333 2647 aaKnown RBP0.75□□□□□ -2.29
SRGAP1-204ENST00000542381 STAB1Q9NY15 2570 aa0.75□□□□□ -2.29
SRGAP1-204ENST00000542381 ERICH3Q5RHP9 1530 aa0.75□□□□□ -2.29
SRGAP1-204ENST00000542381 CCDC168Q8NDH2 2452 aa0.75□□□□□ -2.29
SRGAP1-204ENST00000542381 TRIOO75962 3097 aa0.75□□□□□ -2.29
SRGAP1-204ENST00000542381 A0A1B0GU69 56 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms