RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 COL27A1Q8IZC6 1860 aaPredicted RBP7.01□□□□□ -1.29
GABRB3-204ENST00000541819 NCOR2Q9Y618 2525 aa7□□□□□ -1.29
GABRB3-204ENST00000541819 LCA10Q71F78 164 aa7□□□□□ -1.29
GABRB3-204ENST00000541819 SPRR4Q96PI1 79 aa7□□□□□ -1.29
GABRB3-204ENST00000541819 PSORS1C2Q9UIG4 136 aa7□□□□□ -1.29
GABRB3-204ENST00000541819 KLKP1Q107X0 134 aa6.99□□□□□ -1.29
GABRB3-204ENST00000541819 KTN1-AS1Q86SY8 53 aa6.99□□□□□ -1.29
GABRB3-204ENST00000541819 A0A0G2JQZ4 141 aa6.99□□□□□ -1.29
GABRB3-204ENST00000541819 A0A1W2PNN7 141 aa6.99□□□□□ -1.29
GABRB3-204ENST00000541819 CAMK2N1Q7Z7J9 78 aa6.99□□□□□ -1.29
GABRB3-204ENST00000541819 KLK9Q2XQG4 91 aa6.98□□□□□ -1.29
GABRB3-204ENST00000541819 M0R2T5 61 aa6.98□□□□□ -1.29
GABRB3-204ENST00000541819 CD164Q04900 197 aa6.98□□□□□ -1.29
GABRB3-204ENST00000541819 C2CD3Q4AC94 2353 aa6.96□□□□□ -1.3
GABRB3-204ENST00000541819 SPANXA2-OT1Q8N9U9 137 aa6.95□□□□□ -1.3
GABRB3-204ENST00000541819 CNBPP62633 177 aaKnown RBP6.94□□□□□ -1.3
GABRB3-204ENST00000541819 Q1T7F1 81 aa6.92□□□□□ -1.3
GABRB3-204ENST00000541819 IGLV7-46A0A075B6I9 117 aa6.91□□□□□ -1.3
GABRB3-204ENST00000541819 PRR26Q8N8Z3 221 aa6.91□□□□□ -1.3
GABRB3-204ENST00000541819 CHD8Q9HCK8 2581 aa6.91□□□□□ -1.3
GABRB3-204ENST00000541819 LINC00612Q8N6U2 182 aa6.9□□□□□ -1.3
GABRB3-204ENST00000541819 H7BZZ5 65 aa6.89□□□□□ -1.31
GABRB3-204ENST00000541819 KRTAP10-3P60369 221 aa6.89□□□□□ -1.31
GABRB3-204ENST00000541819 A0A1W2PNM2 257 aa6.87□□□□□ -1.31
GABRB3-204ENST00000541819 HRES1P13985 223 aa6.87□□□□□ -1.31
GABRB3-204ENST00000541819 CASC10Q5T4H9 136 aa6.87□□□□□ -1.31
GABRB3-204ENST00000541819 ZNF462Q96JM2 2506 aa6.87□□□□□ -1.31
GABRB3-204ENST00000541819 JMJD1CQ15652 2540 aa6.86□□□□□ -1.31
GABRB3-204ENST00000541819 EIF4EBP3O60516 100 aaPredicted RBP6.86□□□□□ -1.31
GABRB3-204ENST00000541819 A0A1B0GU33 70 aa6.85□□□□□ -1.31
GABRB3-204ENST00000541819 GIG44P09565 113 aaPredicted RBP6.85□□□□□ -1.31
GABRB3-204ENST00000541819 IGF2RP11717 2491 aa6.85□□□□□ -1.31
GABRB3-204ENST00000541819 LRRK2Q5S007 2527 aa6.84□□□□□ -1.31
GABRB3-204ENST00000541819 S4R3F8 94 aa6.82□□□□□ -1.32
GABRB3-204ENST00000541819 CSAG1Q6PB30 78 aa6.8□□□□□ -1.32
GABRB3-204ENST00000541819 TNP2Q05952 138 aa6.8□□□□□ -1.32
GABRB3-204ENST00000541819 ZFYVE26Q68DK2 2539 aa6.8□□□□□ -1.32
GABRB3-204ENST00000541819 A0A096LNT2 108 aa6.78□□□□□ -1.32
GABRB3-204ENST00000541819 DMAC1Q96GE9 116 aa6.77□□□□□ -1.33
GABRB3-204ENST00000541819 FAM229BQ4G0N7 80 aa6.77□□□□□ -1.33
GABRB3-204ENST00000541819 ZCCHC13Q8WW36 166 aaKnown RBP6.75□□□□□ -1.33
GABRB3-204ENST00000541819 A0A0A0MQY5 61 aa6.75□□□□□ -1.33
GABRB3-204ENST00000541819 PIEZO2Q9H5I5 2752 aa6.74□□□□□ -1.33
GABRB3-204ENST00000541819 MYO9AB2RTY4 2548 aa6.74□□□□□ -1.33
GABRB3-204ENST00000541819 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.71□□□□□ -1.33
GABRB3-204ENST00000541819 Q75L30 129 aa6.71□□□□□ -1.33
GABRB3-204ENST00000541819 OCR1Q9BZK8 76 aa6.71□□□□□ -1.33
GABRB3-204ENST00000541819 R4GN34 69 aa6.7□□□□□ -1.34
GABRB3-204ENST00000541819 SEC61BP60468 96 aaKnown RBP6.7□□□□□ -1.34
GABRB3-204ENST00000541819 ABCA12Q86UK0 2595 aa6.69□□□□□ -1.34
GABRB3-204ENST00000541819 FASNP49327 2511 aaKnown RBP6.67□□□□□ -1.34
GABRB3-204ENST00000541819 FN1P02751 2386 aaKnown RBP6.67□□□□□ -1.34
GABRB3-204ENST00000541819 PCSK5Q92824 1860 aa6.67□□□□□ -1.34
GABRB3-204ENST00000541819 PLAC8Q9NZF1 115 aa6.66□□□□□ -1.34
GABRB3-204ENST00000541819 LINC01558Q9Y6Z2 57 aa6.65□□□□□ -1.34
GABRB3-204ENST00000541819 SPINK7P58062 85 aa6.65□□□□□ -1.35
GABRB3-204ENST00000541819 MMP24-AS1A0A0U1RRL7 71 aa6.64□□□□□ -1.35
GABRB3-204ENST00000541819 EP400Q96L91 3159 aa6.63□□□□□ -1.35
GABRB3-204ENST00000541819 KRTAP1-3Q8IUG1 177 aa6.63□□□□□ -1.35
GABRB3-204ENST00000541819 TLN1Q9Y490 2541 aaKnown RBP6.63□□□□□ -1.35
GABRB3-204ENST00000541819 Q8N9P0 234 aaPredicted RBP6.62□□□□□ -1.35
GABRB3-204ENST00000541819 WIPF1O43516 503 aa6.62□□□□□ -1.35
GABRB3-204ENST00000541819 Q5W150 140 aa6.61□□□□□ -1.35
GABRB3-204ENST00000541819 KRTAP1-1Q07627 177 aa6.6□□□□□ -1.35
GABRB3-204ENST00000541819 PLAC4Q8WY50 150 aa6.6□□□□□ -1.35
GABRB3-204ENST00000541819 F8P00451 2351 aa6.6□□□□□ -1.35
GABRB3-204ENST00000541819 Q5VSD8 79 aa6.59□□□□□ -1.35
GABRB3-204ENST00000541819 TLN2Q9Y4G6 2542 aa6.58□□□□□ -1.36
GABRB3-204ENST00000541819 M0QZ58 72 aa6.56□□□□□ -1.36
GABRB3-204ENST00000541819 PRAC1Q96KF2 57 aa6.55□□□□□ -1.36
GABRB3-204ENST00000541819 ROMO1P60602 79 aa6.55□□□□□ -1.36
GABRB3-204ENST00000541819 RPL37P61927 97 aaKnown RBP6.55□□□□□ -1.36
GABRB3-204ENST00000541819 H1FX-AS1Q4G0G2 97 aa6.54□□□□□ -1.36
GABRB3-204ENST00000541819 POLQO75417 2590 aa6.54□□□□□ -1.36
GABRB3-204ENST00000541819 USP9XQ93008 2570 aaPredicted RBP6.51□□□□□ -1.37
GABRB3-204ENST00000541819 MTORP42345 2549 aa6.51□□□□□ -1.37
GABRB3-204ENST00000541819 SPRR1AP35321 89 aa6.51□□□□□ -1.37
GABRB3-204ENST00000541819 H3BS24 57 aa6.5□□□□□ -1.37
GABRB3-204ENST00000541819 SPRR1BP22528 89 aa6.5□□□□□ -1.37
GABRB3-204ENST00000541819 LINC00472Q9H8W2 130 aa6.49□□□□□ -1.37
GABRB3-204ENST00000541819 OXTP01178 125 aa6.48□□□□□ -1.37
GABRB3-204ENST00000541819 Q5VV11 94 aa6.47□□□□□ -1.37
GABRB3-204ENST00000541819 SPTBN4Q9H254 2564 aa6.47□□□□□ -1.37
GABRB3-204ENST00000541819 FP248Q71RG6 208 aaPredicted RBP6.47□□□□□ -1.37
GABRB3-204ENST00000541819 ANKRD17O75179 2603 aaKnown RBP6.46□□□□□ -1.38
GABRB3-204ENST00000541819 SETD2Q9BYW2 2564 aaPredicted RBP6.45□□□□□ -1.38
GABRB3-204ENST00000541819 LCE6AA0A183 80 aa6.45□□□□□ -1.38
GABRB3-204ENST00000541819 ADM2Q7Z4H4 148 aa6.45□□□□□ -1.38
GABRB3-204ENST00000541819 CR1P17927 2039 aa6.45□□□□□ -1.38
GABRB3-204ENST00000541819 PKD1L2Q7Z442 2459 aa6.45□□□□□ -1.38
GABRB3-204ENST00000541819 ANKRD11Q6UB99 2663 aaPredicted RBP6.45□□□□□ -1.38
GABRB3-204ENST00000541819 CEP295Q9C0D2 2601 aa6.44□□□□□ -1.38
GABRB3-204ENST00000541819 FLNBO75369 2602 aaKnown RBP6.42□□□□□ -1.38
GABRB3-204ENST00000541819 Q5XG85 94 aa6.41□□□□□ -1.38
GABRB3-204ENST00000541819 KRTAP10-1P60331 282 aa6.41□□□□□ -1.38
GABRB3-204ENST00000541819 KRTAP26-1Q6PEX3 210 aa6.41□□□□□ -1.38
GABRB3-204ENST00000541819 Q8NDZ9 215 aa6.39□□□□□ -1.39
GABRB3-204ENST00000541819 ACANP16112 2415 aa6.37□□□□□ -1.39
GABRB3-204ENST00000541819 USP9YO00507 2555 aaPredicted RBP6.37□□□□□ -1.39
GABRB3-204ENST00000541819 Q6ZR54 194 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms