RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 NCBP2-AS2Q69YL0 99 aa1.17□□□□□ -2.22
LEMD3-204ENST00000542032 DEFB123Q8N688 67 aa1.17□□□□□ -2.22
LEMD3-204ENST00000542032 CNFNQ9BYD5 112 aa1.17□□□□□ -2.22
LEMD3-204ENST00000542032 C10orf95Q9H7T3 257 aa1.17□□□□□ -2.22
LEMD3-204ENST00000542032 NRXN3Q9Y4C0 1643 aa1.16□□□□□ -2.22
LEMD3-204ENST00000542032 ETDCA0A1B0GVM5 59 aa1.16□□□□□ -2.22
LEMD3-204ENST00000542032 K7EQZ3 153 aa1.16□□□□□ -2.22
LEMD3-204ENST00000542032 NMES1Q9C002 83 aa1.16□□□□□ -2.22
LEMD3-204ENST00000542032 KCNQ1DNQ9H478 68 aa1.16□□□□□ -2.22
LEMD3-204ENST00000542032 AGLP35573 1532 aa1.15□□□□□ -2.22
LEMD3-204ENST00000542032 TJP1Q07157 1748 aa1.15□□□□□ -2.22
LEMD3-204ENST00000542032 M0R1W7 72 aa1.15□□□□□ -2.23
LEMD3-204ENST00000542032 COX6A2Q02221 97 aa1.15□□□□□ -2.23
LEMD3-204ENST00000542032 PRO0255Q9UI72 69 aa1.15□□□□□ -2.23
LEMD3-204ENST00000542032 LY75O60449 1722 aa1.15□□□□□ -2.23
LEMD3-204ENST00000542032 C3P01024 1663 aa1.14□□□□□ -2.23
LEMD3-204ENST00000542032 SERF2P84101 59 aa1.14□□□□□ -2.23
LEMD3-204ENST00000542032 DEFB114Q30KQ6 69 aa1.14□□□□□ -2.23
LEMD3-204ENST00000542032 MRPL34Q9BQ48 92 aaKnown RBP1.14□□□□□ -2.23
LEMD3-204ENST00000542032 DDX60LQ5H9U9 1706 aaKnown RBP1.14□□□□□ -2.23
LEMD3-204ENST00000542032 JMJD1CQ15652 2540 aa1.14□□□□□ -2.23
LEMD3-204ENST00000542032 DEFB131BA0A096LNP1 70 aa1.13□□□□□ -2.23
LEMD3-204ENST00000542032 A0A0D9SG42 100 aa1.13□□□□□ -2.23
LEMD3-204ENST00000542032 MRPL33O75394 65 aaKnown RBP1.13□□□□□ -2.23
LEMD3-204ENST00000542032 Q8IZM0 81 aa1.13□□□□□ -2.23
LEMD3-204ENST00000542032 ANKRD36CQ5JPF3 1778 aa1.12□□□□□ -2.23
LEMD3-204ENST00000542032 PRH1P02810 166 aa1.12□□□□□ -2.23
LEMD3-204ENST00000542032 CRIP1P50238 77 aa1.12□□□□□ -2.23
LEMD3-204ENST00000542032 KRTAP21-3Q3LHN1 58 aa1.12□□□□□ -2.23
LEMD3-204ENST00000542032 FAM208BQ5VWN6 2430 aa1.11□□□□□ -2.23
LEMD3-204ENST00000542032 ASH1LQ9NR48 2969 aaKnown RBP1.11□□□□□ -2.23
LEMD3-204ENST00000542032 ROS1P08922 2347 aa1.11□□□□□ -2.23
LEMD3-204ENST00000542032 CCL22O00626 93 aa1.11□□□□□ -2.23
LEMD3-204ENST00000542032 COL6A6A6NMZ7 2263 aa1.1□□□□□ -2.23
LEMD3-204ENST00000542032 DOPEY2Q9Y3R5 2298 aa1.1□□□□□ -2.23
LEMD3-204ENST00000542032 LMO7Q8WWI1 1683 aa1.1□□□□□ -2.23
LEMD3-204ENST00000542032 FAM208AQ9UK61 1670 aaKnown RBP1.1□□□□□ -2.23
LEMD3-204ENST00000542032 DDX60Q8IY21 1712 aaKnown RBP1.1□□□□□ -2.23
LEMD3-204ENST00000542032 IGIPA6NJ69 53 aa1.1□□□□□ -2.23
LEMD3-204ENST00000542032 KRTAP10-4P60372 401 aaPredicted RBP1.1□□□□□ -2.23
LEMD3-204ENST00000542032 TOMM5Q8N4H5 51 aa1.1□□□□□ -2.23
LEMD3-204ENST00000542032 CMC2Q9NRP2 79 aa1.1□□□□□ -2.23
LEMD3-204ENST00000542032 TNRC6CQ9HCJ0 1690 aaKnown RBP1.1□□□□□ -2.23
LEMD3-204ENST00000542032 NFAT5O94916 1531 aa1.1□□□□□ -2.23
LEMD3-204ENST00000542032 NDUFA3O95167 84 aa1.09□□□□□ -2.23
LEMD3-204ENST00000542032 COX6B1P14854 86 aa1.09□□□□□ -2.23
LEMD3-204ENST00000542032 COX6B2Q6YFQ2 88 aa1.09□□□□□ -2.23
LEMD3-204ENST00000542032 CDKN2A-AS1Q9UH64 79 aa1.09□□□□□ -2.23
LEMD3-204ENST00000542032 CACNA1EQ15878 2313 aa1.09□□□□□ -2.24
LEMD3-204ENST00000542032 PLCE1Q9P212 2302 aa1.08□□□□□ -2.24
LEMD3-204ENST00000542032 PLNP26678 52 aa1.08□□□□□ -2.24
LEMD3-204ENST00000542032 APLNQ9ULZ1 77 aa1.08□□□□□ -2.24
LEMD3-204ENST00000542032 GOLGB1Q14789 3259 aaKnown RBP1.07□□□□□ -2.24
LEMD3-204ENST00000542032 AHNAK2Q8IVF2 5795 aa1.07□□□□□ -2.24
LEMD3-204ENST00000542032 SPRR1AP35321 89 aa1.07□□□□□ -2.24
LEMD3-204ENST00000542032 PRO3102Q9H379 93 aa1.07□□□□□ -2.24
LEMD3-204ENST00000542032 C4AP0C0L4 1744 aa1.06□□□□□ -2.24
LEMD3-204ENST00000542032 C4BP0C0L5 1744 aa1.06□□□□□ -2.24
LEMD3-204ENST00000542032 TENM1Q9UKZ4 2725 aa1.06□□□□□ -2.24
LEMD3-204ENST00000542032 EP400Q96L91 3159 aa1.06□□□□□ -2.24
LEMD3-204ENST00000542032 TOGARAM1Q9Y4F4 1720 aa1.06□□□□□ -2.24
LEMD3-204ENST00000542032 PCNTO95613 3336 aa1.05□□□□□ -2.24
LEMD3-204ENST00000542032 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.05□□□□□ -2.242e-8■■■■■ 31.6
LEMD3-204ENST00000542032 SPRR1BP22528 89 aa1.05□□□□□ -2.24
LEMD3-204ENST00000542032 LINC00158P58513 81 aa1.05□□□□□ -2.24
LEMD3-204ENST00000542032 LELP1Q5T871 98 aa1.05□□□□□ -2.24
LEMD3-204ENST00000542032 Q5VSD8 79 aa1.05□□□□□ -2.24
LEMD3-204ENST00000542032 ABRACLQ9P1F3 81 aa1.05□□□□□ -2.24
LEMD3-204ENST00000542032 USF3Q68DE3 2245 aa1.05□□□□□ -2.24
LEMD3-204ENST00000542032 SRCAPQ6ZRS2 3230 aa1.04□□□□□ -2.24
LEMD3-204ENST00000542032 UTRNP46939 3433 aa1.04□□□□□ -2.24
LEMD3-204ENST00000542032 H0YGX0 51 aa1.04□□□□□ -2.24
LEMD3-204ENST00000542032 CNOT1A5YKK6 2376 aaKnown RBP1.04□□□□□ -2.24
LEMD3-204ENST00000542032 CEP350Q5VT06 3117 aa1.03□□□□□ -2.24
LEMD3-204ENST00000542032 PDE4DIPQ5VU43 2346 aa1.03□□□□□ -2.24
LEMD3-204ENST00000542032 PTPRQQ9UMZ3 2332 aa1.03□□□□□ -2.24
LEMD3-204ENST00000542032 SMIM27A0A1W2PRY6 76 aa1.03□□□□□ -2.24
LEMD3-204ENST00000542032 PRB3Q04118 309 aaPredicted RBP1.03□□□□□ -2.24
LEMD3-204ENST00000542032 H1FX-AS1Q4G0G2 97 aa1.03□□□□□ -2.24
LEMD3-204ENST00000542032 DEFB105AQ8NG35 78 aa1.03□□□□□ -2.24
LEMD3-204ENST00000542032 PIEZO2Q9H5I5 2752 aa1.02□□□□□ -2.25
LEMD3-204ENST00000542032 LOC730098B7Z3J9 87 aa1.02□□□□□ -2.25
LEMD3-204ENST00000542032 WFDC13Q8IUB5 93 aa1.02□□□□□ -2.25
LEMD3-204ENST00000542032 PTPRZ1P23471 2315 aaPredicted RBP1.01□□□□□ -2.25
LEMD3-204ENST00000542032 CENPFP49454 3210 aa1.01□□□□□ -2.25
LEMD3-204ENST00000542032 DUOX1Q9NRD9 1551 aa1.01□□□□□ -2.25
LEMD3-204ENST00000542032 TIMM8BQ9Y5J9 83 aaPredicted RBP1.01□□□□□ -2.25
LEMD3-204ENST00000542032 LYNX1G3V0Z9 82 aa1□□□□□ -2.25
LEMD3-204ENST00000542032 H0YAA0 97 aa1□□□□□ -2.25
LEMD3-204ENST00000542032 KLK9Q2XQG4 91 aa1□□□□□ -2.25
LEMD3-204ENST00000542032 DNAH12Q6ZR08 3092 aa1□□□□□ -2.25
LEMD3-204ENST00000542032 KNL1Q8NG31 2342 aa1□□□□□ -2.25
LEMD3-204ENST00000542032 HELZ2Q9BYK8 2649 aaKnown RBP1□□□□□ -2.25
LEMD3-204ENST00000542032 BPTFQ12830 3046 aa0.99□□□□□ -2.25
LEMD3-204ENST00000542032 TMEM167BQ9NRX6 74 aa0.99□□□□□ -2.25
LEMD3-204ENST00000542032 BRCA2P51587 3418 aa0.98□□□□□ -2.25
LEMD3-204ENST00000542032 C2CD3Q4AC94 2353 aa0.98□□□□□ -2.25
LEMD3-204ENST00000542032 LINC01546A6NGU7 62 aa0.98□□□□□ -2.25
LEMD3-204ENST00000542032 MINOS1Q5TGZ0 78 aa0.98□□□□□ -2.25
LEMD3-204ENST00000542032 LINC00308Q8TCZ7 52 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms